Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag0537 ATGTCCCTTCTCAGTAGATTTTTTCACAAAAGACCTCCAGATGGGTTGCTTGAATTTGTTGAACGAGTGTATATTTTTGACTCATGTTTCTCCACTGAAGTGTTGCCTGATGGCATGTACCAAATATATCTACATGAAATCATAAACGAGTTACATGAAGATTTCCCAGAATCATCCTTCCTTGCATTTAATTTTCGCGAGGGAGAGAAAAAGAGCCAATTTGCAGAAATTTTGTGTGAATATGATGTTATTGTCCTGGATTATCCACGACAATACGAAGGTTGTCCCCTTCTCCCATTGTCTTTAATACAACATTTCCTCCGTGTCTGTGAGAGTTGGCTTTCACATGGGAATCAGCAGAACGTCATTCTTCTCCATTGTGAAAGGGGGGGTTGGCCCCTCTTGGCTTTCCTGTTAGCTAGCTTTTTGATTTTTAGAAAATTGCAAACCGGTGAGCACAAGACTCTTGAAATTGTTCATCGGGAAGCTCCTAAAGGGTTTTTGCAGCTGTTGTCTCCTCTAAATCCATTGCCTTCTCAGCTTCGATATCTACAGTATGTTTCAAGAAGGAATATAGCTCCAGAGTGGCCCCCTCCAGAGAGAGCTCTTTCTTTAGATTGTGTAATTCTCCGGGCCATTCCGAGCTATGATGGACAAAATGGGTGCAGACCTTATATTCGTATTTTTGGTATGAATCTTCTTAGTAAGGGTGGCCTTTCTACCCAGATGCTTTTTTCAATGCCCAAGAAGAAAAATTCTCTCCGGCACTACCGTCAGGCAGACTGTGATGTGATTAAAATAGATATCCAGTGTATGGTTCAAGGGGATGTTGTGTTGGAGTGTGTGCATTTGGAAATGGAACCAGAAAGGGAAGTCATGATGTTTCGTATAATGTTCAATACTGCATTTATTCGGTCAAACATACTAATGCTCAACTCTGATAACCTGGACATTCTTTGGGATTCAAAGGAGCGGTATCCAAAAAGCTTTAGAGCTGAGATTTTATTTGGGGACGTTGAAAGTGCTTCCCCTCCAAGGGCTCCCACCAGAATTTTAAATGGTGAGGAGAAAGGTGGATTGCCCATTGAAGCTTTTTCAAGAGTTCAAGAACTTTTTAGTGGAGCTGAATGGGTTGAGAATAGTGATGATGCTGCCTTGTGGTTAATAAAAAACCTTTCTATGTTTACTGATGTGAAAGAACTGTCAAGATTCCAAAGTAAAACTAGTTCATATTACTCAACACCTGAATCTGAAGATGAAAACAATACATCTAGTGCTGCTGATAGTTCAGATGAAGCAATAGATATTTTTCCAAAGCCTTTGGTGGAGAAATCGGTGATTTCGAATATAGATGATCCAGTTCCCATATATTCTAGCAATAGTGGTGCACATGAGGTGAATCTTGCGTTAGAGCCACCTGATCAAGCATCTCTTCAATGTGTTCAATCATCTGCTCATCAACAAGCTTTATTTCTGAGCAACGAATCTTTACCTTCAGAACAATCATCACTTCTTCCTCCCTCAGTTACTACCACTGAAAGTTTGACTCCTCCACTGCCGCCACCACTGCCTTTATTTGGTGTTTCCCATGAAGTTTCTTCAAATACTTCATGTCGATCTCCACCTTTGAACCCATCAAATGTTGTCTTGTCATCACAGTCTATTAATACTAAGACTAGACCACCTCCTCCCCCTCCACCTCCACCACCTCCTTTTATTTCTTCTAGAGGCCCTGAAACTTCATCACCCTCGTCTACTTCTGAATCTTGTCAAGAAACTTTGTTGCATGCGCCACCTTCATCCCTTCCGTCTTTCAATTCTACATCTAGCCCTAGTACAGAGTGTGGAGCACCTCCTCCACCTCCACCACCCCCTCCCACTTTCATGCCTTCTATAATTAATAACTCTAATCATGTCTCTACACTGCCTTTGGCTCCATCTCCATTGGGATTCAGGAGCCCAAGTTCTATTCCACCACCTCCACCCCCTCCACCAACACTCAAGCCATCTGCTGCTCCTCCCCCACCTCCACCTCCACCCACATCAAAACCTCCTAGTACTCCTGCTCCACCACCTCCACCTCCTCCACCACCTTCACTTACCTCAAAGCCTCCTGTTGCTCCTCCTCCACCACTACCACCCCCACCTCCCCCCCTTGCTCCAAAACTTCCTAGTTCTGGTCCTGCACCACCTCCACCTCCACCAAAGCCTTCTAGTACTCCTCCACCACCTCCACCTCCAACAAAGCCTCCTGGTCCTCCTCCTCCACCACCTCCCCCTCCCTTTAAACCTCCTGGTGCTCCTCCTCCACCACCTCCACCACCTCCACCTGTACTCAAGCCTTCCAATACTCCACCACCACCTCCCCCACCAACAAGGCCTCCCGGTGCTCCGCCTCCTCCATTGCCAAGTTGTGGTGCCACCCCACCCCCACCACCACCACCAAAGCCTCTTGGTGCTCCTTCACTACCTAATCATGGTGCTACACCAGCTCCACCCCCTACACCTGGAGGAAAGGGTTTGAATGCGCCACCACCACCTCCTCCATCTACCGGAAGAGGGAGGGTTTCTTCAATGTCGACAGGTCAAGCACGGGGCCGAGTTGCTGGTGGAGCTGCAAATGCTCCAAAGAAGAATTCATTAAAGCCGCTGCATTGGGTCAAGGTTACAAGAGCGCTGCAAGGGAGTTTATGGGCTGATACTCAAAAGCAGGAAAATCAATCAAGGGCTCCTGAAATAGACATATCAGAACTAGAAAGTCTCTTCTCAGCAGCTACCGCTTCAGATGCGAGTGGTAATAAAGGTGTTGGTCGACGTGGTTCCAACATTAACAAACCTGAGAAAGTACAACTGATTGACTTGCGGCGAGCATATAATTGTGAAATAATGCTCTCAAAAATAAAAATTCCCTTGCCAGATATGATTAGTGCAGTTCTCGCATTGGACTCTTCTGCCCTTGACATTGACCAGGTTGAGAATCTCATCAAATTTTGTCCCACAAAGGAAGAGATGGAAACATTGAAGAACTATACAGGAGACAAGGGAATGCTTGGAAAATGTGAACAGTTTTTCATGGAGTTGATGAAGGTTCCTCGAGTAGAGTCCAAGTTACGAGTATTTGCTTTTAAACTAACATTTTCCAGTCAGGTGAATGATTTGAGAAACAATTTAAGTACAATTAACAATGCTACTAGAGAGGTGAAGGAATCTGCAAAATTACGTCAGATAATGCAGACAATTCTTACATTGGGAAATGCCTTGAATCAGGGCACTGCACGAGGCTCTGCTATAGGATTCAAATTGGACAGCCTTCTTAAATTATCTGATACTCGTGCAAAAAACAACAAAATGACTTTAATGCATTACTTGGGCAAGCTCCTTGCTGAGAAAATGCCAGAGTTGTTGGATTTTGATAAGGATCTTCTTCATTTGGAAGCTGCCTCTAAGATTCAATTGAAAGCGTTGGCCGAAGAAATGCAGGCTGTGAGTAAAGGTCTTGAAAAGGTTGAGCAGGAACTTGCTGCTTCAATAAATGATGGTGCTATCTCTTTAGGTTTCCAAAAGGTGTTGAAGACTTTTCTTGATACTGCTGAAGCTGAAGTTAGGACACTCATCTCCTTGTATACTGAAGTGGGTAGAAATGCCGACTCATTGTCCCAGTACTTCGGGGAGGACCCTGCACGATGTCCCTTTGAGCAAGTAACTCAAATCTTGATCGTCTTTCTCAAGATGTTCAAGAAATCAAAAGAGGAAAACGAAAGGCTGGCCGATGCCGAAAGGAAAAAGTTGGAAAAGGAATTAGCCATGAAAGAAGGGAGTGCTGCTAGAGCATAG 3834 44.52 MSLLSRFFHKRPPDGLLEFVERVYIFDSCFSTEVLPDGMYQIYLHEIINELHEDFPESSFLAFNFREGEKKSQFAEILCEYDVIVLDYPRQYEGCPLLPLSLIQHFLRVCESWLSHGNQQNVILLHCERGGWPLLAFLLASFLIFRKLQTGEHKTLEIVHREAPKGFLQLLSPLNPLPSQLRYLQYVSRRNIAPEWPPPERALSLDCVILRAIPSYDGQNGCRPYIRIFGMNLLSKGGLSTQMLFSMPKKKNSLRHYRQADCDVIKIDIQCMVQGDVVLECVHLEMEPEREVMMFRIMFNTAFIRSNILMLNSDNLDILWDSKERYPKSFRAEILFGDVESASPPRAPTRILNGEEKGGLPIEAFSRVQELFSGAEWVENSDDAALWLIKNLSMFTDVKELSRFQSKTSSYYSTPESEDENNTSSAADSSDEAIDIFPKPLVEKSVISNIDDPVPIYSSNSGAHEVNLALEPPDQASLQCVQSSAHQQALFLSNESLPSEQSSLLPPSVTTTESLTPPLPPPLPLFGVSHEVSSNTSCRSPPLNPSNVVLSSQSINTKTRPPPPPPPPPPPFISSRGPETSSPSSTSESCQETLLHAPPSSLPSFNSTSSPSTECGAPPPPPPPPPTFMPSIINNSNHVSTLPLAPSPLGFRSPSSIPPPPPPPPTLKPSAAPPPPPPPPTSKPPSTPAPPPPPPPPPSLTSKPPVAPPPPLPPPPPPLAPKLPSSGPAPPPPPPKPSSTPPPPPPPTKPPGPPPPPPPPPFKPPGAPPPPPPPPPPVLKPSNTPPPPPPPTRPPGAPPPPLPSCGATPPPPPPPKPLGAPSLPNHGATPAPPPTPGGKGLNAPPPPPPSTGRGRVSSMSTGQARGRVAGGAANAPKKNSLKPLHWVKVTRALQGSLWADTQKQENQSRAPEIDISELESLFSAATASDASGNKGVGRRGSNINKPEKVQLIDLRRAYNCEIMLSKIKIPLPDMISAVLALDSSALDIDQVENLIKFCPTKEEMETLKNYTGDKGMLGKCEQFFMELMKVPRVESKLRVFAFKLTFSSQVNDLRNNLSTINNATREVKESAKLRQIMQTILTLGNALNQGTARGSAIGFKLDSLLKLSDTRAKNNKMTLMHYLGKLLAEKMPELLDFDKDLLHLEAASKIQLKALAEEMQAVSKGLEKVEQELAASINDGAISLGFQKVLKTFLDTAEAEVRTLISLYTEVGRNADSLSQYFGEDPARCPFEQVTQILIVFLKMFKKSKEENERLADAERKKLEKELAMKEGSAARA 1277
