Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag0663 ATGTCATCATCATCTTCTTCAAATGGATCACATTCTATGTCAGATTCAACAAGCGTGACCCAAACCCCTCCTCTGCCTTCAACTTCCTCAACTTTGGCCTTGAATTCACCACCACCACCATCAAATGAAAATAACAAGGCTAATTCTTCACCTCCTCCATTATCTTCTTCTTCCTCCTCCTCCCCCTCACCCCCTGCTCCACCTACCTCAACCTTCATGCCTCCTCCACCAAAGTCACCCCCACCTTCATTGCCGCCTCAATTGCCTTCCGTTTCACCTCTGCCACCGGAATCATCTCTGCCACCATCTCCACCATCATCGCCGCCACCGTCTCCATCTCCATCTCTTTCCACATCCCCACCCCCTCAGTCAAGTACTTCTTCACTGCCCTCTTCTCCCTCACCACCTCCTAGCTCGTCTCCTAGTTTGAATCCTGATTCCACTCCATCAAGTTCACCCCCTCCTAATACTTTATCATCATCATCATCACCTCCACCACCATCCTCGGGTGAAACCTCTTATTCTTATACACCTCCACCGGCCCCACCATATGCCACATCATCATCATCTAGTGGGACAGGTTCTTCTCCTCCTCCTCCTTCTGATCATAGTAAGAACTCAGCATCTATGCCACCACAAGGAAGCGGATCTCTTTCTAATAATTCAACTACTGTGATGTATGTTTATGGCATTGCTGATCATCTACCAAACCCACCTATAATTTATTCACCCGGGTCACCACCACAAAGCTGGGTTAATCCTAATTCAACTGAGCAGAAGAATATTCATTCTCCCTCGGAATTTGGTGTAAGTGCTATAGCGTCATCATCAGGTCCTACAACAAGCTCTCCTAAGCTTTTCCCGACTGAGGCTGTCGGAAATACAACTCCGGCGAACATCAGCTCTCTGCTGTCATCGCCTTCCACTGGGAATACAGGAACTGTTGTTGGAGTGACTATGGCAGGAGTATTCGTCATTGGCATTATCTTCCTTGCTATTGGGTTCGTGTTAAGAAGGAGGCAGAGAAAACGAGTTGAGGTCTATTCGCCTCATTACATGGCCCCTCTGGCAAATGGATATGGGACAGATAGTCCTTATACTCAAGGCCAATTTTTCGCTGTAAACAGCTTTAGGATCCAAGGAGGCTATCCAGTTGGTGATCCAGAATCAGGTGTACTTAACAGTGGCAAGACTACCTTTAGCTATGAGGAGTTAATGGAGATAACTAATGGGTTTTCTCACCAGAACATCCTTGGTGAGGGTGGATTTGGAAGCGTATACAAGGGTAGGCTACAAGATGGTAGAGAGGTGGCTGTGAAGCAGCTGAAGGCGGGGAGTGGACAAGGAGAGAGGGAATTCAAGGCAGAAGTTGAGATTATTAGTCGCGTTCATCATCGACATTTGGTCTCTTTAGTCGGCTATTGCATATCTGCTCAACAGAGGTTGCTCATTTATGAATTTGTTCCAAATCAGACTCTAGAACATCACTTACATGGTAAAGGAATGCCAGTGTTGGAATGGACAAAAAGACTTAAGATAGCTCTAGGAGCTGCAAGGGGTCTAGCATATTTACATGAAGATTGTCATCCAAAAATTATTCATAGAGACATCAAATCTGCAAACATTTTATTGGATGAGGCTTTCGAGGCACAGGTAGCAGATTTTGGACTTGCTAGACTGGCAAATGACGCTAACACTCATGTATCAACTCGAGTCATGGGAACATTTGGGTATCTAGCACCCGAGTATGCAACAAGTGGGAAGTTGACAGATAGGTCAGATGTATTCTCCTTTGGAGTTGTGCTTCTTGAGCTTATCACTGGGCGTAAACCAGTCGATCCAACTCAACCTGTGGGAGAAGAGAGTTTGGTTGAATGGGCCCGTCCGCTCCTTATTCACACCCTTGATACTGGTGAATTCGGTGAATTGGTAGACTCATGTCTTGGAAAGCAATATGTGGAAGGTGAAATGTTTAAAATGATTGAAGCAGCAGGTGCATGTGTTCGCCACTCAGCTCCAAAAAGACCTCGAATGGTGCAGGTGGCAAGGGCATTAGATTTTGAAGGTGAAGTAAGAGATCTATCAAATGGTGTCAAAGTCGGCCAGAGCACGGCTTATGATTCTGCTCAATACGATCAAGAAATCCTGACATTCCGGAGAATGACATTCGGAAGCACGGATAGCTCAAAACATGAACTACACAGTGGAGAATTCAACTCCAGAGAAGTATCTGAATCTCAACTATCATGGAAATCTAACGATATATCAAGTTGTGAATCAGAATCTCAGGTGTTTAATCCTCATGGTGTCAGTGGGCCCCAAACTACTAATACTACTACTACTGCCGCTATGTCCTCTGGCTGA 2364 45.64 MSSSSSSNGSHSMSDSTSVTQTPPLPSTSSTLALNSPPPPSNENNKANSSPPPLSSSSSSSPSPPAPPTSTFMPPPPKSPPPSLPPQLPSVSPLPPESSLPPSPPSSPPPSPSPSLSTSPPPQSSTSSLPSSPSPPPSSSPSLNPDSTPSSSPPPNTLSSSSSPPPPSSGETSYSYTPPPAPPYATSSSSSGTGSSPPPPSDHSKNSASMPPQGSGSLSNNSTTVMYVYGIADHLPNPPIIYSPGSPPQSWVNPNSTEQKNIHSPSEFGVSAIASSSGPTTSSPKLFPTEAVGNTTPANISSLLSSPSTGNTGTVVGVTMAGVFVIGIIFLAIGFVLRRRQRKRVEVYSPHYMAPLANGYGTDSPYTQGQFFAVNSFRIQGGYPVGDPESGVLNSGKTTFSYEELMEITNGFSHQNILGEGGFGSVYKGRLQDGREVAVKQLKAGSGQGEREFKAEVEIISRVHHRHLVSLVGYCISAQQRLLIYEFVPNQTLEHHLHGKGMPVLEWTKRLKIALGAARGLAYLHEDCHPKIIHRDIKSANILLDEAFEAQVADFGLARLANDANTHVSTRVMGTFGYLAPEYATSGKLTDRSDVFSFGVVLLELITGRKPVDPTQPVGEESLVEWARPLLIHTLDTGEFGELVDSCLGKQYVEGEMFKMIEAAGACVRHSAPKRPRMVQVARALDFEGEVRDLSNGVKVGQSTAYDSAQYDQEILTFRRMTFGSTDSSKHELHSGEFNSREVSESQLSWKSNDISSCESESQVFNPHGVSGPQTTNTTTTAAMSSG 787
