Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone8ag0599 | ATGGAGAGAGGAGCAACAGCACTGTCAGCGATGGAGGCGTTTGAAAAGCTAGAGAAAGTTGGAGAAGGAACGTACGGGAAGGTGTACAGAGCAAGAGAGAAGGCGACTGGGAAGATCGTCGCCCTCAAGAAGACTCGCCTGCACGAGGATCAGGAAGGCGTCCCTCCAACAACTCTTCGGGAGATCTCCATTCTCCGTATGCTGTCCAGAGATCCTCACATCGTCAAGTTGATGGATGTCAAGCAAGGTCAGAATAAAGAAGGAAATACGGTGCTGTATTTGGTGTTTGAGTACATGGACACGGATCTTAAGAAATATATCAGGAGTTTTCGTCAATCTGGAGAAAACATTCCCGTTAACACTGTCAAGAGTCTGATGTTCCAACTCTGCAAAGGGGTTGCTTTTTGTCATGGCCATGGGATCTTACACAGAGATCTGAAACCTCACAATCTGCTGATGAACCGGAAGACAATGATGCTTAAGATTGCAGATCTTGGGCTGGCTCGAGTGTTTACTGTTCCCGTTAAGAAGTATACACATGAGATATTGACCCTCTGGTATAGAGCTCCTGAAGTTCTCCTGGGCTCTACGCATTACTCAACTGCAGTAGATATCTGGTCTGTTGGCTGCATTTTTGCTGAACTAGTTACCAAGCAAGCACTCTTCCAAGGGGATTCCGAGCTGCAACAACTTCTGCATATATTTAGGTTATTGGGAACCCCAAATGAAGAAATGTGGCCAGGAGTCAGCAAATTATTAAACTGGCATGAGTACCCTCAGTGGAGCCCACGGAGCCTTTCCACTGCTGTTCCTAACCTCGACGAAGAGGGCCTTCATCTCTTGTCGCAGATGTTGCTGTACGAGCCTTCCAAGAGGATTTCAGCAAAAAAAGCTATGGAACATCCTTACTTCGATCTTGTGAACAAGGCCTCTGCATGA | 939 | 46.86 | MERGATALSAMEAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDQEGVPPTTLREISILRMLSRDPHIVKLMDVKQGQNKEGNTVLYLVFEYMDTDLKKYIRSFRQSGENIPVNTVKSLMFQLCKGVAFCHGHGILHRDLKPHNLLMNRKTMMLKIADLGLARVFTVPVKKYTHEILTLWYRAPEVLLGSTHYSTAVDIWSVGCIFAELVTKQALFQGDSELQQLLHIFRLLGTPNEEMWPGVSKLLNWHEYPQWSPRSLSTAVPNLDEEGLHLLSQMLLYEPSKRISAKKAMEHPYFDLVNKASA | 312 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 5164999 | 5167271 | - | Conep08aG0062000.1 | Cone8ag0599 | 443148 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone8ag0599 | 312 | Pfam | Protein kinase domain | 14 | 304 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone8ag0599 | 312 | Gene3D | Transferase(Phosphotransferase) domain 1 | 101 | 312 | - | - | |
Cone8ag0599 | 312 | SMART | serkin_6 | 14 | 304 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone8ag0599 | 312 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 141 | 153 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone8ag0599 | 312 | FunFam | Cyclin-dependent kinase B2,2 | 10 | 100 | - | - | |
Cone8ag0599 | 312 | SUPERFAMILY | Protein kinase-like (PK-like) | 9 | 305 | IPR011009 | - | |
Cone8ag0599 | 312 | ProSiteProfiles | Protein kinase domain profile. | 14 | 304 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone8ag0599 | 312 | Gene3D | Phosphorylase Kinase; domain 1 | 9 | 100 | - | - | |
Cone8ag0599 | 312 | ProSitePatterns | Protein kinases ATP-binding region signature. | 20 | 43 | IPR017441 | GO:0005524(InterPro) | |
Cone8ag0599 | 312 | PANTHER | CELL DIVISION PROTEIN KINASE | 14 | 304 | IPR050108 | GO:0000082(PANTHER)|GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0004693(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER)|GO:0010033(PANTHER)|GO:0010389(PANTHER)|GO:0010468(PANTHER)|GO:0030332(PANTHER) | |
Cone8ag0599 | 312 | FunFam | Cyclin-dependent kinase 2 | 102 | 311 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone8ag0599 | Cone-Chr8:5164999 | Cone8ag0731 | Cone-Chr8:7347584 | 4.73E-83 | dispersed | |
Cone7ag1950 | Cone-Chr7:12440276 | Cone8ag0599 | Cone-Chr8:5164999 | 1.86E-212 | transposed | |
Cone12ag0587 | Cone-Chr12:5045694 | Cone8ag0599 | Cone-Chr8:5164999 | 6.57E-220 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
83113 | PF03908 | Sec20 | 3.00E-07 | CL0147 | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone8ag0599 | K07760 | - | rcu:8273672 | 571.237 |