Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone8ag0629 | ATGAGGACGGTGAGATTGGGAGGAGATCGAAAATCGAGCCTGAGTAGTGGAAGTGCTTCTTCTCGACCGATTCAACTCGGCCGAGTTCAGCCGCAAGCACCTGGTCACCGTACTATCTACTGTAATGATCGGGAGGCTAATCTGCCAGTAAAGTTTAAGGGAAATTCGGTTTCGACGACCAAGTACAACTTCCTTACCTTTTTACCAAAAGGGCTATTTGAACAGTTTAGGCGGGTAGCTAATCTATACTTTCTTACGATCTCCATTTTATCTGCAACACCGATCAGTCCTGTTCATCCAATAACAAATGTTATCCCTCTGAGTATAGTTCTACTTGTTTCTCTTATAAAAGAAGCCTTTGAGGACTGGAAGCGTTTTCAGAATGATATGGCAATAAATAATAACTATGTTGAAGTGTTGCAAGATCAAAAGTGGGGGACTATTCCCTGGAAAAAGTTGCAGGTTGGAGACATTGTCAAGGTCAAGCAGGATGGATATTTTCCTGCGGATCTGCTTTTCCTTGCTAGTACAAATTCAGATGGTGTCTGCTATATTGAGACTGCGAACTTGGATGGGGAAACCAATTTGAAGATCAGAAAGGCATTGGAAAAGACCTGGGATTACTTGATTCCTGATAAAGCATCTGAATTCAAAGGTGAAGTGCAATGTGAGCAACCAAACAACTCATTATACACTTTCACTGGAAATCTTATCATACAGAAACAAACGTTACCTCTTAGCCCAAACCAGCTTCTACTGCGAGGATGTAGCCTTAGGAACACTGAGTACATTGTTGGAGCTGTCATTTTTACTGGTCATGAAACGAAGGTTATGATGAACACCATGAACGTTCCTTCCAAAAGAAGTACCCTGGAGAGGAAACTTGACAAACTTATACTGGTGCTGTTTGGTACTCTATTTGTTATGTGTCTGATTGGAGCCATTGGCAGTGGTGTGTTCATAAACAGCAAGTACTACTACTTAGCTCTTGATAGAGGCCAAGAAGATCAGTTCAACCCTAATAACCGCATCCTGGTCGTCACTCTGACAATGTTTACCCTAATCACTTTGTACTCCACAATTATTCCCATCTCACTATATGTTTCCATTGAGATGATCAAATTTATCCAGTCAACTCAGTTTATCAATAAAGACTTAAATATGTTCCATGTTGAGAGCAACACTCCTGCCTTGGCTAGGACTTCTAATCTGAATGAGGAACTTGGTCAGGTTGAATACATCTTTTCTGACAAAACTGGAACCCTGACCAGAAACTTAATGGAGTTCTTTAAGTGTTCAATTGGAGGAGAGATTTATGGCACTGGCATCACGGAAATAGAGAGGGAACTTCACCTGCGGAATGGGATGAAAGTTGACGAGGTGCAAAAGTCAGCTGGTGCAGTCCAAGAGAAAGGCTTTAATTTTGATGATTCTAGGCTTACTCGAGGAGCATGGAGGAATGAGCCTCATTCAGATCTATGCAGGGAATTTTTCAGATGCCTTGCCATATGCCACACTGTACTCCCTGAAGGTGATGAATCGCCTGAAAAGATAACATATCAAGCCGCATCACCAGATGAGGCTGCTTTGGTAACTGCTGCAAAAAATTTTGGTTTCTTCTTTTACAGGCGTACACCTACCACGATTCATGTTAGTGAATCTCATGTTGAGAAGATGGGTAAAACCCAAGATTTGTCTTACGAGATTCTAAATGTCCTTGAGTTTAATAGTACGAGGAAACGTCAGTCTGTGGTATGTCGTTATCCAGATGGCAGGCTTGTTTTGTACTGCAAGGGTGCTGATAATGTAATCTATGAGCGATTGGCTGATGGAAGTAATGAATTAAAGAAAGCAACTAGGGCACACTTGGAGCAATTTGGGTCTTCTGGATTACGAACCTTGTGCCTGGCTTATAGGGATTTGAGTTCTGATATGTATGAAAGCTGGAACGAGAAATTCATTCAGGCTAAATCTTCTTTGCGAGACCGTGAAAAGAAGTTGGATGAGATTGCTGAACTCATAGAAAAAGATCTTATTTTGATTGGTTGCACTGCCATAGAAGACAAACTTCAAGAAGGAGTACCAAATTGTATAGAGACACTTTCTAGAGCTGGTATCAAGATCTGGGTGCTTACAGGGGACAAAATGGAAACGGCAATAAATATAGCTTATGCATGCAATTTAATTAACAATGAAATGAAACAATTCATTATCAGTTCGGAAACTGATGCTATCTGGGAAGTTGAAAATAGGGGTGACCAAGTAGAAATTGCTCGCTTTACAAGAGAAGAAGTCAAAAAAGGGCTGAAGAGGTGTCTTGAGGAAGCACAAGGATACTTGCGCTCTCCATCTGGACCAAAATTAGCACTTGTAATAGATGGAAAGTGTTTGATGTACGCATTAGACCCAAACTTGCGAGTGATGCTACTTAATCTGAGCTTGAATTGCAGCTCAGTTGTTTGTTGCCGAGTTTCTCCTCTTCAGAAAGCACAGGTGACAAGTTTGGTCAGAAAAGGTGCACGGAAAATAACACTTAGCATTGGTGATGGTGCCAATGATGTCAGCATGATTCAAGCAGCTCATGTCGGTGTTGGAATTAGTGGCCAGGAAGGGATGCAGGCAGTGATGGCTAGTGATTTTGCAATTGCCCAATTTCGGTTTCTCACTGATCTACTTCTTGTTCATGGGCGATGGTCATATCTGAGAATAAGCAAGGTTGTGATGTATTTCTTTTACAAGAATCTTACGTTCACTTTGACTCAATTTTGGTTCACCTTCCATACTGGATTTTCTGGTCAAAGATTCTATGATGATTGGTTCCAATCATTATACAATGTCATATTTACTGCTCTTCCCGTGATCATTTTTGGGCTTTTTGACAAGGATGTCAGTTCTTCACTTTCCAAGAAATACCCTGAGCTCTACATGGAAGGAATAAGAAATACATTTTTCAAGTGGAGAGTTGTACTGATTTGGGCTTTCTTTTCTATTTACCAATCTCTAGTCTTCTATTGTTTTGTGACTGCTTCTAGTAAAAGCAGTCAAAATTCTTCTGGAAAGTTATTCGGCCTTTGGGATGTCAGCACAATGGCCTTCACTTGTATTGTGGTTGCTGTCAACTTACGTCTACTTATGCTTTGCAATTCAATCACTAAGTGGCATTATATAGGTGTTGGGGGAAGCATTTTAGCATGGTTCTTATTCATTTTCATGTATTCTGGTATAATGACTCCACAAGATAGGCAGGAAAATGTATATTCTGTCATTTTTGTCCTAATGAGTACATTCTACTTCTACCTCACCGTTCTTCTTGTTCCTATAGTTGCACTACTTTGCGACTTTGTTTACCAAGGGATTCAAAGATGGTTTTGCCCGTATGATTATCAGATAGTTCAAGAAATTCACAGACACGAGCCTGAAGGTAGAAGCATGGCGGGATTGCTCGAGATCAATAACCACCTTACCCCGGACGAGGCAAGGAGCTATGCTATGTCTCAGCTCCCACGAGAGTTATCAAAGCACACCGGGTTTGCATTTGACTCACCTGGATACGAGTCCTTCTTTGCCTCACAGCTTGGTGTTTATGCCCCTCAAAAGGCATGGGATGTGGCTCGCAGAGCCAGCATGAAGCCACGCACCACGAAACTAGGTCAACAGAATTAA | 3663 | 41.33 | MRTVRLGGDRKSSLSSGSASSRPIQLGRVQPQAPGHRTIYCNDREANLPVKFKGNSVSTTKYNFLTFLPKGLFEQFRRVANLYFLTISILSATPISPVHPITNVIPLSIVLLVSLIKEAFEDWKRFQNDMAINNNYVEVLQDQKWGTIPWKKLQVGDIVKVKQDGYFPADLLFLASTNSDGVCYIETANLDGETNLKIRKALEKTWDYLIPDKASEFKGEVQCEQPNNSLYTFTGNLIIQKQTLPLSPNQLLLRGCSLRNTEYIVGAVIFTGHETKVMMNTMNVPSKRSTLERKLDKLILVLFGTLFVMCLIGAIGSGVFINSKYYYLALDRGQEDQFNPNNRILVVTLTMFTLITLYSTIIPISLYVSIEMIKFIQSTQFINKDLNMFHVESNTPALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERELHLRNGMKVDEVQKSAGAVQEKGFNFDDSRLTRGAWRNEPHSDLCREFFRCLAICHTVLPEGDESPEKITYQAASPDEAALVTAAKNFGFFFYRRTPTTIHVSESHVEKMGKTQDLSYEILNVLEFNSTRKRQSVVCRYPDGRLVLYCKGADNVIYERLADGSNELKKATRAHLEQFGSSGLRTLCLAYRDLSSDMYESWNEKFIQAKSSLRDREKKLDEIAELIEKDLILIGCTAIEDKLQEGVPNCIETLSRAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIISSETDAIWEVENRGDQVEIARFTREEVKKGLKRCLEEAQGYLRSPSGPKLALVIDGKCLMYALDPNLRVMLLNLSLNCSSVVCCRVSPLQKAQVTSLVRKGARKITLSIGDGANDVSMIQAAHVGVGISGQEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRISKVVMYFFYKNLTFTLTQFWFTFHTGFSGQRFYDDWFQSLYNVIFTALPVIIFGLFDKDVSSSLSKKYPELYMEGIRNTFFKWRVVLIWAFFSIYQSLVFYCFVTASSKSSQNSSGKLFGLWDVSTMAFTCIVVAVNLRLLMLCNSITKWHYIGVGGSILAWFLFIFMYSGIMTPQDRQENVYSVIFVLMSTFYFYLTVLLVPIVALLCDFVYQGIQRWFCPYDYQIVQEIHRHEPEGRSMAGLLEINNHLTPDEARSYAMSQLPRELSKHTGFAFDSPGYESFFASQLGVYAPQKAWDVARRASMKPRTTKLGQQN | 1220 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 6217396 | 6227955 | + | Conep08aG0065000.1 | Cone8ag0629 | 443178 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone8ag0629 | 1220 | FunFam | Phospholipid-transporting ATPase | 680 | 887 | - | - | |
Cone8ag0629 | 1220 | SUPERFAMILY | HAD-like | 410 | 902 | IPR036412 | - | |
Cone8ag0629 | 1220 | NCBIfam | HAD-IC family P-type ATPase | 820 | 927 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
Cone8ag0629 | 1220 | Gene3D | - | 680 | 887 | IPR023214 | - | |
Cone8ag0629 | 1220 | MobiDBLite | consensus disorder prediction | 1 | 34 | - | - | |
