Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag0594 ATGGGTTCGAGGTCTTATTCCAACTTACTAGAGCTTGCCTCTGGTGGTTCTCCAACCTTTGGCCGAGAAAAAAAGAGACTTCCGCGAGTTGCCACTTTTGCCGGAGTATTATCCGAGCTAGATGATGAAGACAACAACAGTACTGGCTCTAATGCTCCTTCTCTCTCCCAAGAACGGGTCATCATAGTGGGAAACCAACTTCCACTTCGCCTCCATAAAGAAAACAATGGAGCTTGGAACATTAGCTGGGATGAGGACTCACTTCTTCTGCAACTCAAGGATGGCCTTGGAGAAGACGTAGAAGTGATTTATGTTGGCTGTCTCAAAGAGGAAATTAACCCGAGCGAGCAAGATAATATGGCCCAAAACTTGCTCAATACATTCAAGTGTGTCCCTACATTCCTCCCTCGAGATCTCTTTACTAAGTTTTATCATGGATTCTGCAAACAATATTTATGGCCCTTATTTCATTACATGCTTCCTCTATCACCCGATCTTGGTGGCCGGTTTGATAGGTCTCTTTGGCAAGCTTATGTATCAGTGAACAAGATATTTGCAGATACAATAATGGAAGTGATTAGTCCTGACGATGATTTCGTTTGGGTCCATGACTATCACTTAATGGTTTTACCAACTTTTCTGAGGAAAAGATTCAACATGGTGAAGCTCGGATTCTTCTTACACAGTCCATTCCCTTCTTCTGAAATCTATAGGACCCTTCCAGTGAGAGATGAGCTTTTACGGGCATTGCTTAACTCAGACCTGATCGGATTCCATACTTTTGATTATGCCAGGCACTTCCTATCTTGCTGTAGTAGAATGCTCGGTTTGTCTTATCAATCCAAGCGAGGTTACATAGGGCTTGAATATTATGGTCGTAATGTAAGCATTAAAATTCTCCCTGTGGGTATTCATATAGGGCAGCTTCAAAGTGCCTTAGATCTTCCAGAAACAGAGTCTAAAGTGGCCGAGCTTAGAGATCGATTTAGGGGTCGGACTGTTTTGCTTGGTGTTGATGACATGGACATCTTTAAAGGAATAAGCTTGAAGCTTTTAGCAATGGAACAATTACTAATACAACATCCTGATAAGAGGGGTATGGTTGTTTTGGTACAGATTGCAAACCCAGCAAGAGGCAGAGGGAAGGATGTACAAGAGATTGTGACTGAAACTAATGCGACTGTGAATAGAATCAATGAAACATTTAAAAGGCCTGGATATGAACCCGTTGTTTTGATCAATACCCCATTACAGTTTTATGAGAGAATTGCTTATTATGTAATTGCGGAGTGTTGTCTTGTTACAGCAGTGAGAGATGGTATGAATCTAATCCCTTATGAGTATGTCATATGCCGACAAGGAAATGTGAAACTAGATGAGACTATTGGGCTTAATCCTTCTGCCGCTAAGAAGAGCATGTTAGTTGTATCCGAGTTTATTGGTTGTTCCCCATCACTAAGTGGGGCCATTCGGGTTAACCCATGGAACATTGATGCTGTTGCTGAGGCTATGGATTCTGCCCTCGTTCTATCTGACGGAGAAAAGCAGTTAAGACATGAGAAGCACTATAGGTATGTTAGTACCCATGATGTTTCTTACTGGGCACGGAGTTTTTTGCAGGATCTTGGCCGAGCTTGTGGGGATCATGTGATGAGGAGGTGTTGGGGGATTGGGTTTGGTTTAGGGTTTAGAGTGGTAGCTTTGGATCCGAATTTTAGGAAGCTTTCGGTTGAGCATATTGTCTCGGTTTATAAAAGGACTAAGAAACGGGCTATTTTGGTAGATTATGATGGGACTATGATGCTCCGGTGTTCGATTAGCAAAAGCCCTAGCATGGAGGCTGTTGAAATCTTGAACATCTTGTGTAAAGATCCTAACAATGTTGTCTTCCTTGTTAGTGGGAGGGACAGAAAGACTTTGTCTGAATGGTTTTCGTCTTGTGAACAGCTGGGACTTGCAGCGGAGCATGGTTATTATTTCAGGCCAAATCATAGTGCAGACTGGGAAACTTGCGTGGCAGTGCCAGATTTTGATTGGAAACAGATAGCGGAGCCAGTTATGCATCTGTATACTGAAACAACTGATGGTTCTACAATAGAAACCAAAGAAAGTGCTCTTGTTTGGAACTATATGTATGCAGATCCCGATTTTGCCTCATGCCAAGCTAAGGAGCTTTTAGAACACCTTGAAAGTGTTCTTGCCAACGAGCCAGTTTCTGTCAAGAGTGGCCAATACATAGTAGAAGTTAAACCTCAGGGTGTCAATAAGGGCATTGTAGCGGAGCGGCTCCTCCAAACATTGCAAGAGAGAGGGATGCTTGCAGATTTTGTCCTTTGCATAGGGGATGACAGGTCAGACGAGGACATGTTCGAAGTGATAACAGGTTCAAGGGCTTCTTTTTCTTCAGTTGCAGAAGTCTTTGCTTGCACTGTAGGACAAAAACCGAGCAAGGCCAAATACTTCTTGGAAGACACACACGAGATCTTAAGGATGTTACAAGGTCTTTCCAATATCTCAGAGCAGGCTACTAAAATTGCTTCCCAATCACCGCGTTCACATGTACCCGCTGAGAGTAATTAG 2580 42.98 