Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone8ag0352 | ATGGCAACTAGTGGAGGTAGTAGCTATAGAAATGGTGGTACTTCGAGGAATTCTCTCAAGCTCGATAATAATAAGGCTCTCTCTGTTAATTCCAACCCTTCCAAGCCTTCTGTCAAATCCAAGTCCGGTCTCCGTCGCAGCAGCCCTGCCGCACTCGGCGGCGTTACTCCCTCCACCTCCACCGGAACTGTCAAGGATAATGCTGGAGTCCTTGGAAGGGTCAGAGTAGCTGTTAGATTACGGCCCCAGAATCCCGAAGAATTAGTAGCCGATGCTGATTTTGCTGATTGTGTAGAAGTACAGCCAGAGCTTAAAAGGTTGAAACTTCGGAAGAACAATTGGGATTCGGATACTTTCGAGTTTGACGAAGTGCTAACTGAGTTTGCTTCCCAAAAACGTGTTTATGAAGTTGTAGCAAAGCCTGTTGTAGAGAGTGTATTAGAAGGTTACAATGGAACAGTTATGGCTTATGGCCAAACCGGCACGGGCAAAACATACACTCTTGGAAGACTCGGAGAAGAAGACACATCCGATCGAGGAATAATGGTCCGAGCTATGGAGCACATTTTGGCCGAGGTCTCTTTGGAATCAGACTCTGTTTCAGTCTCCTATATGCAGCTTTATATGGAGACTATACAAGACCTTCTAGACCCCACAAACGATAATATCTCTATCGTGGAAGACCTTAAAACAGGAGATGTTTCTCTACCAGGAGCTAGGCTAGTTGAGATAAGGGACCAGAAGAGCTTTGTGGAACTTCTTCGGCTAGGAGAAGCTCACCGCTTTGCAGCAAATACTAAGTTGAATACTGAATCTTCTCGTAGCCATGCTATTCTAATGGTACATGTAAAGAGGTCTGTCAAGGAAAATGGTGGCAATGCTCATATGGGAAAGACTTTGAAACCTCCTATGGTCCGGAAGGGGAAGTTAGTAGTAGTGGATCTTGCTGGTTCTGAGCGCATTGATAAATCAGGGAGTGAAGGAAGAGCACTTGAGGAAGCGAAATCGATCAATCTCTCTTTAAGTGCTTTGGGGAAATGCATCAATGCAATAGCTGAGAATAGTCCACATGTTCCTGTCCGGGATTCAAAGCTTACGAGGTTACTTAGAGATTCTTTTGGAGGCACAGCTAGGACTTCATTGGTTATTACGATCGGCCCATCTCCACGTCATAGAGGAGAGACTTCAAGTACTATAATGTTTGGTCAGCGAGCTATGAAGGTGGAAAATATGTTGAAAATAAAGGAAGAGTTTGATTACAAAAGCTTATCAAGAAGGCTAGATATACAACTAGACAAGCTCATTGCAGAGCATGAAAGACAACAAAAAGCATTTGAGGATGAAATTGAAAGAGTAACGATAGAAGCACGGAATCGGATTTCTGAGGTTGAAAGAAACTATGAAGATGCACTAGAAGAGGAAAGATTGAAATATCAGAAAGACTATATGGAATCAATAAGGAAGCTTGAAGATCAATTAGTTGTGAATCAACGCATGCATGGAAGGGAAAAAACCATGAACGAATCTAGAGATGATGGATCAATTATGCCACCTAATGGAGAGCGTTCAATGATTCCTTCTCTGGAGGAAGTTGCTGAGCTAAAGAAGTTGCTTAAAAAAGAATCCCATTCGAGAAAGGCTGCCGAAGAAGAAGCCAGAAGTCTAAAAAGTCGAGTTTCTCAATTGGAAATGGCAGAGAAATCTGGAAACTCGGAAATTGTAAAGCTTCGAAAGATGTTGCAAGATGAATCTAATAGAAAAGAGAAACTTGAGGAAGAAATAGCTGTACTTCAAAGCCAGTTGTTGCAATTGAGTTTTGAAGCTGATGAGACTAGAAGAGAACTGGATGGAGGTGAGTCTGGTAACATTTTGGGTGCTCTAGATTCTCTCATGTCTCATGCTAGAAGCCCTCAGCCTAAAGATTTGGGGAATGGGGAGAAAGCCTCAATGGCTAAACTCTTCGAGCAAGTGGGACTGCAAAAAATCTTGTCATTATTAGAAGCTGAAGATTCTGATGTCCGAATTCATGCTGTGAAAGTTGTGGCAAATCTAGCTGCTGAAGAAACAAATCAGCAGAAGATTGTAGAAGCAGGAGGTCTTACGTCATTGCTAATGCTTCTTAGAAGCTCGGACGATGAGACTATACAAAGAGTTGCTGCAGGTGCAATTGCGAATCTTGCAATGAATGAAACCAACCAAGAGCTGATAATGGCTCAAGGAGGCATCAATTTACTGTCCATGGCAGCAGCCCATGCCGAGGATCCACAGACCCTCCGAATGGTTGCCGGAGCAATTGCAAATCTCTGTGGAAACGATAAATTGCAGAGAAAGCTAAGGGGTGAAGGTGGTATTAAGGCATTACTAGGTATGGTGAGATGCAAACATCCGGATGTTATTGCACAAGTTGCTCGTGGAATTGCTAATTTTGCTAAATGTGAGTCTAGAGCATCTGTGCAAGGGGTTAAGACAGGAAAATCTCTACTAATCGAGGATGGAGCATTGCCTTGGATTGTACAAAATGCCAACAACGAAGCCTCAGCAATAAGGCGACATATCGAGCTTGCTCTCTGCCACTTGGCACAACACGAAGTGAATGCAAAAGACATGATCGTAGAAGGTGCCTTATGGGAGCTGGTCCATATAGCTAGGGATTGTTCAAGGGAAGATATAAGGACCCTTGCTCATCGGACACTTACTTCAAGTCCTACTTTCCAAGCCGAGCTCAGGCGGCTACACGTCGACTATTAA | 2748 | 43.45 | MATSGGSSYRNGGTSRNSLKLDNNKALSVNSNPSKPSVKSKSGLRRSSPAALGGVTPSTSTGTVKDNAGVLGRVRVAVRLRPQNPEELVADADFADCVEVQPELKRLKLRKNNWDSDTFEFDEVLTEFASQKRVYEVVAKPVVESVLEGYNGTVMAYGQTGTGKTYTLGRLGEEDTSDRGIMVRAMEHILAEVSLESDSVSVSYMQLYMETIQDLLDPTNDNISIVEDLKTGDVSLPGARLVEIRDQKSFVELLRLGEAHRFAANTKLNTESSRSHAILMVHVKRSVKENGGNAHMGKTLKPPMVRKGKLVVVDLAGSERIDKSGSEGRALEEAKSINLSLSALGKCINAIAENSPHVPVRDSKLTRLLRDSFGGTARTSLVITIGPSPRHRGETSSTIMFGQRAMKVENMLKIKEEFDYKSLSRRLDIQLDKLIAEHERQQKAFEDEIERVTIEARNRISEVERNYEDALEEERLKYQKDYMESIRKLEDQLVVNQRMHGREKTMNESRDDGSIMPPNGERSMIPSLEEVAELKKLLKKESHSRKAAEEEARSLKSRVSQLEMAEKSGNSEIVKLRKMLQDESNRKEKLEEEIAVLQSQLLQLSFEADETRRELDGGESGNILGALDSLMSHARSPQPKDLGNGEKASMAKLFEQVGLQKILSLLEAEDSDVRIHAVKVVANLAAEETNQQKIVEAGGLTSLLMLLRSSDDETIQRVAAGAIANLAMNETNQELIMAQGGINLLSMAAAHAEDPQTLRMVAGAIANLCGNDKLQRKLRGEGGIKALLGMVRCKHPDVIAQVARGIANFAKCESRASVQGVKTGKSLLIEDGALPWIVQNANNEASAIRRHIELALCHLAQHEVNAKDMIVEGALWELVHIARDCSREDIRTLAHRTLTSSPTFQAELRRLHVDY | 915 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 2010925 | 2017515 | + | Conep08aG0036800.1 | Cone8ag0352 | 442901 |
Annotation
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone8ag0352 | 915 | ProSiteProfiles | Kinesin motor domain profile. | 73 | 408 | IPR001752 | GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro) | |
| Cone8ag0352 | 915 | MobiDBLite | consensus disorder prediction | 502 | 523 | - | - | |
| Cone8ag0352 | 915 | FunFam | Kinesin-like protein | 627 | 903 | - | - | |
| Cone8ag0352 | 915 | Pfam | Kinesin motor domain | 79 | 408 | IPR001752 | GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro) | |
| Cone8ag0352 | 915 | SMART | kinesin_4 | 71 | 416 | IPR001752 | GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro) | |
| Cone8ag0352 | 915 | MobiDBLite | consensus disorder prediction | 1 | 44 | - | - | |
