Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag0618 ATGGGAAACGGACTCTCGAGCGTCTTCTCTTGCTTCAGACCGGCGAACCGGACGAGCGGCGAACCGGAACTGCATCAGCAGGAGGTGATTTTCACGCCGTCCGAGCCCTTGGATGAAACCCTAGGCCACTCCTTCTGCTACGTCCGGTCGTCGGCTCGATTCCTCTCTCCGACTCACTCAAATCGCTTTCCCTCTCCTTCTCACTCTTTCCGTTTCTCGCCCCCTCATGAACCGGGCGCTCCCAAGAATCGGACCGGACCGCCTGAAACCGGGTTCAAGACCATTTCTGGAGCTTCGGTGAGTGCTAATAGCTCTACTCCCAGATCTGTTCTCTTGCTTGAAAATATCTACGACGATGTTACTGAGAATATGCTTGGTGGAGGTGGTGGTGGTATGAGAGGGACTATTATGAACGGCTTTGAAAGTACGTCGTCGTTTAGTGCTCTTCCGCTCCAGCCGGTTCCGAGAGGTGGAGCGGTCGAGCCTTCGGGCCCCATGGAGCGAGGTGGCTTCTTCCTCTCTGGCCCAATCGAGCGTGGGGCCCTTTCAGGTCCACTTGATGCCAACGCTGGCTCGGATGGAGGCGGCGGAAGAGTTCCCTTCTCCGCTCCGCTTGGTGGCCTTTACGTAAAAAAGAAGCGTAAGAAGGGCATTTTGGGGATCCACAAGGCATTTTACAGAAATTTCTCGGAGAAGCGGCCGTGGGTGGTTCCGGTCCTCAATTTTGTCGGCCGGAGAGATGAATCAACGGCTGGTGATGAGTCCGAGGAGAAAATGGAGAGTAATGTTCAATGGGCCCTGGGAAAAGCAGGGGAGGATCGGGTACATGTAGTTGTATCGGAAGAGCAAGGGTGGTTGTTTGTTGGGATTTATGATGGATTCAATGGCCCTGAGGCACCCGAGTTCTTAATGGGTAATCTGTATCGAGCGGTCTATAGTGAACTTCAAGGATTGTTTTGGGAGGTTGATGAATCAGAGGAGGGATCCAATGCTAATTATAATAGCCAGTCAAATGTTGATGCAGAAATTGCAGTATTTGAAAACAATGTGTACCCACCTGCTCCTCCTGATCAAGGGTCAACAAAGAGAGTTACATTTCAATCCGATGCTGGATCGAAGAATAGGGTGAGGAGGAGGCGTCTATGGGAATTTTTAGCTGAGGATGATCCTGAATATGGGCTTGACCTCTCAGGTTCGGATAGATTTGCATTTTCAGTAGATGATGCGATAAGTGTAAAGAATGCAGGTTCAGCTGTTAGTAGAAGATGGCTTTTGCTATCGAAACTAAAACATGGGTTATCTAAGCATAGGGGGGAGGGCCATGGTAGAAAGTTGTTTCCATGGAAGTTTGGGTTGGAGGAGAAGGAGAAGGTTGAAGCTGAGAGTAGGGTAGAGGAGAGGTCGGCACGAGCAGGTAAGAAGAGAAAGGAAGGTCCTATAAACCATGAGTTAGTTTTGGGTGCCTTGTCGAGGGCTCTTGAAGTGACGGAGCTTGCATATTTGGATATGACGGATAAGGTGCTTGATACTAGTCCGGAGCTTGCTTTGATGGGGTCTTGCTTATTGGCGGTTTTGATGAGAGATGAGGATGTTTATGTTATGAATGTTGGCGATAGTCGAGCAATAGTTGCTCATTATGAGCCACAAGAAGTGGGTCCCAGCAGGGAGGGAAAGGGAGAACACCGGTCGGGCCAAGAGGGGGGTATAGTTGAGGAGTTGCTGGGTCCAAGTGAAAAGGAAATAACATTAGGGAATGAGGCTTCTACTCAAGAAATGAGATTGGCTGCATTGCAGTTATCTACAGATCATAGCACAAGCATTGAAGAAGAAGTCATAAGAATCAAGAATGAACACCCAGATGACAAACAGTGCATCATCAACGATAGAGTGAAAGGCCGTCTCAAAGTCACTAGAGCCTTTGGTGCTGGATTTCTAAAACAGCCAAAGTTGAATGCTGCATTATTAGAGATGTTTCGTAATGAGTATATTGGTACCGCACCGTACTTATCATGCTCACCTTCACTTCGGCACCATAGACTATGCCCTAGAGATCAGTTCTTAGTCCTCTCATCAGACGGTTTATATCAATATCTAAGCAATCAGGAAGTGGTTTCTCACGTAGAGAATTTTATGGAGAAGTATCCAGATGGAGACCCAGCACAACACCTAATAGAGGAGCTTCTTAACCGTGCAGCCAGAAAAGCTGGGATGGAATTTCATGAATTGTTAGACATACCACAGGGAGACAGAAGAAAGTACCATGATGATGTTACTGTTATGATTATATCTCTTGAAGGAAGAATTTGGAAATCTTCAGGAAAATACCTTTAA 