Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag0609 ATGGCTGGCTCCTGGAGGCCGTCTTTGATCGTCCCTGCAATCCTTTTCTTCGGATTCCTATTTGCATTTTCCATTGCGAAAGAGGAAGCAACAAAGTTGGGAACAGTCATCGGGATAGATCTTGGAACAACTTATTCCTGTGTTGGAGTTTATAAGAACGGACATGTTGAAATCATAGCTAATGACCAGGGGAATCGTATTACCCCATCATGGGTTGCTTTCACTGACAGTGAGAGATTGATTGGTGAGGCGGCGAAGAATCAAGCTGCTGTCAATCCTGAGAGGACTGTCTTTGATGTCAAGAGACTTATCGGAAGAAAGTTTGATGACAAAGAAGTTCAGAAGGATATGAAGCTTGTTCCATATAAAATTGTGAATAGGGATGGAAAGCCTTACATTCAAGTCAAGATCAAGGATGGTGAGACCAAAGTTTTCAGCCCTGAGGAGGTCAGTGCCATGATTCTGACTAAGATGAAGGAAACAGCCGAAGCATTTTTAGGGAAGAAAATCAAGGATGCTGTTGTTACAGTTCCTGCTTACTTTAATGATGCCCAGAGGCAGGCCACTAAAGATGCCGGTGTCATTGCCGGGCTCAATGTTGCAAGAATTATAAACGAACCAACTGCAGCTGCCATAGCCTATGGATTGGACAAGAAAGGTGGTGAGAAGAACATTCTTGTATTTGACCTTGGTGGTGGGACATTCGATGTCAGTATCTTGACAATTGACAATGGCGTCTTTGAGGTTCTTGCAACAAATGGAGACACTCATTTGGGAGGTGAGGATTTCGATCAGAGGATTATGGAGTACTTCATTAAGTTGATAAAGAAGAAGCACGGAAAGGACATCAGCAAGGACAACAGAGCTCTTGGAAAGCTAAGAAGGGAAGCTGAGCGTGCCAAAAGAGCATTGAGTAGCCAGCACCAGGTCCGAGTGGAGATTGAATCTCTTTTTGATGGAGTAGACCTCTCTGAGCCACTGACCAGAGCTCGTTTTGAAGAGCTCAACAATGACTTGTTCAGAAAGACCATGGGGCCTGTGAAGAAGGCAATGGACGATGCAGGGTTGGAGAAGAACCAAATCGATGAGATTGTCCTTGTTGGTGGAAGTACCAGGATTCCAAAAGTCCAACAACTTCTGAAGGATTACTTTGATGGCAAAGAACCCAACAAGGGTGTGAACCCTGATGAAGCAGTTGCTTATGGTGCTGCTGTACAGGGAAGCATCTTAAGTGGAGAAGGTGGTGATGAGACTAAAGATATTCTTCTCCTAGATGTCGCTCCACTTACCCTTGGAATTGAAACCGTTGGTGGAGTGATGACCAAGTTGATCCCCCGAAACACTGTTATTCCCACAAAGAAATCCCAGGTTTTCACCACTTATCAGGATCAGCAGACAACTGTCTCTATTCAGGTCTTCGAGGGTGAAAGGAGTCTCACAAAGGACTGTAGGAATCTTGGAAAATTTGACTTGAGCGGAATCCCACCAGCTCCAAGAGGAACCCCTCAAATCGAAGTCACGTTTGAAGTGGATGCAAATGGAATCTTAAACGTCAAGGCGGAAGACAAGGGCACTGGAAAATCTGAGAAAATCACTATCACAAATGACAAGGGCCGATTGAGCCAGGAGGAGATTGAACGGATGGTGAAAGAAGCAGAAGAGTTTGCAGAGGAAGATAAGAAGGTGAAAGAGAGGATTGATGCTCGTAACAGCCTTGAGACCTATGTCTACAATATGAAGAACCAGATCAATGACAAGGACAAGCTTGCTGATAAGCTCGAGTCTGATGAGAAGGAGAAGATCGAGACTGCAGTTAAAGAAGCTCTTGAATGGTTGGATGACAATCAGACCTCTGAGAAAGAGGATTATGAGGAGAAGCTCAAGGAGGTGGAAGCTGTGTGTAATCCGATCATCACTGCTGTCTATCAGAGATCTGGTGGGGCGCCAGGCGGTGGAGCTGCTGATTCGGGGGAAGATGACGATTCTCATGACGAGCTTTGA 2001 45.33 MAGSWRPSLIVPAILFFGFLFAFSIAKEEATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPERTVFDVKRLIGRKFDDKEVQKDMKLVPYKIVNRDGKPYIQVKIKDGETKVFSPEEVSAMILTKMKETAEAFLGKKIKDAVVTVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLATNGDTHLGGEDFDQRIMEYFIKLIKKKHGKDISKDNRALGKLRREAERAKRALSSQHQVRVEIESLFDGVDLSEPLTRARFEELNNDLFRKTMGPVKKAMDDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGSILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRNLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIERMVKEAEEFAEEDKKVKERIDARNSLETYVYNMKNQINDKDKLADKLESDEKEKIETAVKEALEWLDDNQTSEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGGGAADSGEDDDSHDEL 666
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 5761574 5765982 - Conep08aG0063000.1 Cone8ag0609 443158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag0609 666 Gene3D Actin; Chain A, domain 4 259 342 - -
