Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag0467 ATGGATTCACGAGACGGTCCGCCTCCGCCATTATCAGCGACGAACATGATGGTGGGGCCCAATTCGTACCCTAACAATTCGAGCGCGTCTCAGATGTTTCCGCCTCCGACATCTAGATTTCCGTTCAACTCCTCTGCATCTAAGCCTCTGGATTATGACGGATCGTCGTCTGGTGGGTTTAACGCTGATTCGGGGAAGAGAAGGAGAGGTCGACCGAGAAAGTACTCGCCTGATGGTAACATTGCTTTGGGATTGACGCCTACTCCGCCTCCGCCTATTTCTTCTTCTTCTGGGGTGGTCGGCCATGGGGATTCAGGTGGCACCCCATCATCTGAGCCGACCGTGAAGAAGCACAGGGGAAGACCTCCTGGGTCTGGAAAGAAGCAAATGGACGCTCTAGGGGCTGGTGGAGTTGGGTTTACTCCTCATGTTATTCTGGTGAAACCAGGAGAGTATGCTTATGGGGTTTGCAAGGACATAGCGTCAAAGATTACATCTTTCTCACAGCAAGGGCCTCGTACAGTTTGTATTCTATCTGCAAATGGTGCTGTCTCCAATGTTTCCCTTTGCCAACCAGCAATGTCAGGAGGGACCATTACATATGAGGGACGATACGAGATCATCTCTCTCACAGGCTCCTACTTGCTCTCAGAGAGTAATGGAAATCGAAGCCGAACTGGTGGCTTGAGTGTTTCCCTGGCGGGGTCAGATGGCCGCGTTCTTGGCGGTGGAGTTGCGGGAATGCTCGTTGCATCATCTCTTGTTCAGGTCATTGTGGGTAGCTTCATTGAAGATGAGAGAAAGCCGATTGAACATGTAATTAGATCTGGGACTTCTTCCATGCCATCTCAAACGATTAGCTTTGGGACCCCCCCTGTCACGGCACCTAGCCCTTCCTCTCAAGGGGCATCAAGTGACTCGTCCGATGGAGATGGCAATGATAATCGCTCCCTTAATATGGGCCCCAGCGGACTCTACAGTAATCCCGGTCAAGCACTTCATAATATGAATATGTACCACCATCTATGGGCTGGTCAAACACAATAG 1047 51.0 MDSRDGPPPPLSATNMMVGPNSYPNNSSASQMFPPPTSRFPFNSSASKPLDYDGSSSGGFNADSGKRRRGRPRKYSPDGNIALGLTPTPPPPISSSSGVVGHGDSGGTPSSEPTVKKHRGRPPGSGKKQMDALGAGGVGFTPHVILVKPGEYAYGVCKDIASKITSFSQQGPRTVCILSANGAVSNVSLCQPAMSGGTITYEGRYEIISLTGSYLLSESNGNRSRTGGLSVSLAGSDGRVLGGGVAGMLVASSLVQVIVGSFIEDERKPIEHVIRSGTSSMPSQTISFGTPPVTAPSPSSQGASSDSSDGDGNDNRSLNMGPSGLYSNPGQALHNMNMYHHLWAGQTQ 348
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 3054867 3060969 - Conep08aG0048800.1 Cone8ag0467 443016
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag0467 348 MobiDBLite consensus disorder prediction 15 62 - -
Cone8ag0467 348 Pfam Plants and Prokaryotes Conserved (PCC) domain 158 263 IPR005175 -
Cone8ag0467 348 Gene3D - 143 275 - -
Cone8ag0467 348 ProSiteProfiles PPC domain profile profile. 136 284 IPR005175 -
Cone8ag0467 348 MobiDBLite consensus disorder prediction 276 329 - -
Cone8ag0467 348 MobiDBLite consensus disorder prediction 275 329 - -
Cone8ag0467 348 CDD DUF296 141 262 IPR005175 -
Cone8ag0467 348 MobiDBLite consensus disorder prediction 1 130 - -
Cone8ag0467 348 MobiDBLite consensus disorder prediction 98 112 - -
Cone8ag0467 348 SUPERFAMILY AF0104/ALDC/Ptd012-like 140 264 - -
Cone8ag0467 348 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 15 313 IPR039605 GO:0003680(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0461 Cone-Chr12:2893829 Cone8ag0467 Cone-Chr8:3054867 8.31E-207 dispersed
Cone17ag1478 Cone-Chr17:9974559 Cone8ag0467 Cone-Chr8:3054867 3.29E-69 dispersed
Cone8ag0467 Cone-Chr8:3054867 Cone9ag0724 Cone-Chr9:3455326 9.48E-53 dispersed
Cone8ag0466 Cone-Chr8:3052220 Cone8ag0467 Cone-Chr8:3054867 1.61E-17 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag0467 - - - 0.0