Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone8ag0655 | ATGGCGGCTCGGAGGATTTCCTCGCTCTTATCTCGATCATTTGCTTCTCCTTCTTCTTCTTCTTCTTTGTTTTCTAAAGGAAGGAGTCCTTATATGTTTACAGAAGTTGCTAAATATGGGACTGCTGCTGCTGTTGAAGATCCGATCAATCCATCTGTCAAAGTAAATTATACTCAGCTTTTGATTAATGGACAGTTTGTGGATGCAGTCTCAGGGAAAACTTTTCCAACACTTGACCCAAGGACTGGGGAAGTCATTGCTCACATGTCTGAGGGCGATGCTGAAGATATCAATAGAGCAGTTTCCTCCGCTCGAAAGGCATTTGATGAAGGACCATGGCCTAAGATGACTGCATATGAAAGATGCCGGATACTTTTGCGCTTTGCGGATTTGCTTGAAAAGCATAATGATGAGCTTGCAGCCCTTGAAACTTGGGATAATGGGAAACCATATGAGCAGGCTGCTAAAATAGAAGTACCGATGGTTGTTCGCTTTTTTCGATATTATGCCGGTTGGGCGGATAAGATTCATGGTTTAACTGTTCCGGCTGATGGACCGTATCATGTCCAAACCCTACACGAGCCGATAGGAGTTGCAGGTCAGATTATTCCATGGAACTTTCCTCTTCTCATGTTAGCTTGGAAGGTTGCACCAGCATTAGCATGTGGGAACACTGTTGTTCTGAAGACAGCTGAGCAGACACCATTGTCAGCTCTTTATGCAGCAAAATTACTTCATGAGGCCGGACTTCCTGATGGCGTCCTGAATATCGTTTCTGGTTTTGGACCAACTGCTGGTGCTTCCCTTTGCAGTCATATGGATGTTGATAAGCTTGCATTTACTGGATCCACCGCTACTGGTAAGATTGTCCTTGAATTGGCAGCAAGAAGCAATCTTAAACCGGTAACTTTGGAGCTTGGAGGAAAATCCCCTTTCATTGTATGTGAAGATGCTGATGTAGATAAGGCTGTTGAAATGGCACACCTTGCTCTATTTTTCAATCAGGGACAATGCTGCTGTGCTGGTTCCCGTACTTTTGTACACGAACGAGTATATGATCAGTTTGTGGAGAAAGCAAAGGAACGTGCATTAAAACGTGTCGTAGGAGATCCGTTTAAGGAGGGCATTGAACAGGGTCCTCAGATTGATTCGGAACAATTTGAGAAGATCCTAAAGTACATAAGATCAGGGGTTGAAAGTGGAGCCACTCTTGAAACTGGAGGAGAGAGGTTTGGCTCGAAGGGTTACTATATCAAGCCCACTGTTTTCTCCAACGTCCAAGACGACATGTTAATAGCAAAGGAGGAGATCTTTGGTCCCGTGCAAACCATTCTGAAATTCAAGAACCTTGAAGATGTAGTAAAAAGGGCAAATGCTACTCGGTACGGGCTTGCAGCTGGGATCTTCACTCAACATATTGATACTGCTAACTACCTTACCCGAGCATTACGGGCGGGAACGGTTTGGGTAAATTGCTTTGATGTGTTTGATGCTACGATTCCATTTGGTGGGTATAAGATGAGTGGGCACGGCAGAGAAAAGGGAATTTACGGCCTCAAGAATTACCTGCAAGTGAAAGCTGTTGTTACTCCTTTGAAAAACCCAGCTTGGCTTTAG | 1617 | 44.4 | MAARRISSLLSRSFASPSSSSSLFSKGRSPYMFTEVAKYGTAAAVEDPINPSVKVNYTQLLINGQFVDAVSGKTFPTLDPRTGEVIAHMSEGDAEDINRAVSSARKAFDEGPWPKMTAYERCRILLRFADLLEKHNDELAALETWDNGKPYEQAAKIEVPMVVRFFRYYAGWADKIHGLTVPADGPYHVQTLHEPIGVAGQIIPWNFPLLMLAWKVAPALACGNTVVLKTAEQTPLSALYAAKLLHEAGLPDGVLNIVSGFGPTAGASLCSHMDVDKLAFTGSTATGKIVLELAARSNLKPVTLELGGKSPFIVCEDADVDKAVEMAHLALFFNQGQCCCAGSRTFVHERVYDQFVEKAKERALKRVVGDPFKEGIEQGPQIDSEQFEKILKYIRSGVESGATLETGGERFGSKGYYIKPTVFSNVQDDMLIAKEEIFGPVQTILKFKNLEDVVKRANATRYGLAAGIFTQHIDTANYLTRALRAGTVWVNCFDVFDATIPFGGYKMSGHGREKGIYGLKNYLQVKAVVTPLKNPAWL | 538 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 6514282 | 6519573 | + | Conep08aG0067800.1 | Cone8ag0655 | 443204 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone8ag0655 | 538 | Pfam | Aldehyde dehydrogenase family | 67 | 528 | IPR015590 | GO:0016491(InterPro) | |
