Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag0522 ATGGCCTGTCTCAACTTTCTCAAACTCAAACCGAAACGCAAACCCAATACCAATCGAGTCGTTCTTGATCATCACGATAATTCTAGCAATAAACCCTCACAAAATTCTGATACTTCTACTAATATTCATTCTGTTACAATACAAAAGTTTACTTGGGAGGAAATTAAGAGCTTCACTAAGAACTTCTCGAGAGCAATCGGAACTGGAGGGTTCAGTATCGTCTATTTGGCTCACTTCCCCGGCTCGTTCAGTAGAGCCAAAGCTGCCATCAAAATTTACGGTCAAAGTCCACGTCTAAACCAAGTCTTCAAACAGGAACTAGACATCCTTTTACAGCTTCGCCATGAAAATATAGTCAAGCTCCTCGGCTACTGCCATCAACAAGAAGAAAGTGCCTTAATATTCGAATATGTAACCAACGGAAACTTACAAGAGAAGCTGCATGATCATAAATCAAAGAAAGAATCCGTTCTGTCGTGGAAAACACGCATGGCTATAGCTTTCCAGCTCTCTCAAGCAATCGAGTACTTGCACGAGAAATGCCCGCTACAAATCGTTCACGGCGATATAAAGGCGGCAAACATCTTGTTAGACGAGAATTTCTACGGAAAGCTCTGCGATTTTGGATCGGCGAAAATGGGATTTTCATCAACTGTAATGTCTAGTAATAACAACTGCACTTGTTCTTCAACAAATAGTCCAATGCGAAGGAAGCAGTTGATGATTGGCTCGCCAGGCTACACTGATCCTCACTACCTCAGAACGGGAATAGCTTCGAAGAAAAATGATGTTTACAGTTTCGGAATTGTTCTTCTCGAACTCATTACGGGAAGGGAACCGTTTTGCTCGGAAAGAGGTCAGCCGTTGGCTTCAGTATTTGGTCCAACGCTTAGGGATGGAGATTGTGAAACGCTGGAGTTGTCTGAAATTGTAGACCCACGTTTGGCGGGAGATTTTATAACGGAAGAAGCTAGGGTTGTTCTTTCCCTCTCAGCTAAGTGCCTTCGCCAATCACCTTCATTTAGGCCTTCTGTCAGCCAGATATTGCAGACTTTTAGGGATCAAATATCTTCTATCTGCTTCCTATTCTCTCCTGATAAGGAAAAAGGAAAACAGTACCATGCCTACAAATCAACTAAAAATTAA 1146 42.23 MACLNFLKLKPKRKPNTNRVVLDHHDNSSNKPSQNSDTSTNIHSVTIQKFTWEEIKSFTKNFSRAIGTGGFSIVYLAHFPGSFSRAKAAIKIYGQSPRLNQVFKQELDILLQLRHENIVKLLGYCHQQEESALIFEYVTNGNLQEKLHDHKSKKESVLSWKTRMAIAFQLSQAIEYLHEKCPLQIVHGDIKAANILLDENFYGKLCDFGSAKMGFSSTVMSSNNNCTCSSTNSPMRRKQLMIGSPGYTDPHYLRTGIASKKNDVYSFGIVLLELITGREPFCSERGQPLASVFGPTLRDGDCETLELSEIVDPRLAGDFITEEARVVLSLSAKCLRQSPSFRPSVSQILQTFRDQISSICFLFSPDKEKGKQYHAYKSTKN 381
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 3737160 3738396 - Conep08aG0054300.1 Cone8ag0522 443071
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag0522 381 Gene3D Phosphorylase Kinase; domain 1 23 137 - -
Cone8ag0522 381 MobiDBLite consensus disorder prediction 17 40 - -
Cone8ag0522 381 ProSitePatterns Protein kinases ATP-binding region signature. 66 91 IPR017441 GO:0005524(InterPro)
Cone8ag0522 381 PANTHER OS01G0253100 PROTEIN 28 353 - GO:0005886(PANTHER)|GO:0006468(PANTHER)
Cone8ag0522 381 CDD STKc_IRAK 66 352 - -
Cone8ag0522 381 Gene3D Transferase(Phosphotransferase) domain 1 138 361 - -
Cone8ag0522 381 SUPERFAMILY Protein kinase-like (PK-like) 37 351 IPR011009 -
Cone8ag0522 381 Pfam Protein kinase domain 63 350 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone8ag0522 381 ProSitePatterns Serine/Threonine protein kinases active-site signature. 185 197 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone8ag0522 381 SMART serkin_6 60 357 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone8ag0522 381 ProSiteProfiles Protein kinase domain profile. 60 356 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0577 Cone-Chr12:4303219 Cone8ag0522 Cone-Chr8:3737160 7.62E-218 dispersed
Cone8ag0522 Cone-Chr8:3737160 Cone9ag0289 Cone-Chr9:1245040 7.54E-52 dispersed
Cone8ag0522 Cone-Chr8:3737160 Cone12ag1483 Cone-Chr12:10588937 2.09E-50 transposed
Cone8ag0522 Cone-Chr8:3737160 Cone14ag1225 Cone-Chr14:9937651 9.26E-49 transposed
Cone8ag0522 Cone-Chr8:3737160 Cone17ag0817 Cone-Chr17:6507785 1.56E-48 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83109 PF14547 Hydrophob_seed 2.40E-25 CL0482 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag0522 - - - 0.0