Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag0595 ATGACCCACGAAGGTTCATCACATTCAGGCAACGGATCAGAGACGGGTTCGATGAAGAAGAAGACCGAAGGAATGGAAGAGGAAAAGAAGAAGGAGGAGCAGAAGAAAGTTCCGCTGCTTAAGCTCTTTGCATTTGCTGATTTCTTTGATTATTTTCTAATGGCCGTCGGATCAGTGGGTGCATGCATACATGGCGCTTCTGTTCCTGTTTTCTTTATCTTCTTCGGCAAGTTGATCAATATAATTGGCTTGGCTTATTTCTTCCCTAAAGAAGCAGCTCCTAAAGTTGCCAAGTATTCGTTGGATTTTGTATACCTGAGCGTGGCTATATTATTTTCATCTTGGACAGAGGTGGCTTGTTGGATGTATACTGGTGAACGACAGTGTTCAAAAATGAGAATGGCATATCTAAGGTCGATGCTGAATCAAGATATTAGCCTTTTTGACACAGAAGCTTCTACTGGAGAAGTTATTGCTGCAATTACCACTGATATTGTGGTCGTTCAAGATGCTATTTCTGAGAAGGTAGGGAATTTCATGCACTACATAAGCAGGTTTTTGTCAGGGTTCATAATTGGGTTTGTAAAGGTTTGGCAAATAAGTCTGGTTACATTATCTATCGTCCCCTTAATTGCCCTTGCCGGAGGTCTCTATGCGTTCGTCACTATCGGTCTTATTGCCAAGGTTCGCAAATCCTATGTCAAGGCTGGTGAAATAGCGGAAGAGATCCTAGGAAACGTCAGAACAGTGCAGGCATTTGCTGGAGAAGAGATGGCAGTGAGATCATACAAAGAAGCTCTAAGTAATACATACATGTATGGGAGGAAAGCAGGATTAGCAAAGGGTTTGGGACTGGGATCCATGCACTGTGTTCTCTTTTTCTCATGGGCACTGCTTGTTTGGTTCACTAGCATTGTCGTTCACAAGGATATTTCCAACGGCGGCGAGTCCTTCACCACCATGCTAAATGTTGTTATTGCTGGCCTCTCACTTGGGCAGGCTGCCCCAGATATTACGGCGTTTGTGAGAGCAAAGGCAGCAGCTTACCCAATATTTGAGATGATAGAGAGGAACACGATGACCAAAACCAGCTCGAAAGCTAATGGCAGAACACTAGAAAAGCTTGAAGGAAACATTCAGTTTGACGATGTCTGCTTTAGTTACCCATCTCGTCCGGATGTTTTTATTTTCGACAAGTTCAGTCTTGATATTCAGGCGGGCAAAATTGTTGCCCTTGTTGGAGGAAGTGGGTCCGGGAAAAGTACTGTCATATCGTTGATTGAACGATTCTATGAACCTCTTTCCGGACAAATACTGTTAGATGGTCATAATGTGAGAGAACTCGACCTCAAGTGGCTTAGGCAACAAATTGGACTAGTTAATCAAGAACCGGCTCTTTTCGCAACGACCATCAGAGAGAACATTTTATACGGAAAAGACGATGCTACCCTCGACGAGATCACACGTGCATCAAAACTTTCAGAGTCTCTCTCTTTCATAAACAACCTCCCTGAGAGATTTGAAACTCAGGTTGGCGAAAGAGGAGTACAACTATCAGGTGGACAAAAGCAAAGAATTGCAATAGCTCGCGCAATAGTGAAAAATCCACCGATCCTATTGTTGGATGAAGCAACAAGTGCATTGGATGCAGAATCCGAGAAGAGTGTTCAAGATGCACTGGATCGGGCCATGGTGGGCCGAACAACTGTCATGGTGGCCCACCGTCTATCTACCATAAGGAATGCTGATATGATTGCTGTTGTTCAAGAGGGAAAGATAGTAGAAACTGGAAGCCATGAGGAGCTCATTTCGAAGCCGAACAGTGCTTATGCTTCTCTTGTTCAGCTCCAAGAGGCAGTATCTTTGCAGCGCTACACTTCTGTCGGGCCTAATTTGGGCCTGTCACCAAGTATAAAGTATTCTCGGGAATTATCTCGCACTAGAACAAGCTTTGGTGCTAGTTTCAACTCTGAAAGGGAATCTGCTGGAGGCATTGGTGCGGATGAATTGAAAGCGGGAAAGCCAAAGCGTGTTTCAAGTAGAAGGCTCTACTCTATGGTGAGGCCGGACTGGGTTTATGGAGTCGTAGGCACTATCTGTGCATTTATTGCAGGGTCCCAAATGCCTCTCTTCGCTCTAGGCGTCTCTCAAGCTCTTGTTTCTTTTTATATGGAATGGGACCAAACCCGACGTGAGATCAGAAAAATTGCTTTTCTCTTCTGTGGGGCATCAGTTATAACTGTCATAGTTCATGCCATTGAACATCTCTGTTTTGGAATTATGGGAGAAAGGCTCACCCTCCGTGTTCGAGAAAAAATGTTTTCTGCCATATTGAGGAATGAGATAGGGTGGTTTGACAACATAGAAAATACAAGTGGAATCCTTTCTTCCCGATTAGAGAGTGATGCAACTCTGTTAAGATCACTAGTTGTGGATCGGTCTACCATTCTTTTACAAAATGTGGGTCTGGTTGTTGCCTCATTTATCATTGCCTTCATCTTAAATTGGAGGCTCACACTTGTTGTCTTGGCGACTTATCCATTGATAGTCAGTGGTCACATAAGCGAGAAACTTTTCATGCAAGGCTATGGAGGTAACTTGAGCAAAGCATATCTTAAGGCTAACATGCTGGCTGGAGAGGCTGTTAGTAACATCCGAACTGTTGCTGCATTTTGCTCAGAAGAAAAGGTGCTTGATCTTTACTCACAGGAGCTTGTAGAGCCTTCTAGGCGGTCACTTGTTCGTGGTCAGATTGCTGGCATATTCTATGGTGTCTCTCAATTCTTCATCTTCTCATCCTATGGCTTGGCCTTATGGTATGGTTCGGTTTTGATGGGAAAGGAGCTAGCTAGCTTTAAATCTGTGATGAAGTCATTTATGGTTCTAATAGTAACTGCCTTAGCCATGGGTGAGACTTTAGCTCTAGCCCCCGACCTATTGAAGGGAAACCAAATGGTTGCATCAGTCTTTGAGGTTATGGACCGCCAGACAGAGGTGTCAGGAGATGTAGGCGAAGAGCTAACTACAGTGGAAGGTTTGATTGAGTTAAGGGGAGTCGAATTTAGATATCCCTCCAGACCAGATGCAGTGATTTTCAGAGATTTCAATCTTCAAGTTCGAGCGGGGAAGAGTATGGCATTAGTTGGACAAAGTGGGTCCGGTAAAAGCTCAGTACTTTCTCTCATACTCCGATTTTATGACCCCACAACCGGAAGAGTCATGATTGACGGGAAGGACATAAAGAAATTAAAGCTGAAATCTCTGAGGAAACACATTGGTCTGGTACAACAAGAACCGTCACTTTTCGGCACATCAATTTACGAAAACATTATATATGGAAAGGAAGGAGCCTCTGAAGGAGAAGTGATGGAAGCAGCCAAGCTTGCTAATGCTCACAGTTTTATTAGTGCCTTACCTGAGGGTTACTCGACAAAAGTGGGTGAAAGAGGAGTGCAACTTTCCGGTGGCCAGAGACAAAGGGTAGCCATTGCTCGAGCCATCTTAAAGAACCCGGAAATCTTATTGCTAGATGAAGCCACTAGTGCTCTTGATGTTGAATCCGAGCGAGTGGTCCAACAAGCTCTTGATCGGTTAATGAAAAACCGGACAACAATAATGGTAGCTCATAGGCTATCTACCATAAAAAATGCTGACCAAATATCGGTTATACAAGATGGTAGGATAATCGAGCAGGGATCACATGAGTCTCTGATAGACAATAGGAATGGGGCTTATTATAAGCTGATTAATATTCAGCAACAGCAGTAG 3768 43.9 MTHEGSSHSGNGSETGSMKKKTEGMEEEKKKEEQKKVPLLKLFAFADFFDYFLMAVGSVGACIHGASVPVFFIFFGKLINIIGLAYFFPKEAAPKVAKYSLDFVYLSVAILFSSWTEVACWMYTGERQCSKMRMAYLRSMLNQDISLFDTEASTGEVIAAITTDIVVVQDAISEKVGNFMHYISRFLSGFIIGFVKVWQISLVTLSIVPLIALAGGLYAFVTIGLIAKVRKSYVKAGEIAEEILGNVRTVQAFAGEEMAVRSYKEALSNTYMYGRKAGLAKGLGLGSMHCVLFFSWALLVWFTSIVVHKDISNGGESFTTMLNVVIAGLSLGQAAPDITAFVRAKAAAYPIFEMIERNTMTKTSSKANGRTLEKLEGNIQFDDVCFSYPSRPDVFIFDKFSLDIQAGKIVALVGGSGSGKSTVISLIERFYEPLSGQILLDGHNVRELDLKWLRQQIGLVNQEPALFATTIRENILYGKDDATLDEITRASKLSESLSFINNLPERFETQVGERGVQLSGGQKQRIAIARAIVKNPPILLLDEATSALDAESEKSVQDALDRAMVGRTTVMVAHRLSTIRNADMIAVVQEGKIVETGSHEELISKPNSAYASLVQLQEAVSLQRYTSVGPNLGLSPSIKYSRELSRTRTSFGASFNSERESAGGIGADELKAGKPKRVSSRRLYSMVRPDWVYGVVGTICAFIAGSQMPLFALGVSQALVSFYMEWDQTRREIRKIAFLFCGASVITVIVHAIEHLCFGIMGERLTLRVREKMFSAILRNEIGWFDNIENTSGILSSRLESDATLLRSLVVDRSTILLQNVGLVVASFIIAFILNWRLTLVVLATYPLIVSGHISEKLFMQGYGGNLSKAYLKANMLAGEAVSNIRTVAAFCSEEKVLDLYSQELVEPSRRSLVRGQIAGIFYGVSQFFIFSSYGLALWYGSVLMGKELASFKSVMKSFMVLIVTALAMGETLALAPDLLKGNQMVASVFEVMDRQTEVSGDVGEELTTVEGLIELRGVEFRYPSRPDAVIFRDFNLQVRAGKSMALVGQSGSGKSSVLSLILRFYDPTTGRVMIDGKDIKKLKLKSLRKHIGLVQQEPSLFGTSIYENIIYGKEGASEGEVMEAAKLANAHSFISALPEGYSTKVGERGVQLSGGQRQRVAIARAILKNPEILLLDEATSALDVESERVVQQALDRLMKNRTTIMVAHRLSTIKNADQISVIQDGRIIEQGSHESLIDNRNGAYYKLINIQQQQ 1255
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 5053599 5058927 - Conep08aG0061600.1 Cone8ag0595 443144
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag0595 1255 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 370 617 IPR027417 -
Cone8ag0595 1255 FunFam ABC transporter B family member 1 41 376 - -
Cone8ag0595 1255 Pfam ABC transporter 398 546 IPR003439 GO:0005524(InterPro)|GO:0016887(InterPro)
Cone8ag0595 1255 CDD ABC_MTABC3_MDL1_MDL2 379 617 - -
Cone8ag0595 1255 SMART AAA_5 406 598 IPR003593 GO:0016887(InterPro)
Cone8ag0595 1255 SMART AAA_5 1041 1213 IPR003593 GO:0016887(InterPro)
Cone8ag0595 1255 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 695 981 IPR011527 GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:0140359(InterPro)
Cone8ag0595 1255 Pfam ABC transporter transmembrane region 696 966 IPR011527 GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:0140359(InterPro)
Cone8ag0595 1255 Pfam ABC transporter transmembrane region 59 326 IPR011527 GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:0140359(InterPro)
Cone8ag0595 1255 ProSitePatterns ABC transporters family signature. 518 532 IPR017871 GO:0005524(InterPro)|GO:0016887(InterPro)
Cone8ag0595 1255 SUPERFAMILY ABC transporter transmembrane region 42 348 IPR036640 GO:0005524(InterPro)|GO:0016020(InterPro)
Cone8ag0595 1255 CDD ABC_6TM_Pgp_ABCB1_D2_like 684 999 - -
Cone8ag0595 1255 FunFam ABC transporter B family member 4 1004 1255 - -
Cone8ag0595 1255 Gene3D ABC transporter type 1, transmembrane domain 41 623 IPR036640 GO:0005524(InterPro)|GO:0016020(InterPro)
Cone8ag0595 1255 ProSitePatterns ABC transporters family signature. 1153 1167 IPR017871 GO:0005524(InterPro)|GO:0016887(InterPro)
