Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone8ag0353 | ATGGATCATTCCCATTCTCTTCCACCTCCATTTCACACAAGAGATTACCATCTACAACATCAATTCGGCCACCATCAACAACAACAAAATTCCGAGGAAGAGCAAAGCGGTAGTAGTGGCCTAAGCCGGGCCCAGAAACGTGAAAGAGATGACAACACCAACGGCAGCGATCATCATCATCAAGGCGGTAATGATCTCCCTGGTAAGTCTGGGGAAGGAGAAAGCACGAGAAGGCCTCGTGGTAGGCCTGCTGGATCCAAGAACAAGCCCAAACCACCCATCATCATCACGCGCGATAGTGCAAACGCCCTCCGAACCCACGTGATTGAAGTCACTGATGGGTGTGATATCGTCGAATGTGTGGCCACTTTTGCCAGGCGGCGACAAAGAGGAGTCTGCATTATGAGCGGGACCGGAACGGTTACCAACGTGACATTAAGACAACCGGCATCACCAGGAGCAATAGTGACATTACATGGCCGGTTCGAGATCCTATCCCTAGCAGGGTCATTTTTACCACCTCCAGCTCCGCCAGCAGCAACAGGGTTGACCATATATCTGGCTGGGGGACAAGGCCAGGTGGTGGGAGGGAGCGTAGTTGGGATGTTGATGGCATCAGGACCCGTGGTGATTATGGCGGCATCATTCAGTAATGCTGCTTACGAGCGGCTTCCTTTGGAGGATGATGAGGGTCAAGGGCTAGCAATGCAAGGTGGTGGCTCAATTGGATCACCTAGTGGTGGTGGTGGTGGAGGAGCTGGTGGCCAACAACAACAAACACCACAACAACTTTTAGGGGATGCAAGTGGGCCAGTGTATCATGGAATGCCTCAAAATCTACTCAACTCAATTCAAATGCCAAATGAGGCAGCTTATTGGGCTACAGGTCGGCCTCCATACTGA | 903 | 51.72 | MDHSHSLPPPFHTRDYHLQHQFGHHQQQQNSEEEQSGSSGLSRAQKRERDDNTNGSDHHHQGGNDLPGKSGEGESTRRPRGRPAGSKNKPKPPIIITRDSANALRTHVIEVTDGCDIVECVATFARRRQRGVCIMSGTGTVTNVTLRQPASPGAIVTLHGRFEILSLAGSFLPPPAPPAATGLTIYLAGGQGQVVGGSVVGMLMASGPVVIMAASFSNAAYERLPLEDDEGQGLAMQGGGSIGSPSGGGGGGAGGQQQQTPQQLLGDASGPVYHGMPQNLLNSIQMPNEAAYWATGRPPY | 300 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 2019529 | 2020431 | - | Conep08aG0036900.1 | Cone8ag0353 | 442902 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone8ag0353 | 300 | MobiDBLite | consensus disorder prediction | 230 | 272 | - | - | |
Cone8ag0353 | 300 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 105 | 217 | IPR005175 | - | |
Cone8ag0353 | 300 | PIRSF | ESCAROLA | 12 | 300 | IPR014476 | GO:0003680(InterPro) | |
Cone8ag0353 | 300 | CDD | DUF296 | 105 | 188 | IPR005175 | - | |
Cone8ag0353 | 300 | FunFam | AT-hook motif nuclear-localized protein | 104 | 231 | - | - | |
Cone8ag0353 | 300 | MobiDBLite | consensus disorder prediction | 251 | 266 | - | - | |
Cone8ag0353 | 300 | Gene3D | - | 104 | 237 | - | - | |
Cone8ag0353 | 300 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 101 | 230 | - | - | |
Cone8ag0353 | 300 | ProSiteProfiles | PPC domain profile profile. | 101 | 240 | IPR005175 | - | |
Cone8ag0353 | 300 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 32 | 300 | IPR014476 | GO:0003680(InterPro)|GO:0003680(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0010228(PANTHER) | |
Cone8ag0353 | 300 | MobiDBLite | consensus disorder prediction | 1 | 96 | - | - | |
Cone8ag0353 | 300 | MobiDBLite | consensus disorder prediction | 43 | 81 | - | - | |
Cone8ag0353 | 300 | MobiDBLite | consensus disorder prediction | 22 | 42 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone15ag0335 | Cone-Chr15:1556311 | Cone8ag0353 | Cone-Chr8:2019529 | 7.98E-99 | dispersed | |
Cone17ag1172 | Cone-Chr17:8610336 | Cone8ag0353 | Cone-Chr8:2019529 | 1.86E-53 | dispersed | |
Cone18ag1132 | Cone-Chr18:8173667 | Cone8ag0353 | Cone-Chr8:2019529 | 1.14E-96 | dispersed | |
Cone3ag1257 | Cone-Chr3:31399475 | Cone8ag0353 | Cone-Chr8:2019529 | 3.95E-69 | dispersed | |
Cone5ag0555 | Cone-Chr5:2375683 | Cone8ag0353 | Cone-Chr8:2019529 | 1.86E-78 | dispersed | |
Cone6ag1619 | Cone-Chr6:12498853 | Cone8ag0353 | Cone-Chr8:2019529 | 6.37E-75 | dispersed | |
Cone8ag0353 | Cone-Chr8:2019529 | Cone9ag0727 | Cone-Chr9:3470444 | 4.04E-117 | dispersed | |
Cone8ag0353 | Cone-Chr8:2019529 | Cone8ag0357 | Cone-Chr8:2067946 | 7.07E-23 | proximal | |
Cone12ag0347 | Cone-Chr12:1886783 | Cone8ag0353 | Cone-Chr8:2019529 | 1.18E-154 | wgd | |
Cone14ag0141 | Cone-Chr14:683830 | Cone8ag0353 | Cone-Chr8:2019529 | 5.22E-81 | wgd | |
Cone14ag0306 | Cone-Chr14:1406920 | Cone8ag0353 | Cone-Chr8:2019529 | 2.18E-19 | wgd | |
Cone15ag0149 | Cone-Chr15:720428 | Cone8ag0353 | Cone-Chr8:2019529 | 2.91E-76 | wgd | |
Cone15ag0333 | Cone-Chr15:1527904 | Cone8ag0353 | Cone-Chr8:2019529 | 1.21E-19 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone8ag0353 | - | - | - | 0.0 |