Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag0680 ATGATAAACAAAATGAAGTCTTTCTCCCTCTTCGATTCTCACCTCATCTCTCTTTTCTTCCTGTGTTTCTTCTTCGACAAATCTCACGCCGACCCACGAGCCACAGAAGCAGCTCTCATATGCACAAACCGTACCGCTTTAGCCCCTCTTCGCCAGATCTTCATCGCAAACTTCTTAGCCACCATGGACGCACTGACCCCACTAATCGCTGCAAACAGATATGGCGCTGTAATAAACGGGACAGGAAACGCCACTGTTTACGCTTTCGGCGAGTGCATGAGAGACCTCTCGCAGCAAGACTGCAACCTCTGCATAGCCCAATGCAAGACCCAGATCCTCCGCTGCCTCCCCTTCCAGCTCCTAGTTCGCGGCGGAAGACTCTTCTACGACGGTTGTTATCTTCGCTACGACGACTATAATTTCTTCAACGAGTCTTTGAGTTTAGTGAACAAGACTGTTTGTGGGGGAGAAAATTTTGGGGGAGATTTGAAAGTTTTTAATGGGAATGTGGTGAAATTGGTCAAGAATTTGAGTTTAGAAGCGGTAAAGAGCGACGGTTTTACAGTTTCGTCGGTGGATTATGCAAATGCGACAGTTTTTGGGCTGGGGCAGTGCTGGAAATTTATAAGAGGGAATAGTTGTTCGAATTGCTTGAATGATGCGGCTAAGAAGATTGATTCATGCCCTCCGAAACAAGAAGGGAGAGCCTTGAATTCTGGTTGCTATTTGAGGTATTCTAGGGAGAGGTTTTACTATAACAATACTGACTCCAGTTCATCTTCTGGAAATGGAGGACGGAGCCGGTTAGCAATTATACTCTCTTCGGTATGTGCTGCAGTGGCAGTTATCGTAATTATTGGAACTATTGCTTTCTTTGCAAGGAAGAGAGTGTTGAAGAAAAATAGAGAGAGAAAGCAGCTAGGTGCTCTTCTAGCCACAGTAAACAAGTCCAAGCTCAATTTCTCATATGAAGTTCTAGAGAGAGCAACGCGTTACTTTGACAATTCCAATAAGCTTGGACAAGGTGGCTCTGGTTCTGTCTATAAAGGAGTATTGCCGGATGGGAAAGTAGTAGCGATCAAGAGGCTTTTCTTCAACTCAAGACAATGGGTTGACCATTTCTTTAACGAAGTCAACTTGATCAGTAACATAGACCACAAAAATCTCGTAAAGCTTCTAGGATGTAGCATAACTGGCCCAGAAAGCCTTCTTGTTTATGAATATGTCCCGAATCAAAGCCTCCACGATTACCTTACTGCTGAAAAGAATCGGCCGCTTAGTTGGGACGAGCGGTTTAAGATTATATTGGGTACCGCTGAAGGATTGGCTTATCTACACGAAGAATCGGAAGTCAGAATCATACATAGAGATATAAAGTTAAGTAACATTCTTCTTGAGGATGATTTCACACCGAAAATCGCTCATTTTGGGCTCGCTCGATTATTTCCTGAAGATAAGACACATATTAGCACTGCAATTGCTGGAACTTTAGGATATATGGCTCCAGAATATGTGGTTCGGGGAAAGTTGTCTGAAAAGGCAGACACTTACAGTTTCGGAGTTATGATTACTGAAGTAATAACTGGAAAGAGGAACAACTACTTCTCTCAAGATAGATTCTCAATCTTACAAATGGTTTGGAATCTATACGGATCAAGGAATCTTAGGGAAGCTGTTGATCCAATCCTGGATGGTAACTTTCGAGAAGAGGAGGCTTCTAGGTTACTTCAAATCGGGCTTCTTTGTGTACAAGCCTCAGCAGAGCTAAGACCGGCAATGTCAATGGTTGTTAAGATGGTTAACGGAAATATTGAGATTCCTCTGCCAACTCAACCTCCTTTTCTTAATTCGACTGGTTCTGCTGAGATGTTTCGGGCCCACATTCGCTTAGGAAATTCAAAATCTTTGCCGGATTCGAAAACACAATCTTCTGGGAATGACTGGACTCAAAGCTGGATCGAGCCCAGATGA 1971 43.48 MINKMKSFSLFDSHLISLFFLCFFFDKSHADPRATEAALICTNRTALAPLRQIFIANFLATMDALTPLIAANRYGAVINGTGNATVYAFGECMRDLSQQDCNLCIAQCKTQILRCLPFQLLVRGGRLFYDGCYLRYDDYNFFNESLSLVNKTVCGGENFGGDLKVFNGNVVKLVKNLSLEAVKSDGFTVSSVDYANATVFGLGQCWKFIRGNSCSNCLNDAAKKIDSCPPKQEGRALNSGCYLRYSRERFYYNNTDSSSSSGNGGRSRLAIILSSVCAAVAVIVIIGTIAFFARKRVLKKNRERKQLGALLATVNKSKLNFSYEVLERATRYFDNSNKLGQGGSGSVYKGVLPDGKVVAIKRLFFNSRQWVDHFFNEVNLISNIDHKNLVKLLGCSITGPESLLVYEYVPNQSLHDYLTAEKNRPLSWDERFKIILGTAEGLAYLHEESEVRIIHRDIKLSNILLEDDFTPKIAHFGLARLFPEDKTHISTAIAGTLGYMAPEYVVRGKLSEKADTYSFGVMITEVITGKRNNYFSQDRFSILQMVWNLYGSRNLREAVDPILDGNFREEEASRLLQIGLLCVQASAELRPAMSMVVKMVNGNIEIPLPTQPPFLNSTGSAEMFRAHIRLGNSKSLPDSKTQSSGNDWTQSWIEPR 656
