Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone8ag0418 | ATGTATATAGAGGAAGTGAACGAAGGGGAAGGGGTGGAGAGTAGGGAAGGAGGAAATTCATCTGTTGAAGGTTGTGATTTGAGAAGCCATAGAATCGATGTGTCCAATACCCAAAGGATTTTGGTTGGAGCTGGAGCTAGGGCTCTCTTTTATCCAACTCTACTATACAATGTTGTCAGGAACAAACTTCAGGTTGAGTTCCGATGGTGGGATAGGGTTGATGAGTTTATACTGTTAGGTGCTGTTCCATTCCCTTCTGATGTTCCTCGCTTGAAGGAACTTGGGGTTCGTGGAGTGATTACATTGAATGAACCATATGAGACCTTGGTTCCAACGAATCTCTATCATGCTCTTGACATTGATCATCTTGTTATCCCTACAAGGGACTATTGTTTTGCACCTTCAACGAGTGACATTACCCGTGCGGTAAACTTTATTCACGAAAAATCATTGGGTGGGCAAACTACCTATGTCCACTGCAAAGCTGGCCGAGGACGCAGCACAACTGTTGTAATATGCTACCTGGTGCAGTACAAGCAGATGACACCAGATGTTGCATATGATTACCTGAGGTCAATAAGACGAAGGGTGCTTTTAGCGTCTTCCCAGTGGCAGGCTGTCCAAGAATTCTACCATTGTAAGGTGAAGAAGACACCTATTTTCTACCACCAAATGACTGATCTGATTACGAAACTTCCGAGATGGGAACAAGTCTCTCAAGAAGTCGCGTTTGACGATAGCTCCGTAGTTCTTGTAACCAAATCCGATCTAGAAGGATATGAAAATGATCTCAAGACATGTTCTGTTGGAAATGAAATATGGGCAGATGTAAGTGTCATCTATCGATTTAGGGTAGCCGGTCAGTCTGCTCTGGGTAGGATATCTTGCCTATGGGTCCGTTACCGTGGGGACCACCAGAATATTCCCAGGGAGAAGCTAAGTAGGGAAGGTAGCTGCTCAATCAGGACCACTCATCTGGAAGGTATCAGTGTGGATATTCAAGTGTGCTGA | 1011 | 44.71 | MYIEEVNEGEGVESREGGNSSVEGCDLRSHRIDVSNTQRILVGAGARALFYPTLLYNVVRNKLQVEFRWWDRVDEFILLGAVPFPSDVPRLKELGVRGVITLNEPYETLVPTNLYHALDIDHLVIPTRDYCFAPSTSDITRAVNFIHEKSLGGQTTYVHCKAGRGRSTTVVICYLVQYKQMTPDVAYDYLRSIRRRVLLASSQWQAVQEFYHCKVKKTPIFYHQMTDLITKLPRWEQVSQEVAFDDSSVVLVTKSDLEGYENDLKTCSVGNEIWADVSVIYRFRVAGQSALGRISCLWVRYRGDHQNIPREKLSREGSCSIRTTHLEGISVDIQVC | 336 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 2586147 | 2588288 | + | Conep08aG0043400.1 | Cone8ag0418 | 442967 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone8ag0418 | 336 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 158 | 168 | IPR016130 | GO:0016311(InterPro) | |
Cone8ag0418 | 336 | FunFam | Dual specificity phosphatase domain protein | 69 | 216 | - | - | |
Cone8ag0418 | 336 | Gene3D | Protein tyrosine phosphatase superfamily | 69 | 217 | IPR029021 | - | |
Cone8ag0418 | 336 | CDD | PTPMT1 | 69 | 211 | IPR044596 | GO:0004721(InterPro) | |
Cone8ag0418 | 336 | SMART | dsp_5 | 72 | 213 | IPR020422 | GO:0006470(InterPro) | |
Cone8ag0418 | 336 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Cone8ag0418 | 336 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 69 | 216 | IPR020422 | GO:0006470(InterPro) | |
Cone8ag0418 | 336 | PANTHER | PHOSPHATIDYLINOSITOL PHOSPHATASE | 1 | 290 | - | - | |
Cone8ag0418 | 336 | Pfam | Dual specificity phosphatase, catalytic domain | 91 | 211 | IPR000340 | GO:0016311(InterPro) | |
Cone8ag0418 | 336 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 137 | 205 | IPR000387 | GO:0016311(InterPro) | |
Cone8ag0418 | 336 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 62 | 213 | IPR029021 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone4ag0974 | Cone-Chr4:8426607 | Cone8ag0418 | Cone-Chr8:2586147 | 3.68E-95 | dispersed | |
Cone7ag1160 | Cone-Chr7:8657221 | Cone8ag0418 | Cone-Chr8:2586147 | 9.68E-93 | dispersed | |
Cone12ag0399 | Cone-Chr12:2339405 | Cone8ag0418 | Cone-Chr8:2586147 | 1.04E-223 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone8ag0418 | - | - | - | 0.0 |