| Cone8ag0352 | 915 | Coils | Coil | 573 | 607 | - | - | |
| Cone8ag0352 | 915 | Gene3D | - | 748 | 906 | IPR011989 | - | |
| Cone8ag0352 | 915 | FunFam | Kinesin-like protein | 65 | 438 | - | - | |
| Cone8ag0352 | 915 | MobiDBLite | consensus disorder prediction | 540 | 566 | - | - | |
| Cone8ag0352 | 915 | ProSitePatterns | Kinesin motor domain signature. | 308 | 319 | IPR019821 | GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro) | |
| Cone8ag0352 | 915 | MobiDBLite | consensus disorder prediction | 52 | 66 | - | - | |
| Cone8ag0352 | 915 | SUPERFAMILY | ARM repeat | 644 | 899 | IPR016024 | - | |
| Cone8ag0352 | 915 | PRINTS | Kinesin heavy chain signature | 266 | 283 | IPR001752 | GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro) | |
| Cone8ag0352 | 915 | PRINTS | Kinesin heavy chain signature | 149 | 170 | IPR001752 | GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro) | |
| Cone8ag0352 | 915 | PRINTS | Kinesin heavy chain signature | 309 | 327 | IPR001752 | GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro) | |
| Cone8ag0352 | 915 | PRINTS | Kinesin heavy chain signature | 358 | 379 | IPR001752 | GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro) | |
| Cone8ag0352 | 915 | Coils | Coil | 531 | 565 | - | - | |
| Cone8ag0352 | 915 | Gene3D | - | 564 | 747 | IPR011989 | - | |
| Cone8ag0352 | 915 | Coils | Coil | 431 | 473 | - | - | |
| Cone8ag0352 | 915 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 73 | 443 | IPR027417 | - | |
| Cone8ag0352 | 915 | MobiDBLite | consensus disorder prediction | 1 | 66 | - | - | |
| Cone8ag0352 | 915 | MobiDBLite | consensus disorder prediction | 540 | 557 | - | - | |
| Cone8ag0352 | 915 | PANTHER | KINESIN-LIKE PROTEIN KIF11 | 73 | 595 | IPR047149 | GO:0005876(PANTHER)|GO:0008574(PANTHER)|GO:0051231(PANTHER)|GO:0072686(PANTHER)|GO:0090307(PANTHER) | |
| Cone8ag0352 | 915 | Pfam | Armadillo/beta-catenin-like repeat | 690 | 727 | IPR000225 | GO:0005515(InterPro) | |
| Cone8ag0352 | 915 | Gene3D | Kinesin motor domain | 65 | 438 | IPR036961 | - | |
| Cone8ag0352 | 915 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 657 | 699 | IPR000225 | GO:0005515(InterPro) | |
| Cone8ag0352 | 915 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 698 | 741 | IPR000225 | GO:0005515(InterPro) | |
| Cone8ag0352 | 915 | CDD | KISc | 73 | 406 | - | - | |
| Cone8ag0352 | 915 | SMART | arm_5 | 647 | 686 | IPR000225 | GO:0005515(InterPro) | |
| Cone8ag0352 | 915 | SMART | arm_5 | 771 | 811 | IPR000225 | GO:0005515(InterPro) | |
| Cone8ag0352 | 915 | SMART | arm_5 | 729 | 770 | IPR000225 | GO:0005515(InterPro) | |
| Cone8ag0352 | 915 | SMART | arm_5 | 687 | 728 | IPR000225 | GO:0005515(InterPro) |
Pathway
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone8ag0352 | - | - | - | - | 0.0 |
Dupl-types
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone8ag0352 | Cone-Chr8:2010925 | Cone19ag1148 | Cone-Chr19:8163943 | 1.09E-49 | dispersed | |
| Cone14ag0310 | Cone-Chr14:1441029 | Cone8ag0352 | Cone-Chr8:2010925 | 0 | wgd | |
| Cone15ag0336 | Cone-Chr15:1560648 | Cone8ag0352 | Cone-Chr8:2010925 | 0 | wgd |
Deco-Alignment
| Select | Vvi1 | Blo1 | Blo2 | Bda1 | Bda2 | Bpe1 | Bpe2 | Bma1 | Bma2 | Cmo1 | Cmo2 | Cma1 | Cma2 | Car1 | Car2 | Sed1 | Cpe1 | Cpe2 | Bhi1 | Tan1 | Cmetu1 | Lac1 | Hepe1 | Mch1 | Lcy1 | Cla1 | Cam1 | Cec1 | Cco1 | Clacu1 | Cmu1 | Cre1 | Cone1 | Cone2 | Cone3 | Cone4 | Lsi1 | Csa1 | Chy1 | Cme1 | Blo3 | Blo4 | Bda3 | Bda4 | Bpe3 | Bpe4 | Bma3 | Bma4 | Sed2 | Cmo3 | Cmo4 | Cma3 | Cma4 | Car3 | Car4 | Cpe3 | Cpe4 | Bhi2 | Tan2 | Cmetu2 | Lac2 | Hepe2 | Mch2 | Lcy2 | Cla2 | Cam2 | Cec2 | Cco2 | Clacu2 | Cmu2 | Cre2 | Lsi2 | Csa2 | Chy2 | Cme2 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Vvi2g464 | . | . | . | . | . | . | . | . | . | . | . | Cma15g01176 | . | Car15g01064 | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | Cone8ag0352 | . | . | . | . | . | Chy09g01147 | . | . | . | . | . | . | . | . | . | . | . | Cmo15g01237 | . | . | Car06g00966 | . | . | . | Bhi12g00358 | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | Cme09g01679 |
Syn-Orthogroups
| Select | Orthogroup | Bda | Bhi | Blo | Bma | Bpe | Cam | Car | Cco | Cec | Chy | Cla | Clacu | Cma | Cme | Cmetu | Cmo | Cmu | Cone | Cpe | Cre | Csa | HCH | Hepe | Lac | Lcy | Lsi | Mch | Sed | Tan | Vvi | Total |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| OG0001054 | 3 | 5 | 3 | 2 | 3 | 2 | 5 | 2 | 2 | 2 | 2 | 2 | 4 | 2 | 2 | 4 | 2 | 3 | 4 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 5 | 2 | 3 | 80 |