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 3939933 3949895 - Conep08aG0055800.1 Cone8ag0537 443086
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag0537 1277 MobiDBLite consensus disorder prediction 498 512 - -
Cone8ag0537 1277 MobiDBLite consensus disorder prediction 614 630 - -
Cone8ag0537 1277 Coils Coil 1152 1172 - -
Cone8ag0537 1277 MobiDBLite consensus disorder prediction 409 430 - -
Cone8ag0537 1277 PANTHER FORMIN-J 772 1266 IPR051144 -
Cone8ag0537 1277 SMART it6_source 513 1277 IPR015425 -
Cone8ag0537 1277 PRINTS Pistil-specific extensin-like signature 658 681 IPR003882 -
Cone8ag0537 1277 PRINTS Pistil-specific extensin-like signature 692 710 IPR003882 -
Cone8ag0537 1277 PRINTS Pistil-specific extensin-like signature 803 824 IPR003882 -
Cone8ag0537 1277 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Cone8ag0537 1277 MobiDBLite consensus disorder prediction 409 431 - -
Cone8ag0537 1277 SUPERFAMILY Formin homology 2 domain (FH2 domain) 810 1265 - -
Cone8ag0537 1277 FunFam Formin-like protein 871 1257 - -
Cone8ag0537 1277 SMART PTEN_C2_2 198 338 IPR014020 -
Cone8ag0537 1277 Gene3D - 197 342 - -
Cone8ag0537 1277 ProSiteProfiles Formin homology-2 (FH2) domain profile. 871 1271 IPR015425 -
Cone8ag0537 1277 Pfam Formin Homology 2 Domain 875 1246 IPR015425 -
Cone8ag0537 1277 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 338 IPR035892 -
Cone8ag0537 1277 MobiDBLite consensus disorder prediction 577 613 - -
Cone8ag0537 1277 MobiDBLite consensus disorder prediction 529 557 - -
Cone8ag0537 1277 Gene3D Protein tyrosine phosphatase superfamily 16 191 IPR029021 -
Cone8ag0537 1277 MobiDBLite consensus disorder prediction 558 576 - -
Cone8ag0537 1277 MobiDBLite consensus disorder prediction 498 880 - -
Cone8ag0537 1277 Pfam C2 domain of PTEN tumour-suppressor protein 198 337 IPR014020 -
Cone8ag0537 1277 Coils Coil 1246 1268 - -
Cone8ag0537 1277 MobiDBLite consensus disorder prediction 652 852 - -
Cone8ag0537 1277 Gene3D Formin, FH2 domain 872 1256 IPR042201 -
Cone8ag0537 1277 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 21 188 IPR029021 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0537 Cone-Chr12:3764208 Cone8ag0537 Cone-Chr8:3939933 0 dispersed
Cone2ag0575 Cone-Chr2:3333078 Cone8ag0537 Cone-Chr8:3939933 8.89E-266 dispersed
Cone2ag0827 Cone-Chr2:34275656 Cone8ag0537 Cone-Chr8:3939933 1.69E-233 dispersed
Cone8ag0537 Cone-Chr8:3939933 Cone17ag0984 Cone-Chr17:7577492 9.91E-289 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag0537 K28090 - cit:102607623 776.933