Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag0619 ATGGAAATGAAAACAAGGAGAGGAAAACGGTCCGAGGCTTTTTGGCCTTCAATTGTGATGAAAAAATGGTTGAATATTAAGCCCGAGGCTTATGATTTCAGTGAAGATGAAATTGATACTGAAACTGAGAGTGAAGATGATGCTTGCTCTGTTAAAGATGATGAAAGAAAGCAAGTGGATGAGGATCATTCCCATAGAACAAAGTGGAAGAACGAATCTGTTTCTTCAACTCAAATAATAACAGATCACCCGCCTTCTAAGAGCTGTCCCTTCAGACATAGAAGAGGAAAATCAGAGACCATCCGAGCTCAGTACATAAACAAAAAGGATTTGAGGGTGACAATTTGTAGTTGGAATGTTGCTGGAAGATGTCCGGACGAAGATCTCGATTTACACGATTGGCTTTCGACTGACGAGCCGGCAGATATTTACATAATTGGCTTCCAAGAGATAGTACCTTTAAATGCCGGGAATGTGTTGGGAGCAGAAGACAGTAGGCCTATCCCAAAATGGGAATCAACAATTCGGAAAACACTCAATAAATCCTTAGAACCCGAAAGCAAATACAAAAGCTACAGTGCTCCACCTTCTCCGGTGCAAAGAACTTCTTCTGTTGTTGATGTGCTAGTTGATCAAGTCGCCAGTGACTGTCAGTTAAATGCAATTAACGAAGAATATTCTGGCAAGAATTTGGATTTGAAAAGAATCTATGGACTTGATTGTGAGAGTCGACTAGATTGGCTGGAAGTTCCGTTAGATGCAACCCCTCAAATTATAGATTCAAATTTGAAACTCCGCAGAGTACTAAGTAGTTCTGCGAGAATCGGGTTTAATGGGTCTGAGTTCCCTCCGGCTTTTCCTCCTAAAAACCAAATAAATGTTACCACTGCTCTGAAAAGATCTTACCATAGTTCTGGGAATTTAGGATCGATCTGGATGGACCAGCAAGAACAGCGGGAAATTCTTGAATCTCTCTCCGATAACTCCGACAATTTTTTCGAAAGAGAAGAGGACGATAGTTTCATTGAATTACAAAATGACCACCAACAAGCGCATCATGGAACTGTAGCCAAAGAGGGTGTGAAGAAGAAGTCTCGTCCAAGGTATGTTCGGATTGTAAGCAAGCAGATGATAGGGATCTACGTTTCGATTTGGGTTCAGAGGCGGTTGAGAAGACATGTGAACAACTTGAAAGTGTCTCCTGTCGGGGTTGGTTTGATGGGTTACATCGGCAACAAGGGATCGGTTTCGGTTAGTATGTCTCTCTTTCAGTCCCGGCTGTGTTTCGTATGTTCTCATCTGGCATCGGGTCAGAAAGGCGGTGCCGAGCAAAGGCGAAATGAGGATGTTAATGAGATCATTCGACGTACGAGTTTCGACTCTGTGTTTGATGGTAATCAACCACAGACAATTCCATCTCATGATCAGATCTTCTGGTTTGGGGATTTAAATTATCGTCTGAATTTGTTAGACTCGGAGATAAGGAAGCTCGTTACACTGAAACAATGGGATGAACTCATCAAATATGATCAGCTTAGCAGAGAACTCAACACAGGGGGTGTATTTGAGGGATGGAAAGAGGGAGTTATAAACTTCCCTCCAACATATAAATACAAAATCAACTCCGATACATATGTCAGTAAGAACCCGAAAGAGGGAGAGAAGAAACGGTCCCCGGCTTGGTGCGATCGAATACTGTGGCTTGGAAAGGGAATAAGACAAGTGTCTTACGAGCGGGCTGAGATGAGGCTCTCAGATCATCGACCAGTGACATCGATTTTTTCGGTTGAAGTTGAAGTATTAGACCAAAGGAAGTTGCAGAGAGCTCTCATTGTCAATAGTGCAGCAGTACATCCCGAGATTTTCCTCCACGAAAACGGAGAGTTAGACTCTTAA 1896 42.62 MEMKTRRGKRSEAFWPSIVMKKWLNIKPEAYDFSEDEIDTETESEDDACSVKDDERKQVDEDHSHRTKWKNESVSSTQIITDHPPSKSCPFRHRRGKSETIRAQYINKKDLRVTICSWNVAGRCPDEDLDLHDWLSTDEPADIYIIGFQEIVPLNAGNVLGAEDSRPIPKWESTIRKTLNKSLEPESKYKSYSAPPSPVQRTSSVVDVLVDQVASDCQLNAINEEYSGKNLDLKRIYGLDCESRLDWLEVPLDATPQIIDSNLKLRRVLSSSARIGFNGSEFPPAFPPKNQINVTTALKRSYHSSGNLGSIWMDQQEQREILESLSDNSDNFFEREEDDSFIELQNDHQQAHHGTVAKEGVKKKSRPRYVRIVSKQMIGIYVSIWVQRRLRRHVNNLKVSPVGVGLMGYIGNKGSVSVSMSLFQSRLCFVCSHLASGQKGGAEQRRNEDVNEIIRRTSFDSVFDGNQPQTIPSHDQIFWFGDLNYRLNLLDSEIRKLVTLKQWDELIKYDQLSRELNTGGVFEGWKEGVINFPPTYKYKINSDTYVSKNPKEGEKKRSPAWCDRILWLGKGIRQVSYERAEMRLSDHRPVTSIFSVEVEVLDQRKLQRALIVNSAAVHPEIFLHENGELDS 631