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 6652064 6656044 + Conep08aG0068600.1 Cone8ag0663 443212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag0663 787 MobiDBLite consensus disorder prediction 57 119 - -
Cone8ag0663 787 Pfam Protein tyrosine and serine/threonine kinase 415 649 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone8ag0663 787 MobiDBLite consensus disorder prediction 1 56 - -
Cone8ag0663 787 SMART serkin_6 412 661 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone8ag0663 787 MobiDBLite consensus disorder prediction 726 746 - -
Cone8ag0663 787 MobiDBLite consensus disorder prediction 171 185 - -
Cone8ag0663 787 SUPERFAMILY Protein kinase-like (PK-like) 392 686 IPR011009 -
Cone8ag0663 787 MobiDBLite consensus disorder prediction 246 292 - -
Cone8ag0663 787 MobiDBLite consensus disorder prediction 186 219 - -
Cone8ag0663 787 Gene3D Phosphorylase Kinase; domain 1 387 487 - -
Cone8ag0663 787 Gene3D Transferase(Phosphotransferase) domain 1 488 697 - -
Cone8ag0663 787 FunFam Proline-rich receptor-like protein kinase PERK8 385 487 - -
Cone8ag0663 787 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 292 721 IPR047117 -
Cone8ag0663 787 ProSitePatterns Protein kinases ATP-binding region signature. 418 440 IPR017441 GO:0005524(InterPro)
Cone8ag0663 787 ProSitePatterns Serine/Threonine protein kinases active-site signature. 532 544 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone8ag0663 787 MobiDBLite consensus disorder prediction 126 162 - -
Cone8ag0663 787 MobiDBLite consensus disorder prediction 240 292 - -
Cone8ag0663 787 ProSiteProfiles Protein kinase domain profile. 412 688 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone8ag0663 787 MobiDBLite consensus disorder prediction 1 219 - -
Cone8ag0663 787 FunFam proline-rich receptor-like protein kinase PERK8 488 700 - -
Cone8ag0663 787 CDD STKc_IRAK 418 686 - -
Cone8ag0663 787 MobiDBLite consensus disorder prediction 759 787 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone6ag0343 Cone-Chr6:1634537 Cone8ag0663 Cone-Chr8:6652064 1.49E-74 dispersed
Cone6ag0487 Cone-Chr6:2421458 Cone8ag0663 Cone-Chr8:6652064 9.39E-150 dispersed
Cone6ag1615 Cone-Chr6:12479507 Cone8ag0663 Cone-Chr8:6652064 1.13E-146 dispersed
Cone8ag0663 Cone-Chr8:6652064 Cone9ag0499 Cone-Chr9:2387964 1.85E-157 dispersed
Cone9ag0377 Cone-Chr9:1697380 Cone8ag0663 Cone-Chr8:6652064 2.73E-77 dispersed
Cone9ag1353 Cone-Chr9:10139305 Cone8ag0663 Cone-Chr8:6652064 2.76E-73 dispersed
Cone12ag0645 Cone-Chr12:5901197 Cone8ag0663 Cone-Chr8:6652064 0 wgd
Cone13ag1041 Cone-Chr13:8618068 Cone8ag0663 Cone-Chr8:6652064 3.31E-189 wgd
Cone19ag1031 Cone-Chr19:7670104 Cone8ag0663 Cone-Chr8:6652064 6.34E-182 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83115 PF12174 RST 1.20E-25 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag0663 - - - 0.0