Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag0367 ATGGAGACCAGGAGCTTCCTCTGCTTCTCACTTCTCTGTCTAACCGCAGTTCTGGCTCTATTCTTTACCTGGGCTCCCCTCCCTCCCGCGCCGCCGCTCCCTAACGACCTTCCCGACTGCACCTCCAACAAATTCTGGGGCAACTGCAAAAACCGCCTTCAATCCAAACAACCAACTTCCCTAAAGAACCTGCTCAAATACCCCACGAGCCACAATGACCACTCGTCCGACACCCCCCACCACCCTCTTGACCCGCTCACCATCCAAGAAATAAACAAAGTACATTCAATCCTCTCATCACACGCGCTGTTTATCAACTCACCTTACGCGCTCCACTCTTTAGTCCTGGAAGAACCTGAAAAATCAGCCGTCCTGAGCTGGCAGAAAGGCCACGCGCTACCACCGAGAAAGGCCTCTGTCATCGCACGTGTGAACGGAGAGTCGCTCGTGTTAACTGTGGACTTAGATTCGTCCAAGGTTACCTTACACCAAACAGATTCATCCCCCAGCGGTTACCCCACCATGACGTTCGAGGATATGAGATTGGTCATGTGGGTCCCGTTCACGAACGAGGATTTCAACCGTACGATCATCGACCGTGGGGTTGATCTAAAGGACCTGGCTTGCTTACCGCTTTCCACTGGATGGTATGGTGAAGCAGAGGAGGACAGGAGAGTGATTAAGGTGCAGTGCTTCACCTTGAAGGACACTGCTAATTTTTACATGCGACCAATCGAAGGGTTAACCGTTCTCGTTAACTTAGATTCCAAACGTGTGGTCGAGATTTCAGATAGGGGAAAGCATATTCCAATCCCAAAAGCCGCCAACACTGACTACCGTTTCAAGGCCCAAGGCCCGCCCAATAAGGCAATGAGGCCGTTGAATCCAATATCCCTAGAGCAACCTCTAGGCCCAAGTTTCACTATTGAGGATGAACACCTAGTGAAATGGGCAAATTGGGAATTTCACTTAAAACCTGACCCGAGAGCCGGTGTGATAATCTCTCGGGCCCAATTCCTGGACCCGGATTCAGGTGAGTTGAGGGATGTAATGTATAAAGGTTTTTCATCAGAGCTATTTGTTCCGTACATGGATCCCACTGAGGCGTGGTACTTTAAGACGTATATGGATGCGGGTGAATATGGGTTCGGGTTACAATCCATGCCACTTGACCCACTTAATGATTGTCCGAGAAATGCTCGTTACATGGATGCCATTTTTACAGCGGCTGACGGCACACCGTATGTCCGAGAGAACATGATTTGTGTGTTCGAGAGCTATGCGGGTGATATCGGGTGGCGACATGCGGAGAGTACTCCGATTACAGGTCTTGAGATCACGGAAGTACGACCGAAGGTGACATTAGTGGTTAGAATGGTAGCAACGGTGGCTAATTATGATTATATTGTGGATTGGGAGTTCCAAACAGATGGGCTTATCCGGATTAAGGTAGGTCTTAGCGGGATTTTGATGGTGAAAGGTACTTCTTACGAAAATCTAAACCAAGTAAATGAAGAAGAAAACCTCTACGGCACACTTCTATCGGAAAACACCATCGGTGTAATCCACGATCACTACATCACTTTCTACTTAGACATGGACATAGACGGTTCCGACAATTCTTTCGTTAAGGTAAATATGAGAAAGGAAAACGTCTCCCCAAGAGAGTCCGTACCAAGGAAAACTTACATGAAAGCAGTAAGAAATGTGGCCAAGACCGAAAAAGATGCACAAGTTAAACTGAAACTCTACGAACCGTCCGAGTTTCATGTTATAAACCCTAACATCAAAACCCGGGTTGGTAATCCGGTAGGGTATAAGGTGGTTCCGGCTGGAACCGCCGCTAGCCTGCTTGATGTGGATGACCCACCGCAAAAGAGAGGTGCTTTTACAAATAATCAAATTTGGGTTACACCTTATAATAAAAGCCAAGAGTGGGCTGGTGGTTTATTTGTTACTCAAAGCCGAGGTGATGATACTCTTGCTGTTTGGTCTGACAGGGATCGGCCGATTGAAAATAGAGACATTGTATTGTGGTACACATTGGGGTTTCATCATATACCATGTCAAGAGGATTTCCCAGTAATGCCAACTGTGTCATCAAGTTTTGATCTAAAGCCAGTAAATTTCTTTCAGAGCAACCCCATCCTTCGGAGTCCACCCAATGTTGAGAAGGACCTTCCTGTTTGCAAGCCTGCTTCTTCAGTTTAA 2211 47.35 METRSFLCFSLLCLTAVLALFFTWAPLPPAPPLPNDLPDCTSNKFWGNCKNRLQSKQPTSLKNLLKYPTSHNDHSSDTPHHPLDPLTIQEINKVHSILSSHALFINSPYALHSLVLEEPEKSAVLSWQKGHALPPRKASVIARVNGESLVLTVDLDSSKVTLHQTDSSPSGYPTMTFEDMRLVMWVPFTNEDFNRTIIDRGVDLKDLACLPLSTGWYGEAEEDRRVIKVQCFTLKDTANFYMRPIEGLTVLVNLDSKRVVEISDRGKHIPIPKAANTDYRFKAQGPPNKAMRPLNPISLEQPLGPSFTIEDEHLVKWANWEFHLKPDPRAGVIISRAQFLDPDSGELRDVMYKGFSSELFVPYMDPTEAWYFKTYMDAGEYGFGLQSMPLDPLNDCPRNARYMDAIFTAADGTPYVRENMICVFESYAGDIGWRHAESTPITGLEITEVRPKVTLVVRMVATVANYDYIVDWEFQTDGLIRIKVGLSGILMVKGTSYENLNQVNEEENLYGTLLSENTIGVIHDHYITFYLDMDIDGSDNSFVKVNMRKENVSPRESVPRKTYMKAVRNVAKTEKDAQVKLKLYEPSEFHVINPNIKTRVGNPVGYKVVPAGTAASLLDVDDPPQKRGAFTNNQIWVTPYNKSQEWAGGLFVTQSRGDDTLAVWSDRDRPIENRDIVLWYTLGFHHIPCQEDFPVMPTVSSSFDLKPVNFFQSNPILRSPPNVEKDLPVCKPASSV 736
