Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag0638 ATGGTGATTGAAAATGGAATTAGTGAGAGAAAATCCGAGCTTGTACAAGAAATCCCTCTTCTCCGCGGGAGATCTTCAACTTCCCATGTCAAAACCGTCCCAGAAACTGAAAACCCAAGTCAAATCACTCATCCACCAACACCTCCGCCGCCACCTCCGCCTCCTACGGCGGCCGCACCAACTCAAGTACCTCCTTCACAACCCTTTTTAGCGCTTGGTAACAATAGCAAACGCCCGGATCCACCTCCACTACCTCCACCTGCAAACCTAGAGAAGATAAATAATCCGACACCACCACCTCCTCCGACAGTAATGGCAGGGGGGTTGAAGTTGCCAGCGAAGGTTCCACCGGTTCCGAAACTTCCAGCCCCGGTTGGTAAAACGGGAGAGTCCTCTTCATCTGGTAAAGAAAAGAATGGTCAAGTAAAGATGAAGCCACTGCATTGGGATAAAGTGAATACTACTAATGCTGAGCACTCCATGGTATGGGAAAAAATGGATGGTGGCTCTTTCAGGTTTGACGGTGACCTTATGGAAGCTCTCTTCGGATATGTCGCTACAAATCGATCCCCTCAGAGACCTGAAAACTCAAAGAATCCAGCCAGTTTTGATTCATCTTCAAATTCACAAACATTTATATTAGATTCTAGAAAGTCTCAAAACATTGCAATCGTCATAAAATCACTTACCATTTCCAAAAACGAACTCATGGAAGCACTAGTGTCAGGACAGGGTCTAGAGACCGACACTCTCGAAAAGCTCGACAGAATCGCGCCAACTCAAGAAGAACAATCTGAAATCCTCAAATTTAATGGAGACCCATCAAAACTAGCCAATGCAGAATCCTTCCTCTTCAACGTTCTAAAGGCCGTTCCAACAGCTTTCACCCGTCTCAAAGCCATGCTTTTCCGATTGAATTATGACCCGGAAATTCTTCTCCTCAAGGAAGATCTACAAACCCTAGAACTTGGGTGCAGAGAGCTTAAAACCCGAACGCTCCTTACAAAACTCCTAGAAGCCATACTTAAAGCTGGAAATCGCATGAATGCCGGGACTTCAAGAGGAAATGCTCAAGCTTTCAATCTCACTGCTCTCCGGAAGCTATCGGATGTTAGAAGTACGGATGGGAAAACGAGTCTGCTTCACTTTGTTGTTGAAGAAGTGGTCCGATCTGAAGGGAAAAAGTGTGCTTTAAACCGAAAGAATAACTCGAGCAATAACAACAGCAGCTTATTAATTAGCGAGACTTTGAATTCAAAAGAAGAAAGGCTGAGGGAGTATATGAAGTTAGGGCTGCCAATTGTAGGAGGATTGAGCATGGAATTTTCTAACGTAAAGAAATCTGCCTCAATCGATTATAATTCCTTTGTTGGGATATGTCCGGCTCTAGCTTCTAGAATTTCGGAAATTCGAAAACTAGTGGCACGTTGTGTGGATGATGGAGGACGGTTTGCAAGGGAAATGATGGGTTTTCTTGAAGTAGCTGAAAATGAAGTAAAAGTGATGAAAGATGAGCAAATTAGGGTTTTGGAGGCTGTGAAGAAAACAACAGAATACTATCAAGGGGGTGCTTCCATTGATAAAGAAGGGGGGAACTTGCTTCAATTATTTGTTATAGTGAAAGATTTTCTAGGTATGGTTGATCGGGCTTGTGTGGAAATTTCTCGAAATGCTCAAAGGAGGAGCAGATCAACAGCTAGGAGTTGGGATTCATCTTCATCTCCAAGATTGGAACCCTTCAAACAGGTTCTGTCTCGGTTTCCAAATTTGCCGGAAAATTTCATGTCAGAAAAGTCGAGGAGCAGTTCTAGTGAGTCAGATGGTGAGATTTGA 1833 43.86 MVIENGISERKSELVQEIPLLRGRSSTSHVKTVPETENPSQITHPPTPPPPPPPPTAAAPTQVPPSQPFLALGNNSKRPDPPPLPPPANLEKINNPTPPPPPTVMAGGLKLPAKVPPVPKLPAPVGKTGESSSSGKEKNGQVKMKPLHWDKVNTTNAEHSMVWEKMDGGSFRFDGDLMEALFGYVATNRSPQRPENSKNPASFDSSSNSQTFILDSRKSQNIAIVIKSLTISKNELMEALVSGQGLETDTLEKLDRIAPTQEEQSEILKFNGDPSKLANAESFLFNVLKAVPTAFTRLKAMLFRLNYDPEILLLKEDLQTLELGCRELKTRTLLTKLLEAILKAGNRMNAGTSRGNAQAFNLTALRKLSDVRSTDGKTSLLHFVVEEVVRSEGKKCALNRKNNSSNNNSSLLISETLNSKEERLREYMKLGLPIVGGLSMEFSNVKKSASIDYNSFVGICPALASRISEIRKLVARCVDDGGRFAREMMGFLEVAENEVKVMKDEQIRVLEAVKKTTEYYQGGASIDKEGGNLLQLFVIVKDFLGMVDRACVEISRNAQRRSRSTARSWDSSSSPRLEPFKQVLSRFPNLPENFMSEKSRSSSSESDGEI 610
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 6278951 6281420 - Conep08aG0065900.1 Cone8ag0638 443187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag0638 610 MobiDBLite consensus disorder prediction 562 610 - -
Cone8ag0638 610 MobiDBLite consensus disorder prediction 78 106 - -
Cone8ag0638 610 SUPERFAMILY Formin homology 2 domain (FH2 domain) 147 563 - -
Cone8ag0638 610 MobiDBLite consensus disorder prediction 189 208 - -
Cone8ag0638 610 Gene3D Formin, FH2 domain 153 574 IPR042201 -
Cone8ag0638 610 MobiDBLite consensus disorder prediction 188 208 - -
Cone8ag0638 610 ProSiteProfiles Formin homology-2 (FH2) domain profile. 134 573 IPR015425 -
Cone8ag0638 610 SMART it6_source 134 562 IPR015425 -
Cone8ag0638 610 MobiDBLite consensus disorder prediction 41 62 - -
Cone8ag0638 610 MobiDBLite consensus disorder prediction 21 40 - -
Cone8ag0638 610 Pfam Formin Homology 2 Domain 136 547 IPR015425 -
Cone8ag0638 610 PANTHER FORMIN-RELATED 32 602 IPR027643 GO:0003779(InterPro)|GO:0030036(InterPro)|GO:0045010(InterPro)|GO:0051015(InterPro)
Cone8ag0638 610 MobiDBLite consensus disorder prediction 1 141 - -
Cone8ag0638 610 MobiDBLite consensus disorder prediction 562 579 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone8ag0638 Cone-Chr8:6278951 Cone9ag0106 Cone-Chr9:462691 5.68E-85 dispersed
Cone12ag0620 Cone-Chr12:5572509 Cone8ag0638 Cone-Chr8:6278951 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag0638 K28090 - mdm:103452352 585.874