Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag0549 ATGGGCAGGATGGGAGGCATTCAGAGAACTTACTCCGCTAATCCCGATGACTACAAGCTTCTCGAAGAGGTCGGTCATGGAGCCAGTGCGACGGTTTTCAGAGCGATCTATCTTCCATTCAATGAAGTTGTTGCTATCAAGTGCTTGGATCTCGATCGATGCAATAGCAATCTGGATGACGTACGAAGGGAGGCTCAAACAATGAGTTTGATAGATCATCCAAATGTTGTAAGGTCATACTGTTCCTTTGTTGTTGAACGAAACCTTTGGGTGGTCATGCCATTCATGGCAGAAGGTTCTTGTTTGCACCTAATGAAGATAGCGTATCCAGATGGCTTTGAAGAGGCTGCTATTGGTTCTATACTAAAGGAAACACTTAAAGCTTTGGAGTACCTTCATCGCCAAGGACATATTCACCGGGACGTTAAGGCTGGAAATATACTACTTGATACTAATGGGTCAGTGAAGCTTGCAGATTTCGGTGTTTCAGCTGGCATGTTTGATGCAGGTGATAGACAACGCTCTAGAAATACCTTTGTAGGGACCCCTTGCTGGATGGCACCAGAGGTACTACAACCGGGAAGTGGATACAATTCAAAGGCTGACATTTGGTCCTTTGGTATAACTGCATTAGAGTTGGCCCACGGTCATGCACCATTCTCAAAATACCCTCCCATGAAGGTACTCCTGATGACTATACAAAATGCTCCTCCTGGACTGGATTATGATCGTGATAAAATATTTTCAAAGTCTTTTAAAGAAATGGTTGCAATGTGCCTGGTCAAAGATCAAACCAAGAGGCCGACGGCTGAGAAGCTATTGAAACACTCAATATTCAAGAATGCAAAGCCTCCAGAGCTTTCTGTGAAGAAACTATTTACTGACTTGCCTCCTCTTTGGAACCGTGTAAAGGCCCTCCAGCTTAAAGATGCAGCACAATTGGCTTTAAGGAAAATGCCATCAGCAGAACAAGAAGCACTATCACAGAGCGAGTACCAGCGAGGAGTTAGTGCATGGAATTTTGATGTTGAGGATTTGAAAGCCCAGGCCTCACTGGTGCATGATGATGATGATGATATGGCAGAGATGAAGGAAGAGGAAGAAAGTGTGAAATCATCTATTAGTGATAAGTATGAAAATGACACCCTATCTGGTTTGAGGAAATGGACCTCGAGTAATGGATTACCTCAGGCTGAGCGACGAGTGCCAGTAAGTGGTAAGGACTTGCCACCTTATGAATGCTTGACCAAAAAGGGCAAGATTCTAGAAAATGATTTGTTGGAATCCATTTCCCAAGAGAAACCTGGTGCAATGAAAATTGGAAATAATTCCGAGGCGACAACATCAACTTCAGGACAAGATATTTTACACTCCACGACTGAAACTCAGTCAGTGAAAAGTCGCCAAACTCAGAGTGGGCCCCTCATTCCTGGTATTGTCCTTGGTCATTCAATAACAGAAAGAGGGCATAACTCTGAGAGGTCTGAGAATGAAACTCGACCAACTGCTGATAAATCTTATCGTGAAGTACAGAGAGCGCCAAGCTTGAGTGGTCCATTGATGCTGCCTAACCGAGCTTCAGCAAACAGCTTATCAGCTCCCATAAAATCGTCTGGAGGGTACAGAGATTCGTTGGATGAGAAATCAAAGGCTAATCTTGTGCAAATTAAAGGAAGATTTTCGGTTACATCAGAAAACTTGGATCTTGTAAAGGATATTCCCTTGAGTACAGTTCCACGTCGGTCACAGGGATCACCACTGAGGAAGTCGGCTAGTGTTGGTGATTGGATATTTGATTCCAAGAAAATGCCTGTTGGTCAGCCAGCAAAGGAAGTTTACAACAATAATATACCTGCATCAGTTATCATGCCTCATGTTCAGAATATTTTTCAGCAAACATCTATTCAACAGGATCTTATTATGAATTTATTGAATGGCTTGCAATCAGCCGAGGTAGTAGAAGCGACACTAGATGCAAAGTTGCCACCGCTGCCTCAAAGCTCAGAGAACAATGGAACTGTTGACATGACAGCTTCCGAAAGAGAGCGTTTGCTAGTTCTCAAGATCTCCGAACTTCAAATCAGGATGATGCACTTGACTAGTGAACTAACTTCTGAAAAATTGAAGCACATAAAACTACAAGTGCAGCTAAACACAGTTTGTGGTCAAGAAGAAGATAGGAGGCAGAAAGGAAACGCCTAA 2202 43.23 