Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone8ag0525 | ATGTTTACATGCATGACAGCATGTACGAAGCAAACACAGGAGGATGGTGGCGGTGGAGACGACGGACATGGAGGAGCGCGTGGCGGTGGTAGCGGCACACCAAGTACGAAAGAAGCTGTCAAAAGCCTGACGGCGCAGATAAAGGACATGGCTTTGAAAGTTTCGGGTACCTATCGACAATGCAAACCTTGTACGGGGTCCACAAGCTACAAGAAAGGACATAGGCCCTACCCCGATTTTGATACAGCTTCTGAGGGGGTCCCATATCCCTTCATAGGAGGTGCAAGCTCAAGTTCTACACCTGCATGGGATTTTCCAAGTGCTAATCATCACCCAAATACAAGGTCGGAATCTAGATTTGCCGGAGACCGCACCCCCGGAGGAGGATTTGAGTCTTTCGATGTAGTGCTTGATGATGAACCTAAAGAATGGATGGCTCAGGTTGAGCCTGGAGTTCATATCACTTTTGTTTCTCTTCCAAATGGTGGAAACGACCTTAAACGAATTCGGTTTAGCCGAGAAATGTTTAATAAATGGCAAGCTCAAAGATGGTGGGGTGAGAACTATGACCGGATTATGGAGCTTTATAATGTTCAGAGATTCAATCGACAAGCCCTTCACACTCCACCAAGGTCCGAAGATGGGAGAGACTCTTCCTACTCGAGGATGGGGTCAGCAAGGGAGAGTCCCATGGGTTCTTCCTTACACAGGGATTGGACTCCAAGGAGCCACTACAAACCATCATTTTCGGGGAATAACAAAGGCTATTTCCCTTCTGACTCTATGGACCAAGGTGGAACACACCATTATAATGCTGCCGGCTCAAGTGCTTATGCTGGTGGGCCCAGGGGGATCGAAACACTGTCTCTCGAGGCTTCCCGGACAACAACCTCATCTCGAGAAGAGGCTTCGGTCTCTGTCAGCAATGCAAGTGATCTTGATTCAGAGTGGGTCGAGGAAGACGAGCCCGGAGTTTATATTACTATTAGACAGCTGTCTGACGGCAGCAGAGAGCTCCGTCGTGTCAGATTTAGCCGTGAAAGATTTGGTGAAGTACATGCAAAGATGTGGTGGGAAGACAACAGAGAGAGAATACAAGCACAATACCTTTAA | 1113 | 48.7 | MFTCMTACTKQTQEDGGGGDDGHGGARGGGSGTPSTKEAVKSLTAQIKDMALKVSGTYRQCKPCTGSTSYKKGHRPYPDFDTASEGVPYPFIGGASSSSTPAWDFPSANHHPNTRSESRFAGDRTPGGGFESFDVVLDDEPKEWMAQVEPGVHITFVSLPNGGNDLKRIRFSREMFNKWQAQRWWGENYDRIMELYNVQRFNRQALHTPPRSEDGRDSSYSRMGSARESPMGSSLHRDWTPRSHYKPSFSGNNKGYFPSDSMDQGGTHHYNAAGSSAYAGGPRGIETLSLEASRTTTSSREEASVSVSNASDLDSEWVEEDEPGVYITIRQLSDGSRELRRVRFSRERFGEVHAKMWWEDNRERIQAQYL | 370 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 3789135 | 3792656 | + | Conep08aG0054600.1 | Cone8ag0525 | 443074 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone8ag0525 | 370 | ProSiteProfiles | BRX domain profile. | 142 | 197 | IPR013591 | - | |
Cone8ag0525 | 370 | ProSiteProfiles | BRX domain profile. | 315 | 370 | IPR013591 | - | |
Cone8ag0525 | 370 | MobiDBLite | consensus disorder prediction | 11 | 41 | - | - | |
Cone8ag0525 | 370 | MobiDBLite | consensus disorder prediction | 100 | 127 | - | - | |
Cone8ag0525 | 370 | MobiDBLite | consensus disorder prediction | 292 | 311 | - | - | |
Cone8ag0525 | 370 | Pfam | Transcription factor regulating root and shoot growth via Pin3 | 142 | 196 | IPR013591 | - | |
Cone8ag0525 | 370 | Pfam | Transcription factor regulating root and shoot growth via Pin3 | 315 | 369 | IPR013591 | - | |
Cone8ag0525 | 370 | Pfam | Transcription factor BRX N-terminal domain | 32 | 64 | IPR027988 | - | |
Cone8ag0525 | 370 | MobiDBLite | consensus disorder prediction | 100 | 115 | - | - | |
Cone8ag0525 | 370 | PANTHER | PROTEIN BREVIS RADIX-LIKE 1 | 1 | 370 | IPR044532 | - | |
Cone8ag0525 | 370 | MobiDBLite | consensus disorder prediction | 207 | 221 | - | - | |
Cone8ag0525 | 370 | MobiDBLite | consensus disorder prediction | 206 | 244 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone4ag0810 | Cone-Chr4:5144668 | Cone8ag0525 | Cone-Chr8:3789135 | 8.55E-92 | dispersed | |
Cone6ag0597 | Cone-Chr6:2921994 | Cone8ag0525 | Cone-Chr8:3789135 | 5.47E-16 | dispersed | |
Cone7ag0762 | Cone-Chr7:4727059 | Cone8ag0525 | Cone-Chr8:3789135 | 2.29E-92 | dispersed | |
Cone7ag1238 | Cone-Chr7:9188765 | Cone8ag0525 | Cone-Chr8:3789135 | 2.51E-87 | dispersed | |
Cone8ag0525 | Cone-Chr8:3789135 | Cone9ag0600 | Cone-Chr9:2830304 | 5.00E-15 | dispersed | |
Cone12ag0525 | Cone-Chr12:3632272 | Cone8ag0525 | Cone-Chr8:3789135 | 1.76E-255 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone8ag0525 | - | - | - | 0.0 |