MGSRSYSNLLELASGGSPTFGREKKRLPRVATFAGVLSELDDEDNNSTGSNAPSLSQERVIIVGNQLPLRLHKENNGAWNISWDEDSLLLQLKDGLGEDVEVIYVGCLKEEINPSEQDNMAQNLLNTFKCVPTFLPRDLFTKFYHGFCKQYLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADTIMEVISPDDDFVWVHDYHLMVLPTFLRKRFNMVKLGFFLHSPFPSSEIYRTLPVRDELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYQSKRGYIGLEYYGRNVSIKILPVGIHIGQLQSALDLPETESKVAELRDRFRGRTVLLGVDDMDIFKGISLKLLAMEQLLIQHPDKRGMVVLVQIANPARGRGKDVQEIVTETNATVNRINETFKRPGYEPVVLINTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYVICRQGNVKLDETIGLNPSAAKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVAEAMDSALVLSDGEKQLRHEKHYRYVSTHDVSYWARSFLQDLGRACGDHVMRRCWGIGFGLGFRVVALDPNFRKLSVEHIVSVYKRTKKRAILVDYDGTMMLRCSISKSPSMEAVEILNILCKDPNNVVFLVSGRDRKTLSEWFSSCEQLGLAAEHGYYFRPNHSADWETCVAVPDFDWKQIAEPVMHLYTETTDGSTIETKESALVWNYMYADPDFASCQAKELLEHLESVLANEPVSVKSGQYIVEVKPQGVNKGIVAERLLQTLQERGMLADFVLCIGDDRSDEDMFEVITGSRASFSSVAEVFACTVGQKPSKAKYFLEDTHEILRMLQGLSNISEQATKIASQSPRSHVPAESN 859
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 5022593 5026824 + Conep08aG0061500.1 Cone8ag0594 443143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag0594 859 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 24 838 IPR001830 GO:0003824(InterPro)|GO:0004805(PANTHER)|GO:0005829(PANTHER)|GO:0005992(PANTHER)|GO:0005992(InterPro)|GO:0070413(PANTHER)
Cone8ag0594 859 NCBIfam trehalose-phosphatase 588 835 IPR003337 GO:0005992(InterPro)
Cone8ag0594 859 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 52 310 - -
Cone8ag0594 859 Pfam Trehalose-phosphatase 593 825 IPR003337 GO:0005992(InterPro)
Cone8ag0594 859 Gene3D Glycogen Phosphorylase B; 311 527 - -
Cone8ag0594 859 FunFam Alpha,alpha-trehalose-phosphate synthase 312 527 - -
Cone8ag0594 859 NCBIfam HAD-IIB family hydrolase 592 793 IPR006379 -
Cone8ag0594 859 SUPERFAMILY HAD-like 590 835 IPR036412 -
Cone8ag0594 859 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 719 848 - -
Cone8ag0594 859 CDD GT20_TPS 59 542 IPR001830 GO:0003824(InterPro)|GO:0005992(InterPro)
Cone8ag0594 859 Gene3D - 589 706 IPR023214 -
Cone8ag0594 859 Gene3D - 718 851 IPR023214 -
Cone8ag0594 859 Gene3D Glycogen Phosphorylase B; 52 310 - -
Cone8ag0594 859 Pfam Glycosyltransferase family 20 59 542 IPR001830 GO:0003824(InterPro)|GO:0005992(InterPro)
Cone8ag0594 859 CDD HAD_TPP 591 827 - -
Cone8ag0594 859 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 589 706 - -
Cone8ag0594 859 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 59 545 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone5ag1644 Cone-Chr5:11621706 Cone8ag0594 Cone-Chr8:5022593 0 dispersed
Cone6ag0210 Cone-Chr6:992992 Cone8ag0594 Cone-Chr8:5022593 4.37E-136 dispersed
Cone6ag0352 Cone-Chr6:1717486 Cone8ag0594 Cone-Chr8:5022593 0 dispersed
Cone8ag0594 Cone-Chr8:5022593 Cone9ag0238 Cone-Chr9:1015255 7.31E-141 dispersed
Cone8ag0594 Cone-Chr8:5022593 Cone9ag0385 Cone-Chr9:1756657 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag0594 K16055 - rcu:8289077 1472.6