Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag0578 ATGGCTGCATCATCATCTTCTTCTTCTATGGCCTCGATAAGGTCATGGAGAACGACGTTTCTGACGCTCAGAGACGAATCTCTCACATCTTCATCGTCGATTCCGCAACTCCTCGACCATCTCATCTTCTCCCACTCTCACTCATTGATTTCTGCCGCCCCTGACCTTCCTCCTCTCGAGGTTTCCTCCGATCTGTTGTTCATCTTGGAACTGGTAACGTCTGCTTCTGAAGCCGCTGAAGATATTTCCAACGCATTCGCAGATGTCTTCCACTTGATCCATGATGTTTCCCATCGTGTTTCTTTGGAGTTCAAATCTTCGTCTTGGACCTTCCTTCTTGACTCTTTTGGTAATATGATTCAGTACCTTCTTAACAAAGTTGATATTAGGGGAAATATTTTGCTACTTGATCCAGTTTTGGAGACTTTGGAGACTATAAGGCATATTAATACTATACATCACCAGAAGTATTCTGTACTAGAGGACATTCAGCTGGTGAAGTTCTTACTTCGTGTAATTATCAACTCCCATTCTGCATTGTTTTCTACACTGGTAACAATCAATAACAGTAGGCTCCCGGTTGAAATTAGCAATAGAACGCCCAAACAAAACTTTTTATCGGTAGTTCAGACTACTGCCTTTTCTATGCTTAGTCAAGCAATCTCAAGAGTTGGGTCATCTATGCCAGTTGATGTTTGGAAATCAATTATTGAGGCTTATCGGAAAGTGATGGATGTCTTCACATCTAAGAATTTTCTGGTGGAAGACAAGGCTATGTTGAGGTATTATCTGTCTCTTCTTCATTGTCTCCATTTGGTTCTAGCAGATCCCAAGTGTTCCCTTTCTGACCATGGGTCAGTTTTTGTCGCAGCTCTGCGAATGTTCTTTACCTATGGGCTTACTAGTAGACCCCAACAAACATTAACAGTTGATCAGCGGGCAAAGGAACTTAGTTTGTCAAATTTGGAAGAACCTCAAAAGAAAAATGATACACCATATAGGCCTCCACACCTACGTAAAAGGAACAGCTCCAGCTTGAAGGCCAATAATGCTTTAAATTCTCAGACATCTTCTGATCAAGAATCTCAGGCGATTGATTTTACATCCTCTGATTCAGATTATAGTGACACTGATGGACAAGTTAAAGATGGTTATAGCATGCAGACTGCCAAAGTGCGAGTGGCTGCTATTATTTGCATACAGGATCTATGTCAAGCTGATCCCAAAGCATTTACCACCCACTGGACACAACTTCTACCAATGGGGGATGTCCTTTTGCCGAGGAAGTTTGAAGCGACCTTAATGACATGTTTGCTATTTGATTCTTCTTTGAAGGCACAAATTGCATCTGCTTCAACCCTCACAGTAATGTTGGATGGGACAAATTTTGCCTTCATGCAAATAGCAGAGTACAAGGAACCCAACAGATGTGGATCATTTACAGCACTTTCAAGTTCCCTTGGACAAATACTAATGCAACTTCATACAGGCATTCTACACTTGATCCAGTGTGGAACTCATGAAAGATTACTGACATCGTTATTCAAGATTCTTATTCTTTTGATTTCGTCAACTCCATATTCAAGGATGCCTGGAGAGTTGCTGTTGAAAGTGATGAAAACTCTACAAGCAAGACTGGATGGAGGTTTTCCATTCAAAAGTGATCATACTAGCCTGTCGGCTGCGGCTGTTAGTTGCTTGGCTGCAACCTTGTCTACATCACCATCATCACCTCAAGTAAGGGAAATGCTCTTCAGAGAAATGTCCGAAGGTCTTGCTAAGGCTGAAAAGAAATCAGGTCTTCTTCTTACATTACTCAAATACTCAGAACAACGAAGCAACCCAACAATATGCTTTGAGGCTCTACAGGCCCTTAGAGCTGTCTCGCACAATTATCCTCATATCATGTCTGCTTATTGGGAACAAGTTTCCTCCATTGTTTGTGGCTTTCTAAGAGGACCTGCTTCTGAAGTATTCCCAATGCAGTGGAAGGTTGGAGAAAGTGTTGGGGGGGTTGGAGAAAAAGTGATCACTGCAGCAGTCAAGGTTTTGGATGAATGTCTTCGGGCAATGTCTGGGTTCAAAGGTACGGGGGACCTTTCAGATGATAAACTATTGGCTACCCCATTCACTTCTGACATCAAAAGAATGAAGAAGGTTTCATCAGCACCAACATATGATCCAGAGAGATCAGAGGAGGCCAAGAGCGAACCTGAAGCAAGTCATTCTGGATGCTTGCAATGGTGTGAGGCAATTGAGAAGCATCTATCTCAGGGCCTGTTTCAAAGTTCTGCAATGGTAAGAGCTGCTTCTGTTACATGTTTTGCGGGTCTTACTACTTCAGTATTCTCTTATCTTGTAAAGGAAAAGCAGGACTATATCATCTCTTCTTTAGTGAATGCTGCAGTAAATGACGAGGTGGCTTTGGTTAGATCAGCTGCTTGTCGAGCTATTGGTGTCATTTCATGCTTCCCTGAAGTTTCTCATAGTGTAGCAAATGTTGAAAAGTTAATCCATGCTGTTGAGATCAACACACATGATTCTATGGTTTCAGTGCGAATAACAGCCTCCTGGGCCCTGGCAAATATATGTGATTCTATCCATCATTGCATTGATAATTTTCCCTCTGAACAGTGTACAGATTCCAATGGGAATTGCCATTTACTCATATTTTTGATTGAGTGTACATTACGCCTGGCGATGGATGGAGACAAGATAAGATCAAATGCTGTAAGAGCTCTTGGAAATCTTTCAAGGTATGTCAAATATTCGAATATACCTTGTCAGAATGGGAAACCAGCAGGAAAAAGTGGCTTATCTTCAGTGAGAAACAGAACTGAGGATCTTCCATCAACAAGTGGCTCAAAATCTACGGATAGATACACATTAGAATTGTATAATCCAGTTTCCCTGGAAGACTCAAGCTGGCTAGAGAGAATGGTGCAGGCATTTATTTCTAGTATCACAACTGGGAATGTAAAGGTGCAATGGAATGTATGCCATGCTTTGAGCAACCTATTTCTGAATGAGACATTGAGACTGCAGGACATGGATTGGGCACCATCTGTTTTCAGTATCCTCCTCCTTCTACTACGTGATTCCTCTAACTTTAAGATCAGGATACAAGCTGCTGCTGCTTTGTCTGTGCCAGCATCAGCTCATGATTATGGGAAATCTTTCTCAGATGTAGTCCAAGGTCTGGAGCATACAGTAGAGAACCTTGGTTCAGAACAAATTACTGCACCATCAAGTTTCAAATATAAGGTTGCACTTGAGAAGCAGTTAACCTCAACCTTGTTACACGTTCTTGCCCTTGCTTCAAACACTGATCATCAATCTTTAAAAGATTTTCTTGTCAAAAAAGCTTTCTTTCTTGAAGAGTGGTTTAAGGTGCTCTGCTCATCCATAGGAGAAACGAGTACACAGCCTGATTGTGACAACAAGTCCACTGAAAATCAGAAGAGAGAGATGATATCCAAAGCATTACACTCACTGATTGAAGTATACACAAGCAGAAAACGCGCAGCAATTGCTCAGAAATTTGAGAATTTGAACACCACCATTCGGTAG 3570 41.65 MAASSSSSSMASIRSWRTTFLTLRDESLTSSSSIPQLLDHLIFSHSHSLISAAPDLPPLEVSSDLLFILELVTSASEAAEDISNAFADVFHLIHDVSHRVSLEFKSSSWTFLLDSFGNMIQYLLNKVDIRGNILLLDPVLETLETIRHINTIHHQKYSVLEDIQLVKFLLRVIINSHSALFSTLVTINNSRLPVEISNRTPKQNFLSVVQTTAFSMLSQAISRVGSSMPVDVWKSIIEAYRKVMDVFTSKNFLVEDKAMLRYYLSLLHCLHLVLADPKCSLSDHGSVFVAALRMFFTYGLTSRPQQTLTVDQRAKELSLSNLEEPQKKNDTPYRPPHLRKRNSSSLKANNALNSQTSSDQESQAIDFTSSDSDYSDTDGQVKDGYSMQTAKVRVAAIICIQDLCQADPKAFTTHWTQLLPMGDVLLPRKFEATLMTCLLFDSSLKAQIASASTLTVMLDGTNFAFMQIAEYKEPNRCGSFTALSSSLGQILMQLHTGILHLIQCGTHERLLTSLFKILILLISSTPYSRMPGELLLKVMKTLQARLDGGFPFKSDHTSLSAAAVSCLAATLSTSPSSPQVREMLFREMSEGLAKAEKKSGLLLTLLKYSEQRSNPTICFEALQALRAVSHNYPHIMSAYWEQVSSIVCGFLRGPASEVFPMQWKVGESVGGVGEKVITAAVKVLDECLRAMSGFKGTGDLSDDKLLATPFTSDIKRMKKVSSAPTYDPERSEEAKSEPEASHSGCLQWCEAIEKHLSQGLFQSSAMVRAASVTCFAGLTTSVFSYLVKEKQDYIISSLVNAAVNDEVALVRSAACRAIGVISCFPEVSHSVANVEKLIHAVEINTHDSMVSVRITASWALANICDSIHHCIDNFPSEQCTDSNGNCHLLIFLIECTLRLAMDGDKIRSNAVRALGNLSRYVKYSNIPCQNGKPAGKSGLSSVRNRTEDLPSTSGSKSTDRYTLELYNPVSLEDSSWLERMVQAFISSITTGNVKVQWNVCHALSNLFLNETLRLQDMDWAPSVFSILLLLLRDSSNFKIRIQAAAALSVPASAHDYGKSFSDVVQGLEHTVENLGSEQITAPSSFKYKVALEKQLTSTLLHVLALASNTDHQSLKDFLVKKAFFLEEWFKVLCSSIGETSTQPDCDNKSTENQKREMISKALHSLIEVYTSRKRAAIAQKFENLNTTIR 1189
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 4650238 4679398 - Conep08aG0059900.1 Cone8ag0578 443127

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag0578 1189 Gene3D - 972 1081 IPR011989 -
Cone8ag0578 1189 MobiDBLite consensus disorder prediction 342 380 - -
Cone8ag0578 1189 Pfam Domain of unknown function (DUF4042) 391 575 IPR025283 -
Cone8ag0578 1189 SMART arm_5 824 865 IPR000225 GO:0005515(InterPro)
Cone8ag0578 1189 SMART arm_5 589 630 IPR000225 GO:0005515(InterPro)
Cone8ag0578 1189 SMART arm_5 882 919 IPR000225 GO:0005515(InterPro)
Cone8ag0578 1189 SMART arm_5 964 1008 IPR000225 GO:0005515(InterPro)
Cone8ag0578 1189 SUPERFAMILY ARM repeat 389 1136 IPR016024 -
Cone8ag0578 1189 MobiDBLite consensus disorder prediction 932 957 - -
Cone8ag0578 1189 MobiDBLite consensus disorder prediction 318 380 - -
Cone8ag0578 1189 PANTHER MALARIA ANTIGEN-RELATED 9 1185 IPR052107 -
Cone8ag0578 1189 MobiDBLite consensus disorder prediction 318 337 - -
Cone8ag0578 1189 Gene3D - 381 708 IPR011989 -
Cone8ag0578 1189 Gene3D - 717 943 IPR011989 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag0578 K24815 - - csv:101212003 1346.26
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g283 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone8ag0578 . . . . Csa05g00135 . . . . . . . . . . . . . . . . . . . . . . . . . . Cla01g00119 Cam01g0122 Cec01g0122 Cco01g0123 Clacu01g0118 Cmu01g0120 Cre09g2386 Lsi09g00107 . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007418 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 3 1 1 2 1 1 35