Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag0639 ATGGCGAGGAACGGTGGCGGCTCGTGGTGGCAGATGGCGGAGGAGGTTGAGGATTTCGTGGAACACTTACCACCCCCGCTGCTGCCGTCTGATTCTGAACAAGTTCATGTTCTTGCAGTTGATGATAGTTTCGTCGATCGAAAGGTCATCGAGCGCTTACTCAAGATTTCTTCTTGTAAAGTTACCGCCGTAGATAGTGGAAGAAGAGCTTTGCAATACCTTGGCTTGGACGGAGATCAGAGAAGCTCCTCTGTTCGATTTGATAAAATGAAGGTCGATATGATAATAACCGATTACTGTATGCCTGGAATGACAGGCTACGAATTGCTCAAGAAAATCAAGGAATCATCGACTTTCAGAGAAATTCCAGTTGTGATTATGTCATCAGAAAACGTATTAGCACGAATAAACAGGTGCTTAGAAGATGGAGCAGAGGATTTCATAGTGAAGCCAGTGCAGTTATCAGATGTGAGAAGGCTCACGGATTATATGATGAGGGAGATTAAAGTTGGAGATGAGGAGGAACGGAAGATAACGAAGAGAAAGTTAAGGGAAGATTCAAGTTGCGATCCGGCTTCATCATCACCGTCCGTTTCTTCGTCAAGATCATCATCGCCCACCCAACCATCTTCTTACCCATCACCTCTCTCATCATCATCCCCATCACCTTCTCCAAATCCGCCATCTTCACCCACGTCATTAGATACCCCAATCAGACGGCTCAAAATGACCACTATTGATTAG 744 45.43 MARNGGGSWWQMAEEVEDFVEHLPPPLLPSDSEQVHVLAVDDSFVDRKVIERLLKISSCKVTAVDSGRRALQYLGLDGDQRSSSVRFDKMKVDMIITDYCMPGMTGYELLKKIKESSTFREIPVVIMSSENVLARINRCLEDGAEDFIVKPVQLSDVRRLTDYMMREIKVGDEEERKITKRKLREDSSCDPASSSPSVSSSRSSSPTQPSSYPSPLSSSSPSPSPNPPSSPTSLDTPIRRLKMTTID 247
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 6286505 6287798 - Conep08aG0066000.1 Cone8ag0639 443188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag0639 247 MobiDBLite consensus disorder prediction 216 232 - -
Cone8ag0639 247 CDD REC_typeA_ARR 37 160 - -
Cone8ag0639 247 ProSiteProfiles Response regulatory domain profile. 36 165 IPR001789 GO:0000160(InterPro)
Cone8ag0639 247 SMART REC_2 35 161 IPR001789 GO:0000160(InterPro)
Cone8ag0639 247 Gene3D - 35 202 - -
Cone8ag0639 247 Pfam Response regulator receiver domain 37 158 IPR001789 GO:0000160(InterPro)
Cone8ag0639 247 MobiDBLite consensus disorder prediction 179 247 - -
Cone8ag0639 247 PANTHER TWO-COMPONENT RESPONSE REGULATOR 32 227 IPR045279 GO:0009736(InterPro)
Cone8ag0639 247 SUPERFAMILY CheY-like 34 172 IPR011006 -
Cone8ag0639 247 MobiDBLite consensus disorder prediction 189 215 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone19ag0116 Cone-Chr19:655317 Cone8ag0639 Cone-Chr8:6286505 7.41E-66 dispersed
Cone1ag1614 Cone-Chr1:57624446 Cone8ag0639 Cone-Chr8:6286505 2.59E-28 dispersed
Cone5ag0136 Cone-Chr5:592751 Cone8ag0639 Cone-Chr8:6286505 3.49E-54 dispersed
Cone7ag0062 Cone-Chr7:273575 Cone8ag0639 Cone-Chr8:6286505 5.41E-49 dispersed
Cone12ag0621 Cone-Chr12:5585406 Cone8ag0639 Cone-Chr8:6286505 4.33E-127 wgd
Cone13ag0113 Cone-Chr13:685989 Cone8ag0639 Cone-Chr8:6286505 1.27E-63 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
46668 PF10604 Polyketide_cyc2 1.80E-07 CL0209 Cone TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag0639 K14492 - mdm:103402970 261.151