Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag0675 ATGGAATTGGATACTTCATTCATAAGAGAGGATGATGATGGGCTTCGTGCAAACTGTTTGGGAGCAGAGAAAGTGAAAGAGTGTGAAAACTTTTTGTTGAAGGAAATGAGCATGGAAAGAAGAACAAGAAGAAGAAGTGCTCTTGTGTTTTGGAAAGTGGGTTTCTTTGTGGTTTTGGCACTAATGGAGGTTTCTTCTGCAAGTTTATCTCCTTCCGGTATTAATTATGAAGTTGTAGCTTTGATGGCCATAAAGAATGATCTGATAGATCCTCATAATGTTCTGGAAAATTGGGACATTAATTCTGTGGATCCTTGTAGCTGGAGGATGGTTACTTGCTCTTCCGACGGTTATGTTTCTACTCTGGGTCTTCCTAGCCAGAGTTTGTCTGGCACTTTATCTCCAGGAATTGGAAACCTTAGTAACTTGCAATCTGTGCTGCTTCAAAACAATGCTTTTTTTGGCCCTGTTCCGGCTACAGTTGGAAAATTGGAAAAGCTTCAGACTCTTGATTTATCCAACAATATGTTTAGTGGCGAAATTCCTGCTTCTTTGGGTGACTTAAGCAACCTCAACTATTTGCGGTTAAATAACAACAGCCTTATTGGACCATGTCCGGAGTCTTTATCCAAAGTAAAAGGTCTAACTCTCGTGGACTTTTCTTTTAACAATCTGAGTGGTTCCTTACCAAAAATATCAGCAAGAACTTTCAAAATTGTTGGAAACCCATTAATCTGCAGACCCAACAACTGTTCTGCTGTCTTCCCCGAGCCACTTTCCTTCTCGCCTGATTCTCTAAGTGCTGAATCAGTATCAGAATCTAAGAACCATCGCAGTGCAATTGCCTTTTCAGCCAGTTTCTCTGTTGCCTTTATTGTCCTTATTATTGTTGGATCGCTTATCTGGTGGAGATATAGACGCAATCAGCAGATTTTCTTGGATGTCAATGATCAATATGACGTGGAGGTATGCTTAGGCCATTTGAAAAGGTTTTCATTTAAGGAATTAAGGGCTGCTACGGATCATTTCAACTCGAAGAACGTATTAGGGAGAGGTGGGTTTGGGATTGTATATAAGGGTTGTTTGAATGATGGGACCATCGTGGCAGTCAAGAGGTTGAAGGACTATAATACAGCTGGTGGGGAAATCCAATTTCAGACTGAAGTAGAGATGATAAGCTTGGCATTGCATCGGAATCTTCTACGGCTTTTCGGGTTTTGCTCGACTGAAAATGAACGCCTTCTCGTTTACCCTTACATGCCCAATGGAAGCGTGGCATCTCGATTAAGAGATTGTATTCATGGCCGGCCAGCTTTAGACTGGATCAGGCGAAAGAGAATAGCTTTAGGTACGGCAAGAGGGCTAGTTTACTTGCACGAGCAATGTGACCCAAAAATCATACACCGAGATGTCAAAGCGGCTAATATTTTGCTTGATGAAGACTTTGAGGCTGTTGTTGGAGATTTCGGTTTGGCTAAACTTTTAGACCATAGAGATTCCCATGTAACTACAGCCGTTCGTGGAACTGTGGGCCATATTGCCCCGGAGTATCTCTCAACCGGGCAGTCATCAGAAAAAACCGATGTGTTCGGTTTTGGGATCTTACTTCTTGAGCTTATCACGGGTCAAAAGGCTTTGGATTTTGGACGAGCAGCAAACCAGAAGGGTGTGATGCTTGATTGGGTGAAAAAGCTTCATCAAGAGGGGAAGCTAAACCTAATGGTGGATAAGGATCTAAAGGCAAACTTTGACCGGGTTGAATTAGACGAAATGGTACAAGTTGCACTCCTGTGCACCCAATTCAATCCGACCCACCGGCCGAAAATGTCGGAAGTATTGAAGATGTTAGAAGGTGATGGTTTAGCTGAGAAATGGGAGGCTTCACATCCAATGGAGACACCGAGATCTCAATCAAGTGATCAAACCCCTCATCAAAAGTACTCAGATTACATTGAAGAATCTTCACTAATAGTAGAAGCAATGGAGCTTTCTGGGCCTAGGTGA 2004 42.51 MELDTSFIREDDDGLRANCLGAEKVKECENFLLKEMSMERRTRRRSALVFWKVGFFVVLALMEVSSASLSPSGINYEVVALMAIKNDLIDPHNVLENWDINSVDPCSWRMVTCSSDGYVSTLGLPSQSLSGTLSPGIGNLSNLQSVLLQNNAFFGPVPATVGKLEKLQTLDLSNNMFSGEIPASLGDLSNLNYLRLNNNSLIGPCPESLSKVKGLTLVDFSFNNLSGSLPKISARTFKIVGNPLICRPNNCSAVFPEPLSFSPDSLSAESVSESKNHRSAIAFSASFSVAFIVLIIVGSLIWWRYRRNQQIFLDVNDQYDVEVCLGHLKRFSFKELRAATDHFNSKNVLGRGGFGIVYKGCLNDGTIVAVKRLKDYNTAGGEIQFQTEVEMISLALHRNLLRLFGFCSTENERLLVYPYMPNGSVASRLRDCIHGRPALDWIRRKRIALGTARGLVYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQKALDFGRAANQKGVMLDWVKKLHQEGKLNLMVDKDLKANFDRVELDEMVQVALLCTQFNPTHRPKMSEVLKMLEGDGLAEKWEASHPMETPRSQSSDQTPHQKYSDYIEESSLIVEAMELSGPR 667
