Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag0357 ATGGAGGGAAGGGAAGTTGGTGTGAGTAGTGGGGTTACAGTTGTGGAATCAGATGCTCCCTCGGCCTACCACGTGGCTCCGAGGACGGAAAACCCGGTCTCAACCGGCGGATCAGCTCCTCCTCCGACATCGGCGGCGCCGCCACAATTAGGTGTGACTCCACCGCCGGAAGGGGCGGATTTCTCAGTTCCTGGTAAGAAAAAAAGGGGTAGGCCCCGCAAATACGGACCGGACGGTAGTGTTGCTAAGGCACTTTCCCCGAAGCCGATATCATCATTGATTCCACCTCCGGTGATCGACTTCTCATCGGAGAAACGGGGCAAGATCCGTCCGGCAAGCTCCGTGAGCAAAACCAAGCATGAGATGGAGAACTTAGGTAATGGGGAATGGGTTGCTTGTTCTGTTGGTGCCAATTTCACACCCCATATCATAAACATCAATACCGGAGAGGATGTGACAATGAAGATTATATCGTTCTCTCAACAAGGGCCTCGAGCTATTTGCATTCTATCTGCTAACGGTGTGATTTCAAGTGTAACTCTTCGTCAACCGGATTCTTCCGGGGGAACTTTGACATATGAGGGTCGTTTTGAAATATTGTCCTTATCGGGCTCCTTCATGCCAAGTGATAGTGGGGGAACTAGGAGCCGATCCGGTGGTATGAGTGTATCTTTAGCAAGCCCGGACGGTCGGGTTGTTGGTGGAGGAGTAGCGGGCCTATTAGTAGCTGCAAGTCCCGTACAGATTGTGGTAGGCAGTTTTCTGTCGGGTAACCAACACGAGCAGAAACCGAAAAAACCGAAACATGATAACACCGTATCAACAGCCACAACACCTACAGCTGCAGTTCCGATTTCAAGCTCGGATCCAAAGTCAACCATATTGACCTCCTCCTCATCCTTCCGAGTTGATAATTGGACCTCATTGCCCTCCGATTCCAGAGATAAATCCACTAATACTAATATATCTTTCCCCGGCACGTAA 984 50.51 MEGREVGVSSGVTVVESDAPSAYHVAPRTENPVSTGGSAPPPTSAAPPQLGVTPPPEGADFSVPGKKKRGRPRKYGPDGSVAKALSPKPISSLIPPPVIDFSSEKRGKIRPASSVSKTKHEMENLGNGEWVACSVGANFTPHIININTGEDVTMKIISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPSDSGGTRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQIVVGSFLSGNQHEQKPKKPKHDNTVSTATTPTAAVPISSSDPKSTILTSSSSFRVDNWTSLPSDSRDKSTNTNISFPGT 327
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 2067946 2070634 + Conep08aG0037300.1 Cone8ag0357 442906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag0357 327 MobiDBLite consensus disorder prediction 258 327 - -
Cone8ag0357 327 MobiDBLite consensus disorder prediction 271 327 - -
Cone8ag0357 327 FunFam AT-hook motif nuclear-localized protein 1-like 141 272 - -
Cone8ag0357 327 Pfam Plants and Prokaryotes Conserved (PCC) domain 141 254 IPR005175 -
Cone8ag0357 327 Gene3D - 141 271 - -
Cone8ag0357 327 ProSiteProfiles PPC domain profile profile. 136 276 IPR005175 -
Cone8ag0357 327 SUPERFAMILY AF0104/ALDC/Ptd012-like 138 258 - -
Cone8ag0357 327 MobiDBLite consensus disorder prediction 1 89 - -
Cone8ag0357 327 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 19 296 IPR039605 GO:0003680(InterPro)
Cone8ag0357 327 CDD DUF296 140 231 IPR005175 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0349 Cone-Chr12:1934171 Cone8ag0357 Cone-Chr8:2067946 1.11E-200 dispersed
Cone14ag0306 Cone-Chr14:1406920 Cone8ag0357 Cone-Chr8:2067946 1.26E-91 dispersed
Cone15ag0333 Cone-Chr15:1527904 Cone8ag0357 Cone-Chr8:2067946 9.86E-92 dispersed
Cone15ag0865 Cone-Chr15:6575646 Cone8ag0357 Cone-Chr8:2067946 1.33E-89 dispersed
Cone6ag0720 Cone-Chr6:3625087 Cone8ag0357 Cone-Chr8:2067946 1.68E-170 dispersed
Cone6ag0774 Cone-Chr6:3945485 Cone8ag0357 Cone-Chr8:2067946 5.56E-55 dispersed
Cone8ag0311 Cone-Chr8:1798718 Cone8ag0357 Cone-Chr8:2067946 1.07E-57 dispersed
Cone8ag0357 Cone-Chr8:2067946 Cone9ag0724 Cone-Chr9:3455326 8.13E-169 dispersed
Cone8ag0353 Cone-Chr8:2019529 Cone8ag0357 Cone-Chr8:2067946 7.07E-23 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag0357 - - - 0.0