Cone8ag0629 | 1220 | NCBIfam | phospholipid-translocating P-type ATPase | 52 | 1133 | IPR006539 | GO:0000287(InterPro)|GO:0005524(InterPro)|GO:0015914(InterPro)|GO:0016020(InterPro)|GO:0140326(InterPro) | |
Cone8ag0629 | 1220 | PANTHER | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE | 27 | 1137 | - | GO:0005802(PANTHER)|GO:0005886(PANTHER)|GO:0045332(PANTHER)|GO:0048194(PANTHER)|GO:0140326(PANTHER) | |
Cone8ag0629 | 1220 | MobiDBLite | consensus disorder prediction | 9 | 27 | - | - | |
Cone8ag0629 | 1220 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 421 | 694 | IPR023299 | GO:0000166(InterPro) | |
Cone8ag0629 | 1220 | Gene3D | - | 117 | 282 | - | - | |
Cone8ag0629 | 1220 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 417 | 423 | IPR018303 | - | |
Cone8ag0629 | 1220 | FunFam | Phospholipid-transporting ATPase | 113 | 282 | - | - | |
Cone8ag0629 | 1220 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 51 | 1124 | IPR023298 | - | |
Cone8ag0629 | 1220 | Pfam | Phospholipid-translocating P-type ATPase C-terminal | 875 | 1125 | IPR032630 | - | |
Cone8ag0629 | 1220 | Pfam | Phospholipid-translocating ATPase N-terminal | 39 | 103 | IPR032631 | - | |
Cone8ag0629 | 1220 | FunFam | Phospholipid-transporting ATPase IC | 412 | 424 | - | - | |
Cone8ag0629 | 1220 | SFLD | Haloacid Dehalogenase | 397 | 898 | - | - | |
Cone8ag0629 | 1220 | CDD | P-type_ATPase_APLT_Dnf-like | 54 | 1008 | - | - | |
Cone8ag0629 | 1220 | Pfam | Cation transport ATPase (P-type) | 511 | 608 | - | - | |
Cone8ag0629 | 1220 | PRINTS | P-type cation-transporting ATPase superfamily signature | 415 | 429 | - | - | |
Cone8ag0629 | 1220 | PRINTS | P-type cation-transporting ATPase superfamily signature | 847 | 866 | - | - | |
Cone8ag0629 | 1220 | Pfam | E1-E2 ATPase | 134 | 315 | - | - | |
Cone8ag0629 | 1220 | SUPERFAMILY | Calcium ATPase, transduction domain A | 134 | 278 | IPR008250 | - | |
Cone8ag0629 | 1220 | SFLD | p-type atpase | 397 | 898 | IPR044492 | - | |
Cone8ag0629 | 1220 | FunFam | Phospholipid-transporting ATPase | 524 | 679 | - | - | |
Cone8ag0629 | 1220 | Gene3D | - | 526 | 679 | IPR023299 | GO:0000166(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone3ag0482 | Cone-Chr3:2347796 | Cone8ag0629 | Cone-Chr8:6217396 | 4.04E-216 | dispersed | |
Cone7ag1229 | Cone-Chr7:9118286 | Cone8ag0629 | Cone-Chr8:6217396 | 0 | dispersed | |
Cone8ag0629 | Cone-Chr8:6217396 | Cone8ag1520 | Cone-Chr8:11463080 | 1.65E-155 | dispersed | |
Cone12ag0612 | Cone-Chr12:5434262 | Cone8ag0629 | Cone-Chr8:6217396 | 0 | wgd | |
Cone13ag0997 | Cone-Chr13:8392632 | Cone8ag0629 | Cone-Chr8:6217396 | 0 | wgd | |
Cone19ag0988 | Cone-Chr19:7442544 | Cone8ag0629 | Cone-Chr8:6217396 | 1.89E-21 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone8ag0629 | K14802 | - | csv:101207069 | 2102.41 |