Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag0344 ATGAAAGCCATACAAAACAGGCTCATTCAAAAAACAAGAGCTATATGTTTCCTTACCTATATTCTCCTGTTTATGAACCTCTCCCATGCTTATGACGAAGAAGAAACTCCGTTGCAAACCTACATTGTCCATCTTGAAAAGCCTGAAACCAGAGCAATCCAAACAACCCAGTCCTATGATACCATCTCATGGTACCATTCCTTCTTACACGACACAATCTCAAGCTCCTCTAGCCTGCAACAAAAACGTCTGATCTACCCCTACAAAAATGCCATAACCGGTTTTGCTGCAAGATTGACTGAAAATGAAGCCAAATCCATGGAATCGAAAAAAGGAGTCATCTTAATCCGTAGAGAAAATACCTTATCTTTGCACACAACTCATAGCCCCAACTTCTTGGGACTATACCAGGGAATGGGGTTTTGGAAAGATTCAAATTTCGGTAAAGGTATGATTATAGGAATCCTCGATACGGGAATTGACCCCAACCATCCTTCATTTAATGATGAAAATATCCCTCCCCCACCTCCAAAATGGAAAGGAAAGTGCGAATTTCTAACCCCACTATCATGTAATAACAAGATCATAGGGGCGAGAACTTTTCAGGGCACCAACAACAAAGTGAAGCCGCCAATCGATGAAATCGGGCACGGGACCCACACTTCAAGCATAGCAGCCGGGAATTTCGTGAAGGGGGCCAATGTTCTAGGCAATGCTTACGGAACGGCAAGCGGGTTAGCCCCATTAGCCCACCTAGCCATCTATAAAACTTGTTCAAAAGAAGGTTGTCCAGAAAGCGACGTCTTAGCCGCACTTGATGCCGCAATTGAGGACGGGGTTGATATTCTCTCGATCTCTCTAGGGTCAAGTCCGACAAATTCTTTCTTACACGACGTAGTTGCTTTGGGCACTTTCAAAGCAATGGAAAAGGGTATTTTCGTAAGTTCCTCAGCAGGGAATCTAGGACCATTCAAAGGAAGCGTTGAAAACACGGCTCCATGGGTCCTTACGGTTGGATCTAGCACCACGGACCGAACCATTAAAGCCACAGCCCGACTCGGGAATGGACAAGACCTAGAAGGCGAATCACTAAACCAACTTATAAACTTCACCTCTAATCTACGCCCCCTAATAAATCCAACAACATGCAATTTCGAAACAGTCAAGACCCTAGATGTTCAAGGGAAGATCATATTGTGTCAAGGGAGTGGAGATTTTGGGACTCAAACAGGGGTCGAAGTGAAAAAAGCTGGAGGGGCGGGCTTGATATTATATAATATTGAGCTTGACGGGTTCAGCATTCCAGAACAATACCATGTCATTCCGGCTACTTTTGTGAGTTATGCAGACGGTTTGAAAATCAAATCCTACATAAACTCTACCCCTAACCCTTTAGCGACGATTCTATTTCAAGGAACACATATCGGAAAACCTTCTTCCCCTATGGTTTCTGCCACATCATCTAGAGGACCCAATTTAGTAAGCCCTGAAATCCTAAAACCAGATATCATTGCACCTGGACTTAACATTCTAGCAGCATGGCCATTTTCCCTAGAAATAAACAACAATACCAACACAAATTCTTCAAAGGAATTCAATTTCAATATAATTTCAGGAACTTCAATGGCATGTCCACACTTATCTGGAATCGCAGCTTTACTCAAGAGCTCCCATCCGGACTGGTCGCCATCCGAGATCAAATCGGCGATGATGACGTCATCCGACGTGGTTAACCTAGAAGGAAAGCCAATAATCGATCAATTACATGAACCAGCGAGCGTTTTCGAGATGGGAGCAGGGGAGGTGAATCCGTCAAGGGCGAACGATCCAGGACTTCTTTACGGCATTTCATCGAGCGATTACCGTGCGTACCTATGCGGGATGAATCTGACGGATCAGGAGATAGGTTTGATTGTGCATCGTAGAGTAAGGTGCTACGGCGGGGGGAGGATTGAGGCGGCGGACCTGAACTATCCGGCGATCGGGGTTGAATTGAGGGTGCATGAGTCAAAGACAGTTAAGAGGAGTGTTGTGAATGTAGGGAGAGAGGGGGAGAGTTATAGGGTTGAGGTTTTGGGCATGGAAGGGGTTGAGGTTGATGTGACGCCGAAGGAGATGGTTTTCAGAGAGGCGAGGGAGAAGATAAACTATACGCTGTCGTTCAAGCGTTTGAATGTGGGTGTTGATAATGAAGAAGGTGGTGGTGGGCCGAGCGGGCCGACATTTGTTTATGGGTATTTGAGATGGGTTTCTGACTGGCATTCTGTTAGAAGCCCAATAGCTGTCATTTTTAAGTAA 2298 45.21 MKAIQNRLIQKTRAICFLTYILLFMNLSHAYDEEETPLQTYIVHLEKPETRAIQTTQSYDTISWYHSFLHDTISSSSSLQQKRLIYPYKNAITGFAARLTENEAKSMESKKGVILIRRENTLSLHTTHSPNFLGLYQGMGFWKDSNFGKGMIIGILDTGIDPNHPSFNDENIPPPPPKWKGKCEFLTPLSCNNKIIGARTFQGTNNKVKPPIDEIGHGTHTSSIAAGNFVKGANVLGNAYGTASGLAPLAHLAIYKTCSKEGCPESDVLAALDAAIEDGVDILSISLGSSPTNSFLHDVVALGTFKAMEKGIFVSSSAGNLGPFKGSVENTAPWVLTVGSSTTDRTIKATARLGNGQDLEGESLNQLINFTSNLRPLINPTTCNFETVKTLDVQGKIILCQGSGDFGTQTGVEVKKAGGAGLILYNIELDGFSIPEQYHVIPATFVSYADGLKIKSYINSTPNPLATILFQGTHIGKPSSPMVSATSSRGPNLVSPEILKPDIIAPGLNILAAWPFSLEINNNTNTNSSKEFNFNIISGTSMACPHLSGIAALLKSSHPDWSPSEIKSAMMTSSDVVNLEGKPIIDQLHEPASVFEMGAGEVNPSRANDPGLLYGISSSDYRAYLCGMNLTDQEIGLIVHRRVRCYGGGRIEAADLNYPAIGVELRVHESKTVKRSVVNVGREGESYRVEVLGMEGVEVDVTPKEMVFREAREKINYTLSFKRLNVGVDNEEGGGGPSGPTFVYGYLRWVSDWHSVRSPIAVIFK 765
