Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag0647 ATGGAGCTCCCACGATTTAAAGAAGCCGAGGGAGAACGTGAGTTCCGGGTAGAAGTTGATATATTGAGCAGACTTGATCACCCAAATCTAGTGTCTTTAATAGGCTATTGTGCCGATGGCAAACATCGTTTTCTAGTATATGAATATATGCAGAATGGCAACCTCCAAGATCACTTAAATGGAATTGGGGAAACAAAAATGGATTGGCCGTCAAGACTGAAAGTGGCACTGGGAGCAGCAAAGGGACTTGCCTACCTCCATTCAAGTTCTGCAGTTGGAATCCCAATTGTTCATAGAGATTTTAAGTCCACAAACATTCTTCTAAACTCTAACTTTGATGCAAAGATTTCAGACTTTGGGCTAGCAAAGTTCATGCCGGAGGGTCAGGAAACATATGTGACAGCCAGAGTTCTTGGTACATTTGGCTACTTTGATCCTGAGTATACATCGACAGGAAAACTCACTTTGCAAAGTGATGCGTATGCATTTGGAGTTGTTCTTCTTGAACTTCTGACAGGACGACGAGCAGTGGACTTAAACCAAGGGCCAAATGATCAAAATCTAGTTTTACAGGTAAGACACATACTCAATGATCGGAAAAAGCTCCATAAAGTGATAGATCCAGAACTGAGTCGAAATTGGTACACCGTCGAATCCCTAATGATGTTTGCCAACCTTGCATCTCGCTGTGTCCGCGCAGAGAGTAGTGAGAGACCTACAATGGCTGAATGTGTAAAAGAACTCCAACAGATTATTTGTACAAATTCCAAACGCTTCGGAATGGATATGCATACCATTCGAATGGTCTAA 810 42.22 MELPRFKEAEGEREFRVEVDILSRLDHPNLVSLIGYCADGKHRFLVYEYMQNGNLQDHLNGIGETKMDWPSRLKVALGAAKGLAYLHSSSAVGIPIVHRDFKSTNILLNSNFDAKISDFGLAKFMPEGQETYVTARVLGTFGYFDPEYTSTGKLTLQSDAYAFGVVLLELLTGRRAVDLNQGPNDQNLVLQVRHILNDRKKLHKVIDPELSRNWYTVESLMMFANLASRCVRAESSERPTMAECVKELQQIICTNSKRFGMDMHTIRMV 269
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 6434382 6435723 - Conep08aG0067000.1 Cone8ag0647 443196

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag0647 269 FunFam receptor-like serine/threonine-protein kinase NCRK 50 260 - -
Cone8ag0647 269 Gene3D Phosphorylase Kinase; domain 1 4 50 - -
Cone8ag0647 269 Pfam Protein kinase domain 11 246 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone8ag0647 269 PANTHER OS01G0750732 PROTEIN 8 253 IPR050885 -
Cone8ag0647 269 ProSiteProfiles Protein kinase domain profile. 1 252 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone8ag0647 269 SUPERFAMILY Protein kinase-like (PK-like) 9 253 IPR011009 -
Cone8ag0647 269 ProSitePatterns Serine/Threonine protein kinases active-site signature. 96 108 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone8ag0647 269 Gene3D Transferase(Phosphotransferase) domain 1 51 265 - -
Cone8ag0647 269 PIRSF ILK 3 265 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag0647 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone8ag0647 Cone-Chr8:6434382 Cone14ag1133 Cone-Chr14:9414814 1.84E-78 dispersed
Cone8ag0647 Cone-Chr8:6434382 Cone7ag0170 Cone-Chr7:711534 2.57E-77 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g767 . Blo16g01150 . Bda11g01254 Bpe13g01451 . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone8ag0647 . . . . . . . . Bda11g01254 . . . Bma06g00630 . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83114 PF04640 PLATZ 4.20E-30 No_clan Cone PK