| Cone8ag0655 | 538 | SUPERFAMILY | ALDH-like | 54 | 532 | IPR016161 | GO:0016491(InterPro) | |
| Cone8ag0655 | 538 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 2 | 308 | 497 | IPR016163 | GO:0016620(InterPro) | |
| Cone8ag0655 | 538 | FunFam | ALD5p Mitochondrial aldehyde dehydrogenase | 62 | 335 | - | - | |
| Cone8ag0655 | 538 | FunFam | Aldehyde dehydrogenase, putative | 500 | 526 | - | - | |
| Cone8ag0655 | 538 | ProSitePatterns | Aldehyde dehydrogenases cysteine active site. | 332 | 343 | IPR016160 | GO:0016491(InterPro) | |
| Cone8ag0655 | 538 | ProSitePatterns | Aldehyde dehydrogenases glutamic acid active site. | 304 | 311 | IPR029510 | GO:0016491(InterPro) | |
| Cone8ag0655 | 538 | FunFam | Mitochondrial aldehyde dehydrogenase 2 | 310 | 499 | - | - | |
| Cone8ag0655 | 538 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 1 | 62 | 526 | IPR016162 | GO:0016491(InterPro) | |
| Cone8ag0655 | 538 | CDD | ALDH_F2BC | 55 | 530 | - | - | |
| Cone8ag0655 | 538 | PANTHER | ALDEHYDE DEHYDROGENASE-RELATED | 54 | 530 | - | GO:0004029(PANTHER) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone12ag1005 | Cone-Chr12:8514370 | Cone8ag0655 | Cone-Chr8:6514282 | 1.50E-56 | dispersed | |
| Cone13ag0118 | Cone-Chr13:701650 | Cone8ag0655 | Cone-Chr8:6514282 | 1.31E-119 | dispersed | |
| Cone14ag0722 | Cone-Chr14:3991627 | Cone8ag0655 | Cone-Chr8:6514282 | 2.83E-58 | dispersed | |
| Cone15ag0731 | Cone-Chr15:4201522 | Cone8ag0655 | Cone-Chr8:6514282 | 2.00E-58 | dispersed | |
| Cone16ag0751 | Cone-Chr16:8521129 | Cone8ag0655 | Cone-Chr8:6514282 | 1.32E-202 | dispersed | |
| Cone4ag0719 | Cone-Chr4:3888724 | Cone8ag0655 | Cone-Chr8:6514282 | 2.64E-201 | dispersed | |
| Cone7ag0693 | Cone-Chr7:3928633 | Cone8ag0655 | Cone-Chr8:6514282 | 5.30E-201 | dispersed | |
| Cone8ag0655 | Cone-Chr8:6514282 | Cone8ag1033 | Cone-Chr8:9552255 | 1.50E-58 | dispersed | |
| Cone10ag1447 | Cone-Chr10:11209411 | Cone8ag0655 | Cone-Chr8:6514282 | 1.58E-107 | transposed | |
| Cone12ag0631 | Cone-Chr12:5686090 | Cone8ag0655 | Cone-Chr8:6514282 | 0 | wgd | |
| Cone13ag0133 | Cone-Chr13:765770 | Cone8ag0655 | Cone-Chr8:6514282 | 4.80e-319 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone8ag0655 | K00128 | - | rcu:8282568 | 909.827 |