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 6742879 6748385 + Conep08aG0069800.1 Cone8ag0675 443224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag0675 667 Pfam Protein tyrosine and serine/threonine kinase 346 616 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone8ag0675 667 FunFam Putative LRR receptor-like serine/threonine-protein kinase 74 254 - -
Cone8ag0675 667 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 54 667 - -
Cone8ag0675 667 Pfam Leucine rich repeat N-terminal domain 75 114 IPR013210 -
Cone8ag0675 667 FunFam Somatic embryogenesis receptor-like kinase 1 420 636 - -
Cone8ag0675 667 Gene3D Transferase(Phosphotransferase) domain 1 420 634 - -
Cone8ag0675 667 SUPERFAMILY L domain-like 75 238 - -
Cone8ag0675 667 ProSiteProfiles Protein kinase domain profile. 343 632 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone8ag0675 667 SMART serkin_6 343 616 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone8ag0675 667 MobiDBLite consensus disorder prediction 631 646 - -
Cone8ag0675 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone8ag0675 667 ProSitePatterns Protein kinases ATP-binding region signature. 349 371 IPR017441 GO:0005524(InterPro)
Cone8ag0675 667 Gene3D Phosphorylase Kinase; domain 1 312 419 - -
Cone8ag0675 667 MobiDBLite consensus disorder prediction 627 646 - -
Cone8ag0675 667 SUPERFAMILY Protein kinase-like (PK-like) 327 645 IPR011009 -
Cone8ag0675 667 FunFam Somatic embryogenesis receptor kinase 1 312 419 - -
Cone8ag0675 667 Gene3D Ribonuclease Inhibitor 74 253 IPR032675 -
Cone8ag0675 667 Pfam Leucine rich repeat 141 201 IPR001611 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0650 Cone-Chr12:5934516 Cone8ag0675 Cone-Chr8:6742879 0 dispersed
Cone1ag0216 Cone-Chr1:1314311 Cone8ag0675 Cone-Chr8:6742879 9.01E-186 dispersed
Cone7ag0542 Cone-Chr7:2526940 Cone8ag0675 Cone-Chr8:6742879 7.63E-197 dispersed
Cone8ag0675 Cone-Chr8:6742879 Cone9ag0505 Cone-Chr9:2417772 5.62E-190 dispersed
Cone12ag0645 Cone-Chr12:5901197 Cone8ag0675 Cone-Chr8:6742879 3.63E-73 wgd
Cone13ag1054 Cone-Chr13:8658071 Cone8ag0675 Cone-Chr8:6742879 3.18E-283 wgd
Cone19ag1043 Cone-Chr19:7708908 Cone8ag0675 Cone-Chr8:6742879 2.09E-306 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83116 PF00288 GHMP_kinases_N 1.40E-16 CL0329 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag0675 - - - 0.0