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 2162391 2166335 + Conep08aG0038300.1 Cone8ag0367 442916

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag0367 736 FunFam Amine oxidase 174 268 - -
Cone8ag0367 736 Gene3D Copper amine oxidase, catalytic domain 289 727 IPR036460 GO:0005507(InterPro)|GO:0008131(InterPro)|GO:0009308(InterPro)|GO:0048038(InterPro)
Cone8ag0367 736 ProSitePatterns Copper amine oxidase copper-binding site signature. 681 694 IPR049947 -
Cone8ag0367 736 PANTHER COPPER AMINE OXIDASE 72 723 IPR000269 GO:0005507(InterPro)|GO:0005507(PANTHER)|GO:0008131(PANTHER)|GO:0008131(InterPro)|GO:0009308(PANTHER)|GO:0009308(InterPro)|GO:0048038(InterPro)
Cone8ag0367 736 FunFam Amine oxidase 307 728 - -
Cone8ag0367 736 SUPERFAMILY Amine oxidase N-terminal region 79 163 IPR016182 GO:0005507(InterPro)|GO:0008131(InterPro)|GO:0009308(InterPro)|GO:0048038(InterPro)
Cone8ag0367 736 Pfam Copper amine oxidase, N3 domain 173 272 IPR015802 GO:0005507(InterPro)|GO:0008131(InterPro)|GO:0009308(InterPro)|GO:0048038(InterPro)
Cone8ag0367 736 Gene3D - 79 173 - -
Cone8ag0367 736 Pfam Copper amine oxidase, enzyme domain 299 716 IPR015798 GO:0005507(InterPro)|GO:0008131(InterPro)|GO:0009308(InterPro)|GO:0048038(InterPro)
Cone8ag0367 736 ProSitePatterns Copper amine oxidase topaquinone signature. 455 468 IPR049948 -
Cone8ag0367 736 Gene3D - 174 268 - -
Cone8ag0367 736 Pfam Copper amine oxidase, N2 domain 81 161 IPR015800 GO:0005507(InterPro)|GO:0008131(InterPro)|GO:0009308(InterPro)|GO:0048038(InterPro)
Cone8ag0367 736 SUPERFAMILY Amine oxidase catalytic domain 291 726 IPR036460 GO:0005507(InterPro)|GO:0008131(InterPro)|GO:0009308(InterPro)|GO:0048038(InterPro)
Cone8ag0367 736 SUPERFAMILY Amine oxidase N-terminal region 171 280 IPR016182 GO:0005507(InterPro)|GO:0008131(InterPro)|GO:0009308(InterPro)|GO:0048038(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag0367 K00276 - - cit:102628236 1117.06
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag0238 Cone-Chr4:1074827 Cone8ag0367 Cone-Chr8:2162391 8.94E-197 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g413 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone8ag0367 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0011676 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30