MGRMGGIQRTYSANPDDYKLLEEVGHGASATVFRAIYLPFNEVVAIKCLDLDRCNSNLDDVRREAQTMSLIDHPNVVRSYCSFVVERNLWVVMPFMAEGSCLHLMKIAYPDGFEEAAIGSILKETLKALEYLHRQGHIHRDVKAGNILLDTNGSVKLADFGVSAGMFDAGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKIFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSIFKNAKPPELSVKKLFTDLPPLWNRVKALQLKDAAQLALRKMPSAEQEALSQSEYQRGVSAWNFDVEDLKAQASLVHDDDDDMAEMKEEEESVKSSISDKYENDTLSGLRKWTSSNGLPQAERRVPVSGKDLPPYECLTKKGKILENDLLESISQEKPGAMKIGNNSEATTSTSGQDILHSTTETQSVKSRQTQSGPLIPGIVLGHSITERGHNSERSENETRPTADKSYREVQRAPSLSGPLMLPNRASANSLSAPIKSSGGYRDSLDEKSKANLVQIKGRFSVTSENLDLVKDIPLSTVPRRSQGSPLRKSASVGDWIFDSKKMPVGQPAKEVYNNNIPASVIMPHVQNIFQQTSIQQDLIMNLLNGLQSAEVVEATLDAKLPPLPQSSENNGTVDMTASERERLLVLKISELQIRMMHLTSELTSEKLKHIKLQVQLNTVCGQEEDRRQKGNA 733
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 4082559 4096984 + Conep08aG0057000.1 Cone8ag0549 443098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag0549 733 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524(InterPro)
Cone8ag0549 733 Gene3D Phosphorylase Kinase; domain 1 7 95 - -
Cone8ag0549 733 FunFam Serine/threonine-protein kinase BLUS1 7 95 - -
Cone8ag0549 733 MobiDBLite consensus disorder prediction 432 454 - -
Cone8ag0549 733 SUPERFAMILY Protein kinase-like (PK-like) 15 334 IPR011009 -
Cone8ag0549 733 FunFam serine/threonine-protein kinase BLUS1-like isoform X2 99 329 - -
Cone8ag0549 733 Gene3D Transferase(Phosphotransferase) domain 1 99 327 - -
Cone8ag0549 733 Pfam Protein kinase domain 18 279 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone8ag0549 733 MobiDBLite consensus disorder prediction 459 478 - -
Cone8ag0549 733 ProSiteProfiles Protein kinase domain profile. 18 279 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone8ag0549 733 MobiDBLite consensus disorder prediction 487 507 - -
Cone8ag0549 733 MobiDBLite consensus disorder prediction 436 454 - -
Cone8ag0549 733 MobiDBLite consensus disorder prediction 459 474 - -
Cone8ag0549 733 CDD STKc_OSR1_SPAK 16 279 - -
Cone8ag0549 733 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 9 713 IPR047173 GO:0043539(InterPro)
Cone8ag0549 733 SMART serkin_6 18 279 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone8ag0549 733 MobiDBLite consensus disorder prediction 487 525 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone20ag1129 Cone-Chr20:7711788 Cone8ag0549 Cone-Chr8:4082559 1.58E-154 dispersed
Cone4ag0304 Cone-Chr4:1392541 Cone8ag0549 Cone-Chr8:4082559 1.03E-97 dispersed
Cone6ag0161 Cone-Chr6:791788 Cone8ag0549 Cone-Chr8:4082559 2.72E-58 dispersed
Cone8ag0549 Cone-Chr8:4082559 Cone9ag0187 Cone-Chr9:814399 5.29E-61 dispersed
Cone12ag0550 Cone-Chr12:3937856 Cone8ag0549 Cone-Chr8:4082559 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83112 PF12931 Sec16_C 2.90E-53 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag0549 - - - 0.0