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 6804886 6808130 - Conep08aG0070300.1 Cone8ag0680 443229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag0680 656 ProSitePatterns Serine/Threonine protein kinases active-site signature. 453 465 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone8ag0680 656 Gene3D - 37 141 IPR038408 -
Cone8ag0680 656 Gene3D - 148 250 IPR038408 -
Cone8ag0680 656 SMART serkin_6 333 593 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone8ag0680 656 FunFam Cysteine-rich receptor-like protein kinase 3 150 250 - -
Cone8ag0680 656 ProSitePatterns Protein kinases ATP-binding region signature. 339 361 IPR017441 GO:0005524(InterPro)
Cone8ag0680 656 MobiDBLite consensus disorder prediction 633 656 - -
Cone8ag0680 656 FunFam Cysteine-rich receptor-like protein kinase 2 34 141 - -
Cone8ag0680 656 Gene3D Transferase(Phosphotransferase) domain 1 409 606 - -
Cone8ag0680 656 FunFam Cysteine-rich receptor-like protein kinase 2 299 408 - -
Cone8ag0680 656 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 173 629 IPR052059 GO:0004674(PANTHER)|GO:0006468(PANTHER)
Cone8ag0680 656 MobiDBLite consensus disorder prediction 634 656 - -
Cone8ag0680 656 ProSiteProfiles Gnk2-homologous domain profile. 147 250 IPR002902 -
Cone8ag0680 656 FunFam Cysteine-rich receptor-like protein kinase 2 409 607 - -
Cone8ag0680 656 Gene3D Phosphorylase Kinase; domain 1 293 408 - -
Cone8ag0680 656 ProSiteProfiles Gnk2-homologous domain profile. 35 141 IPR002902 -
Cone8ag0680 656 SUPERFAMILY Protein kinase-like (PK-like) 319 617 IPR011009 -
Cone8ag0680 656 Pfam Salt stress response/antifungal 158 247 IPR002902 -
Cone8ag0680 656 Pfam Salt stress response/antifungal 49 139 IPR002902 -
Cone8ag0680 656 Pfam Protein kinase domain 334 554 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone8ag0680 656 ProSiteProfiles Protein kinase domain profile. 333 615 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone8ag0680 656 CDD STKc_IRAK 339 602 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0105 Cone-Chr11:455161 Cone8ag0680 Cone-Chr8:6804886 1.90E-110 dispersed
Cone12ag0659 Cone-Chr12:6043620 Cone8ag0680 Cone-Chr8:6804886 0 dispersed
Cone16ag0935 Cone-Chr16:9517690 Cone8ag0680 Cone-Chr8:6804886 6.34E-157 dispersed
Cone2ag0112 Cone-Chr2:550324 Cone8ag0680 Cone-Chr8:6804886 3.61E-169 dispersed
Cone5ag0979 Cone-Chr5:4192369 Cone8ag0680 Cone-Chr8:6804886 5.19E-118 dispersed
Cone8ag0680 Cone-Chr8:6804886 Cone9ag1062 Cone-Chr9:5835150 6.03E-106 dispersed
Cone8ag0679 Cone-Chr8:6769285 Cone8ag0680 Cone-Chr8:6804886 9.33E-146 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83118 None None None None Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag0680 - - - 0.0