Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag0629 ATGAGGACGGTGAGATTGGGAGGAGATCGAAAATCGAGCCTGAGTAGTGGAAGTGCTTCTTCTCGACCGATTCAACTCGGCCGAGTTCAGCCGCAAGCACCTGGTCACCGTACTATCTACTGTAATGATCGGGAGGCTAATCTGCCAGTAAAGTTTAAGGGAAATTCGGTTTCGACGACCAAGTACAACTTCCTTACCTTTTTACCAAAAGGGCTATTTGAACAGTTTAGGCGGGTAGCTAATCTATACTTTCTTACGATCTCCATTTTATCTGCAACACCGATCAGTCCTGTTCATCCAATAACAAATGTTATCCCTCTGAGTATAGTTCTACTTGTTTCTCTTATAAAAGAAGCCTTTGAGGACTGGAAGCGTTTTCAGAATGATATGGCAATAAATAATAACTATGTTGAAGTGTTGCAAGATCAAAAGTGGGGGACTATTCCCTGGAAAAAGTTGCAGGTTGGAGACATTGTCAAGGTCAAGCAGGATGGATATTTTCCTGCGGATCTGCTTTTCCTTGCTAGTACAAATTCAGATGGTGTCTGCTATATTGAGACTGCGAACTTGGATGGGGAAACCAATTTGAAGATCAGAAAGGCATTGGAAAAGACCTGGGATTACTTGATTCCTGATAAAGCATCTGAATTCAAAGGTGAAGTGCAATGTGAGCAACCAAACAACTCATTATACACTTTCACTGGAAATCTTATCATACAGAAACAAACGTTACCTCTTAGCCCAAACCAGCTTCTACTGCGAGGATGTAGCCTTAGGAACACTGAGTACATTGTTGGAGCTGTCATTTTTACTGGTCATGAAACGAAGGTTATGATGAACACCATGAACGTTCCTTCCAAAAGAAGTACCCTGGAGAGGAAACTTGACAAACTTATACTGGTGCTGTTTGGTACTCTATTTGTTATGTGTCTGATTGGAGCCATTGGCAGTGGTGTGTTCATAAACAGCAAGTACTACTACTTAGCTCTTGATAGAGGCCAAGAAGATCAGTTCAACCCTAATAACCGCATCCTGGTCGTCACTCTGACAATGTTTACCCTAATCACTTTGTACTCCACAATTATTCCCATCTCACTATATGTTTCCATTGAGATGATCAAATTTATCCAGTCAACTCAGTTTATCAATAAAGACTTAAATATGTTCCATGTTGAGAGCAACACTCCTGCCTTGGCTAGGACTTCTAATCTGAATGAGGAACTTGGTCAGGTTGAATACATCTTTTCTGACAAAACTGGAACCCTGACCAGAAACTTAATGGAGTTCTTTAAGTGTTCAATTGGAGGAGAGATTTATGGCACTGGCATCACGGAAATAGAGAGGGAACTTCACCTGCGGAATGGGATGAAAGTTGACGAGGTGCAAAAGTCAGCTGGTGCAGTCCAAGAGAAAGGCTTTAATTTTGATGATTCTAGGCTTACTCGAGGAGCATGGAGGAATGAGCCTCATTCAGATCTATGCAGGGAATTTTTCAGATGCCTTGCCATATGCCACACTGTACTCCCTGAAGGTGATGAATCGCCTGAAAAGATAACATATCAAGCCGCATCACCAGATGAGGCTGCTTTGGTAACTGCTGCAAAAAATTTTGGTTTCTTCTTTTACAGGCGTACACCTACCACGATTCATGTTAGTGAATCTCATGTTGAGAAGATGGGTAAAACCCAAGATTTGTCTTACGAGATTCTAAATGTCCTTGAGTTTAATAGTACGAGGAAACGTCAGTCTGTGGTATGTCGTTATCCAGATGGCAGGCTTGTTTTGTACTGCAAGGGTGCTGATAATGTAATCTATGAGCGATTGGCTGATGGAAGTAATGAATTAAAGAAAGCAACTAGGGCACACTTGGAGCAATTTGGGTCTTCTGGATTACGAACCTTGTGCCTGGCTTATAGGGATTTGAGTTCTGATATGTATGAAAGCTGGAACGAGAAATTCATTCAGGCTAAATCTTCTTTGCGAGACCGTGAAAAGAAGTTGGATGAGATTGCTGAACTCATAGAAAAAGATCTTATTTTGATTGGTTGCACTGCCATAGAAGACAAACTTCAAGAAGGAGTACCAAATTGTATAGAGACACTTTCTAGAGCTGGTATCAAGATCTGGGTGCTTACAGGGGACAAAATGGAAACGGCAATAAATATAGCTTATGCATGCAATTTAATTAACAATGAAATGAAACAATTCATTATCAGTTCGGAAACTGATGCTATCTGGGAAGTTGAAAATAGGGGTGACCAAGTAGAAATTGCTCGCTTTACAAGAGAAGAAGTCAAAAAAGGGCTGAAGAGGTGTCTTGAGGAAGCACAAGGATACTTGCGCTCTCCATCTGGACCAAAATTAGCACTTGTAATAGATGGAAAGTGTTTGATGTACGCATTAGACCCAAACTTGCGAGTGATGCTACTTAATCTGAGCTTGAATTGCAGCTCAGTTGTTTGTTGCCGAGTTTCTCCTCTTCAGAAAGCACAGGTGACAAGTTTGGTCAGAAAAGGTGCACGGAAAATAACACTTAGCATTGGTGATGGTGCCAATGATGTCAGCATGATTCAAGCAGCTCATGTCGGTGTTGGAATTAGTGGCCAGGAAGGGATGCAGGCAGTGATGGCTAGTGATTTTGCAATTGCCCAATTTCGGTTTCTCACTGATCTACTTCTTGTTCATGGGCGATGGTCATATCTGAGAATAAGCAAGGTTGTGATGTATTTCTTTTACAAGAATCTTACGTTCACTTTGACTCAATTTTGGTTCACCTTCCATACTGGATTTTCTGGTCAAAGATTCTATGATGATTGGTTCCAATCATTATACAATGTCATATTTACTGCTCTTCCCGTGATCATTTTTGGGCTTTTTGACAAGGATGTCAGTTCTTCACTTTCCAAGAAATACCCTGAGCTCTACATGGAAGGAATAAGAAATACATTTTTCAAGTGGAGAGTTGTACTGATTTGGGCTTTCTTTTCTATTTACCAATCTCTAGTCTTCTATTGTTTTGTGACTGCTTCTAGTAAAAGCAGTCAAAATTCTTCTGGAAAGTTATTCGGCCTTTGGGATGTCAGCACAATGGCCTTCACTTGTATTGTGGTTGCTGTCAACTTACGTCTACTTATGCTTTGCAATTCAATCACTAAGTGGCATTATATAGGTGTTGGGGGAAGCATTTTAGCATGGTTCTTATTCATTTTCATGTATTCTGGTATAATGACTCCACAAGATAGGCAGGAAAATGTATATTCTGTCATTTTTGTCCTAATGAGTACATTCTACTTCTACCTCACCGTTCTTCTTGTTCCTATAGTTGCACTACTTTGCGACTTTGTTTACCAAGGGATTCAAAGATGGTTTTGCCCGTATGATTATCAGATAGTTCAAGAAATTCACAGACACGAGCCTGAAGGTAGAAGCATGGCGGGATTGCTCGAGATCAATAACCACCTTACCCCGGACGAGGCAAGGAGCTATGCTATGTCTCAGCTCCCACGAGAGTTATCAAAGCACACCGGGTTTGCATTTGACTCACCTGGATACGAGTCCTTCTTTGCCTCACAGCTTGGTGTTTATGCCCCTCAAAAGGCATGGGATGTGGCTCGCAGAGCCAGCATGAAGCCACGCACCACGAAACTAGGTCAACAGAATTAA 3663 41.33 MRTVRLGGDRKSSLSSGSASSRPIQLGRVQPQAPGHRTIYCNDREANLPVKFKGNSVSTTKYNFLTFLPKGLFEQFRRVANLYFLTISILSATPISPVHPITNVIPLSIVLLVSLIKEAFEDWKRFQNDMAINNNYVEVLQDQKWGTIPWKKLQVGDIVKVKQDGYFPADLLFLASTNSDGVCYIETANLDGETNLKIRKALEKTWDYLIPDKASEFKGEVQCEQPNNSLYTFTGNLIIQKQTLPLSPNQLLLRGCSLRNTEYIVGAVIFTGHETKVMMNTMNVPSKRSTLERKLDKLILVLFGTLFVMCLIGAIGSGVFINSKYYYLALDRGQEDQFNPNNRILVVTLTMFTLITLYSTIIPISLYVSIEMIKFIQSTQFINKDLNMFHVESNTPALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERELHLRNGMKVDEVQKSAGAVQEKGFNFDDSRLTRGAWRNEPHSDLCREFFRCLAICHTVLPEGDESPEKITYQAASPDEAALVTAAKNFGFFFYRRTPTTIHVSESHVEKMGKTQDLSYEILNVLEFNSTRKRQSVVCRYPDGRLVLYCKGADNVIYERLADGSNELKKATRAHLEQFGSSGLRTLCLAYRDLSSDMYESWNEKFIQAKSSLRDREKKLDEIAELIEKDLILIGCTAIEDKLQEGVPNCIETLSRAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIISSETDAIWEVENRGDQVEIARFTREEVKKGLKRCLEEAQGYLRSPSGPKLALVIDGKCLMYALDPNLRVMLLNLSLNCSSVVCCRVSPLQKAQVTSLVRKGARKITLSIGDGANDVSMIQAAHVGVGISGQEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRISKVVMYFFYKNLTFTLTQFWFTFHTGFSGQRFYDDWFQSLYNVIFTALPVIIFGLFDKDVSSSLSKKYPELYMEGIRNTFFKWRVVLIWAFFSIYQSLVFYCFVTASSKSSQNSSGKLFGLWDVSTMAFTCIVVAVNLRLLMLCNSITKWHYIGVGGSILAWFLFIFMYSGIMTPQDRQENVYSVIFVLMSTFYFYLTVLLVPIVALLCDFVYQGIQRWFCPYDYQIVQEIHRHEPEGRSMAGLLEINNHLTPDEARSYAMSQLPRELSKHTGFAFDSPGYESFFASQLGVYAPQKAWDVARRASMKPRTTKLGQQN 1220
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 6217396 6227955 + Conep08aG0065000.1 Cone8ag0629 443178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag0629 1220 FunFam Phospholipid-transporting ATPase 680 887 - -