Cone8ag0609 666 FunFam Luminal-binding protein 5 569 644 - -
Cone8ag0609 666 Coils Coil 545 565 - -
Cone8ag0609 666 MobiDBLite consensus disorder prediction 643 666 - -
Cone8ag0609 666 ProSitePatterns Heat shock hsp70 proteins family signature 2. 227 240 IPR018181 -
Cone8ag0609 666 PRINTS 70kDa heat shock protein signature 361 377 - -
Cone8ag0609 666 PRINTS 70kDa heat shock protein signature 393 413 - -
Cone8ag0609 666 PRINTS 70kDa heat shock protein signature 233 243 - -
Cone8ag0609 666 PRINTS 70kDa heat shock protein signature 420 439 - -
Cone8ag0609 666 PRINTS 70kDa heat shock protein signature 35 48 - -
Cone8ag0609 666 PRINTS 70kDa heat shock protein signature 63 75 - -
Cone8ag0609 666 PRINTS 70kDa heat shock protein signature 85 93 - -
Cone8ag0609 666 PRINTS 70kDa heat shock protein signature 173 193 - -
Cone8ag0609 666 PRINTS 70kDa heat shock protein signature 501 517 - -
Cone8ag0609 666 FunFam Heat shock protein ssb1 98 153 - -
Cone8ag0609 666 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 415 569 IPR029047 -
Cone8ag0609 666 SUPERFAMILY Actin-like ATPase domain 34 218 IPR043129 -
Cone8ag0609 666 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 567 650 IPR029048 -
Cone8ag0609 666 Coils Coil 283 303 - -
Cone8ag0609 666 Gene3D - 37 408 - -
Cone8ag0609 666 PANTHER HSC70CB, ISOFORM G-RELATED 34 645 IPR050451 GO:0005634(PANTHER)|GO:0005829(PANTHER)|GO:0006457(PANTHER)
Cone8ag0609 666 Coils Coil 613 633 - -
Cone8ag0609 666 SUPERFAMILY Actin-like ATPase domain 221 412 IPR043129 -
Cone8ag0609 666 CDD HSPA5-like_NBD 34 408 IPR042050 -
Cone8ag0609 666 FunFam Heat shock protein 70 37 224 - -
Cone8ag0609 666 Pfam Hsp70 protein 36 643 IPR013126 GO:0005524(InterPro)|GO:0140662(InterPro)
Cone8ag0609 666 Gene3D - 570 644 IPR029048 -
Cone8ag0609 666 FunFam Endoplasmic reticulum chaperone BiP 259 342 - -
Cone8ag0609 666 FunFam Chaperone protein HscA homolog 225 273 - -
Cone8ag0609 666 ProSitePatterns Heat shock hsp70 proteins family signature 1. 39 46 IPR018181 -
Cone8ag0609 666 ProSitePatterns Heat shock hsp70 proteins family signature 3. 364 378 IPR018181 -
Cone8ag0609 666 Gene3D - 219 393 - -
Cone8ag0609 666 Coils Coil 579 599 - -
Cone8ag0609 666 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 417 573 IPR029047 -
Cone8ag0609 666 FunFam Heat shock 70 kDa 415 569 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag1748 Cone-Chr1:58193194 Cone8ag0609 Cone-Chr8:5761574 8.63E-218 dispersed
Cone5ag0040 Cone-Chr5:217216 Cone8ag0609 Cone-Chr8:5761574 0 dispersed
Cone6ag0245 Cone-Chr6:1131529 Cone8ag0609 Cone-Chr8:5761574 1.01E-55 dispersed
Cone7ag0556 Cone-Chr7:2675379 Cone8ag0609 Cone-Chr8:5761574 1.48E-287 dispersed
Cone8ag0609 Cone-Chr8:5761574 Cone8ag1036 Cone-Chr8:9570545 2.52E-141 dispersed
Cone12ag0594 Cone-Chr12:5240009 Cone8ag0609 Cone-Chr8:5761574 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag0609 K09490 - mdm:103452588 1201.42