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 6091798 6095712 - Conep08aG0064000.1 Cone8ag0619 443168

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag0619 631 FunFam Type I inositol polyphosphate 5-phosphatase 2 299 620 - -
Cone8ag0619 631 SMART i5p_5 288 602 IPR000300 GO:0016791(InterPro)|GO:0046856(InterPro)
Cone8ag0619 631 Pfam Endonuclease/Exonuclease/phosphatase family 2 116 190 IPR000300 GO:0016791(InterPro)|GO:0046856(InterPro)
Cone8ag0619 631 Pfam Endonuclease/Exonuclease/phosphatase family 2 358 592 IPR000300 GO:0016791(InterPro)|GO:0046856(InterPro)
Cone8ag0619 631 MobiDBLite consensus disorder prediction 49 70 - -
Cone8ag0619 631 SUPERFAMILY DNase I-like 362 607 IPR036691 -
Cone8ag0619 631 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 18 618 IPR045849 GO:0004439(PANTHER)|GO:0004445(InterPro)|GO:0034485(PANTHER)|GO:0046856(PANTHER)
Cone8ag0619 631 SUPERFAMILY DNase I-like 103 194 IPR036691 -
Cone8ag0619 631 MobiDBLite consensus disorder prediction 35 75 - -
Cone8ag0619 631 Gene3D Endonuclease/exonuclease/phosphatase 312 619 IPR036691 -
Cone8ag0619 631 Gene3D Endonuclease/exonuclease/phosphatase 94 196 IPR036691 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag0619 K24221 - - cit:102607565 843.573
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag0768 Cone-Chr17:5819099 Cone8ag0619 Cone-Chr8:6091798 2.11E-149 dispersed
Cone20ag0358 Cone-Chr20:1607833 Cone8ag0619 Cone-Chr8:6091798 3.24E-144 dispersed
Cone4ag0256 Cone-Chr4:1143759 Cone8ag0619 Cone-Chr8:6091798 8.21E-116 dispersed
Cone5ag0968 Cone-Chr5:4143245 Cone8ag0619 Cone-Chr8:6091798 2.13E-30 dispersed
Cone7ag0268 Cone-Chr7:1103150 Cone8ag0619 Cone-Chr8:6091798 6.01E-112 dispersed
Cone12ag0604 Cone-Chr12:5361468 Cone8ag0619 Cone-Chr8:6091798 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g605 . Blo03g00111 Bda06g01281 . . Bpe07g00226 . . . . . . . . . . . . . . . . . . . . . . . . . Cone8ag0619 Cone12ag0604 . . . . . . . . Bda07g00843 . . . . Bma12g00225 . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004106 1 6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 6 3 1 43