Cone8ag0629 1220 SUPERFAMILY HAD-like 410 902 IPR036412 -
Cone8ag0629 1220 NCBIfam HAD-IC family P-type ATPase 820 927 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cone8ag0629 1220 Gene3D - 680 887 IPR023214 -
Cone8ag0629 1220 MobiDBLite consensus disorder prediction 1 34 - -
Cone8ag0629 1220 NCBIfam phospholipid-translocating P-type ATPase 52 1133 IPR006539 GO:0000287(InterPro)|GO:0005524(InterPro)|GO:0015914(InterPro)|GO:0016020(InterPro)|GO:0140326(InterPro)
Cone8ag0629 1220 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 27 1137 - GO:0005802(PANTHER)|GO:0005886(PANTHER)|GO:0045332(PANTHER)|GO:0048194(PANTHER)|GO:0140326(PANTHER)
Cone8ag0629 1220 MobiDBLite consensus disorder prediction 9 27 - -
Cone8ag0629 1220 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 421 694 IPR023299 GO:0000166(InterPro)
Cone8ag0629 1220 Gene3D - 117 282 - -
Cone8ag0629 1220 ProSitePatterns E1-E2 ATPases phosphorylation site. 417 423 IPR018303 -
Cone8ag0629 1220 FunFam Phospholipid-transporting ATPase 113 282 - -
Cone8ag0629 1220 SUPERFAMILY Calcium ATPase, transmembrane domain M 51 1124 IPR023298 -
Cone8ag0629 1220 Pfam Phospholipid-translocating P-type ATPase C-terminal 875 1125 IPR032630 -
Cone8ag0629 1220 Pfam Phospholipid-translocating ATPase N-terminal 39 103 IPR032631 -
Cone8ag0629 1220 FunFam Phospholipid-transporting ATPase IC 412 424 - -
Cone8ag0629 1220 SFLD Haloacid Dehalogenase 397 898 - -
Cone8ag0629 1220 CDD P-type_ATPase_APLT_Dnf-like 54 1008 - -
Cone8ag0629 1220 Pfam Cation transport ATPase (P-type) 511 608 - -
Cone8ag0629 1220 PRINTS P-type cation-transporting ATPase superfamily signature 415 429 - -
Cone8ag0629 1220 PRINTS P-type cation-transporting ATPase superfamily signature 847 866 - -
Cone8ag0629 1220 Pfam E1-E2 ATPase 134 315 - -
Cone8ag0629 1220 SUPERFAMILY Calcium ATPase, transduction domain A 134 278 IPR008250 -
Cone8ag0629 1220 SFLD p-type atpase 397 898 IPR044492 -
Cone8ag0629 1220 FunFam Phospholipid-transporting ATPase 524 679 - -
Cone8ag0629 1220 Gene3D - 526 679 IPR023299 GO:0000166(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone3ag0482 Cone-Chr3:2347796 Cone8ag0629 Cone-Chr8:6217396 4.04E-216 dispersed
Cone7ag1229 Cone-Chr7:9118286 Cone8ag0629 Cone-Chr8:6217396 0 dispersed
Cone8ag0629 Cone-Chr8:6217396 Cone8ag1520 Cone-Chr8:11463080 1.65E-155 dispersed
Cone12ag0612 Cone-Chr12:5434262 Cone8ag0629 Cone-Chr8:6217396 0 wgd
Cone13ag0997 Cone-Chr13:8392632 Cone8ag0629 Cone-Chr8:6217396 0 wgd
Cone19ag0988 Cone-Chr19:7442544 Cone8ag0629 Cone-Chr8:6217396 1.89E-21 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag0629 K14802 - csv:101207069 2102.41