Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag0583 ATGGACGTGCAACATGCTGAACATGGGAATGTAATTGAGGTAAGTGGGGATGTGCCATCCATAGCAGTGGGCATAAGTGGAAGCAAGGTCTGTGGCGAAGCACCATGTAATTTTTCCGATTCTAAAAACAGTAATAAAGACGCAGGGGAAAGATCCTCCTCAATGCGAAAGCTCTGGATAGCAGTTGTGCTTTGTGTTATTTTCATGGCAGTAGAAGTGGTTGGAGGTATCAAAGCAAACAGTCTTGCAATTTTAACAGATGCAGCTCATTTATTGTCAGATGTTGCTGCCTTTGCCATCTCTTTATTCTCAATCTGGGCTTCTGGGTGGGAAGCTACTCCTCGTCAATCTTATGGTTTTTTCCGGATTGAAATATTGGGTGCTCTTGTTTCTATCCAGATGATATGGCTTCTAGCCGGAATCCTCGTTTATGAAGCAATAAGTAGACTCATTAATGATACCGGTGAAGTTAAGGGCTTTCTTATGTTTGCTGTTTCTGCCTTTGGGCTAGTGGTGAACATTGCAATGGCAGTATTGCTTGGTCATGATTATGGTCATGGTCACTCCCATTCACATGGACATGGTCATGATGATCATAATCATGACGAACATGGTCATCATCACCATCATGGGTTAAGTGTTACAAAGCATCATCGTGATCATCATCATCATCGTGGTCACCGTGAAGATCAGGCGGAGTCGCTTCTTGAGAAAGAAAGCCAAGCTGTTAAACAGGAGAGGAATGTGAATTTGCAAGGGGCCTACCTTCACGTATTGGGCGATTCTATTCAGAGTATTGGAGTAATGATAGGTGGGGCTGTCATATGGTATAAACCGGAGTGGAAGGTGATTGATCTTATATGCACTCTGATTTTTTCGGTAATTGTGCTGGGAACTACGTTTAGGATGCTACGGAACATTCTGGAAGTGCTGATGGAGAGTACACCTAGAGAGATTGATGCTACGAAGCTGGAGAATGGGCTTTGTGAGATGGATGAGGTGGTTGCTATACATGAATTACATATTTGGGCGATTACTGTTGGTAAGGTGCTTCTGGCTTGTCATGTTATAATTAGACCAGAAGCTGACGCTGATATGGTGCTTGACAAGGTTATAGACTACATAAGGAGAGAATATAATATCAGTCATGTCACTATCCAGATAGAGCGTCAGTAG 1176 42.94 MDVQHAEHGNVIEVSGDVPSIAVGISGSKVCGEAPCNFSDSKNSNKDAGERSSSMRKLWIAVVLCVIFMAVEVVGGIKANSLAILTDAAHLLSDVAAFAISLFSIWASGWEATPRQSYGFFRIEILGALVSIQMIWLLAGILVYEAISRLINDTGEVKGFLMFAVSAFGLVVNIAMAVLLGHDYGHGHSHSHGHGHDDHNHDEHGHHHHHGLSVTKHHRDHHHHRGHREDQAESLLEKESQAVKQERNVNLQGAYLHVLGDSIQSIGVMIGGAVIWYKPEWKVIDLICTLIFSVIVLGTTFRMLRNILEVLMESTPREIDATKLENGLCEMDEVVAIHELHIWAITVGKVLLACHVIIRPEADADMVLDKVIDYIRREYNISHVTIQIERQ 391
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 4840321 4844569 - Conep08aG0060400.1 Cone8ag0583 443132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag0583 391 MobiDBLite consensus disorder prediction 210 225 - -
Cone8ag0583 391 Pfam Cation efflux family 58 312 IPR002524 GO:0006812(InterPro)|GO:0008324(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone8ag0583 391 SUPERFAMILY Cation efflux protein transmembrane domain-like 52 313 IPR027469 -
Cone8ag0583 391 MobiDBLite consensus disorder prediction 189 239 - -
Cone8ag0583 391 Gene3D Cation efflux protein transmembrane domain 54 311 IPR027469 -
Cone8ag0583 391 MobiDBLite consensus disorder prediction 189 209 - -
Cone8ag0583 391 NCBIfam cation diffusion facilitator family transporter 55 391 IPR002524 GO:0006812(InterPro)|GO:0008324(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone8ag0583 391 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 26 390 IPR050681 GO:0005385(PANTHER)|GO:0005773(PANTHER)|GO:0005886(PANTHER)|GO:0071577(PANTHER)
Cone8ag0583 391 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 318 389 IPR036837 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0570 Cone-Chr12:4186403 Cone8ag0583 Cone-Chr8:4840321 1.07E-188 dispersed
Cone14ag0467 Cone-Chr14:2241184 Cone8ag0583 Cone-Chr8:4840321 8.34E-177 dispersed
Cone2ag0161 Cone-Chr2:838522 Cone8ag0583 Cone-Chr8:4840321 2.76E-10 dispersed
Cone7ag1091 Cone-Chr7:8274402 Cone8ag0583 Cone-Chr8:4840321 1.86E-99 dispersed
Cone8ag0583 Cone-Chr8:4840321 Cone15ag0501 Cone-Chr15:2403507 1.15E-181 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag0583 K14689 - csv:101213602 549.28