Cone8ag0595 1255 FunFam ABC transporter B family member 19 369 618 - -
Cone8ag0595 1255 Gene3D ABC transporter type 1, transmembrane domain 638 857 IPR036640 GO:0005524(InterPro)|GO:0016020(InterPro)
Cone8ag0595 1255 CDD ABC_MTABC3_MDL1_MDL2 1014 1252 - -
Cone8ag0595 1255 CDD ABC_6TM_Pgp_ABCB1_D1_like 54 351 - -
Cone8ag0595 1255 Gene3D - 369 618 IPR027417 -
Cone8ag0595 1255 Gene3D - 1004 1253 IPR027417 -
Cone8ag0595 1255 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 55 343 IPR011527 GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:0140359(InterPro)
Cone8ag0595 1255 PANTHER ABC TRANSPORTER B FAMILY 13 639 IPR039421 GO:0005887(PANTHER)|GO:0042626(PANTHER)
Cone8ag0595 1255 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1008 1252 IPR027417 -
Cone8ag0595 1255 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 379 615 IPR003439 GO:0005524(InterPro)|GO:0016887(InterPro)
Cone8ag0595 1255 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1014 1250 IPR003439 GO:0005524(InterPro)|GO:0016887(InterPro)
Cone8ag0595 1255 MobiDBLite consensus disorder prediction 1 32 - -
Cone8ag0595 1255 MobiDBLite consensus disorder prediction 1 18 - -
Cone8ag0595 1255 Gene3D ABC transporter type 1, transmembrane domain 918 1003 IPR036640 GO:0005524(InterPro)|GO:0016020(InterPro)
Cone8ag0595 1255 SUPERFAMILY ABC transporter transmembrane region 676 995 IPR036640 GO:0005524(InterPro)|GO:0016020(InterPro)
Cone8ag0595 1255 Pfam ABC transporter 1033 1181 IPR003439 GO:0005524(InterPro)|GO:0016887(InterPro)
Cone8ag0595 1255 FunFam ABC transporter B family member 2 815 1011 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone2ag0187 Cone-Chr2:985768 Cone8ag0595 Cone-Chr8:5053599 0 dispersed
Cone3ag0259 Cone-Chr3:1358853 Cone8ag0595 Cone-Chr8:5053599 6.60E-150 dispersed
Cone5ag0291 Cone-Chr5:1230611 Cone8ag0595 Cone-Chr8:5053599 4.52E-281 dispersed
Cone6ag0923 Cone-Chr6:4731636 Cone8ag0595 Cone-Chr8:5053599 9.12E-88 dispersed
Cone7ag1900 Cone-Chr7:12180404 Cone8ag0595 Cone-Chr8:5053599 0 dispersed
Cone8ag0595 Cone-Chr8:5053599 Cone9ag0928 Cone-Chr9:4549763 0 dispersed
Cone12ag0582 Cone-Chr12:4535622 Cone8ag0595 Cone-Chr8:5053599 0 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag0595 K05658 - csv:101219304 2008.42