2331 47.7 MGNGLSSVFSCFRPANRTSGEPELHQQEVIFTPSEPLDETLGHSFCYVRSSARFLSPTHSNRFPSPSHSFRFSPPHEPGAPKNRTGPPETGFKTISGASVSANSSTPRSVLLLENIYDDVTENMLGGGGGGMRGTIMNGFESTSSFSALPLQPVPRGGAVEPSGPMERGGFFLSGPIERGALSGPLDANAGSDGGGGRVPFSAPLGGLYVKKKRKKGILGIHKAFYRNFSEKRPWVVPVLNFVGRRDESTAGDESEEKMESNVQWALGKAGEDRVHVVVSEEQGWLFVGIYDGFNGPEAPEFLMGNLYRAVYSELQGLFWEVDESEEGSNANYNSQSNVDAEIAVFENNVYPPAPPDQGSTKRVTFQSDAGSKNRVRRRRLWEFLAEDDPEYGLDLSGSDRFAFSVDDAISVKNAGSAVSRRWLLLSKLKHGLSKHRGEGHGRKLFPWKFGLEEKEKVEAESRVEERSARAGKKRKEGPINHELVLGALSRALEVTELAYLDMTDKVLDTSPELALMGSCLLAVLMRDEDVYVMNVGDSRAIVAHYEPQEVGPSREGKGEHRSGQEGGIVEELLGPSEKEITLGNEASTQEMRLAALQLSTDHSTSIEEEVIRIKNEHPDDKQCIINDRVKGRLKVTRAFGAGFLKQPKLNAALLEMFRNEYIGTAPYLSCSPSLRHHRLCPRDQFLVLSSDGLYQYLSNQEVVSHVENFMEKYPDGDPAQHLIEELLNRAARKAGMEFHELLDIPQGDRRKYHDDVTVMIISLEGRIWKSSGKYL 776
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 6075605 6082003 + Conep08aG0063900.1 Cone8ag0618 443167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag0618 776 ProSiteProfiles PPM-type phosphatase domain profile. 256 764 IPR001932 -
Cone8ag0618 776 SMART PP2C_4 256 762 IPR001932 -
Cone8ag0618 776 PANTHER PROTEIN PHOSPHATASE 2C 261 764 IPR015655 GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0006470(PANTHER)
Cone8ag0618 776 MobiDBLite consensus disorder prediction 89 104 - -
Cone8ag0618 776 CDD PP2Cc 481 764 IPR001932 -
Cone8ag0618 776 Pfam Protein phosphatase 2C 598 733 IPR001932 -
Cone8ag0618 776 Gene3D - 245 771 IPR036457 -
Cone8ag0618 776 MobiDBLite consensus disorder prediction 59 104 - -
Cone8ag0618 776 SUPERFAMILY PP2C-like 269 765 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag0643 Cone-Chr1:6164102 Cone8ag0618 Cone-Chr8:6075605 6.09E-140 dispersed
Cone3ag0339 Cone-Chr3:1717551 Cone8ag0618 Cone-Chr8:6075605 2.30E-140 dispersed
Cone5ag1149 Cone-Chr5:5179324 Cone8ag0618 Cone-Chr8:6075605 8.35E-144 dispersed
Cone7ag0155 Cone-Chr7:639726 Cone8ag0618 Cone-Chr8:6075605 1.19E-62 dispersed
Cone12ag0600 Cone-Chr12:5331842 Cone8ag0618 Cone-Chr8:6075605 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag0618 - - - 0.0