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 1974723 1977074 - Conep08aG0036000.1 Cone8ag0344 442893

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag0344 765 Pfam PA domain 379 454 IPR003137 -
Cone8ag0344 765 SUPERFAMILY Subtilisin-like 124 612 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cone8ag0344 765 CDD Peptidases_S8_3 124 575 IPR034197 -
Cone8ag0344 765 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 26 125 IPR037045 -
Cone8ag0344 765 Pfam Fibronectin type-III domain 655 762 IPR041469 -
Cone8ag0344 765 CDD PA_subtilisin_like 350 468 - -
Cone8ag0344 765 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 40 760 IPR045051 -
Cone8ag0344 765 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 153 164 IPR023827 -
Cone8ag0344 765 PRINTS Subtilisin serine protease family (S8) signature 213 226 IPR015500 -
Cone8ag0344 765 PRINTS Subtilisin serine protease family (S8) signature 538 554 IPR015500 -
Cone8ag0344 765 PRINTS Subtilisin serine protease family (S8) signature 148 167 IPR015500 -
Cone8ag0344 765 Gene3D Peptidase S8/S53 domain 150 621 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cone8ag0344 765 Pfam Peptidase inhibitor I9 40 125 IPR010259 -
Cone8ag0344 765 ProSiteProfiles Serine proteases, subtilase domain profile. 121 608 - -
Cone8ag0344 765 Gene3D - 625 764 - -
Cone8ag0344 765 Gene3D - 344 476 - -
Cone8ag0344 765 Pfam Subtilase family 148 600 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag0344 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone8ag0344 Cone-Chr8:1974723 Cone9ag1364 Cone-Chr9:10213372 1.26E-166 dispersed
Cone1ag1115 Cone-Chr1:55524803 Cone8ag0344 Cone-Chr8:1974723 1.75E-164 wgd
Cone5ag0823 Cone-Chr5:3522901 Cone8ag0344 Cone-Chr8:1974723 2.38E-161 wgd
Cone6ag0731 Cone-Chr6:3679897 Cone8ag0344 Cone-Chr8:1974723 3.13E-246 wgd
Cone8ag0344 Cone-Chr8:1974723 Cone9ag0735 Cone-Chr9:3498128 1.90E-233 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g434 . . . . . . . . . Cmo16g01045 Cma02g01498 . Car02g01261 . . . Cpe05g00291 . . . . . . . . . . . . . . Cone8ag0344 . . . . Csa05g00344 Chy09g01163 . . . Bda07g00509 . . . . . . Cmo02g01539 . . . . . . . Bhi12g00343 . . . Hepe06g1605 . Lcy12g1726 . . . . . . . Lsi09g00337 . . Cme09g01695
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002315 3 2 1 2 2 2 1 1 3 3 2 2 1 2 2 1 2 3 1 1 2 8 1 0 2 5 1 1 2 3 62