Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone8ag0710 | ATGCCTTTTCTATTCTCAACCTTCACTTCCTCTTCACCAGTTCAAGACCCAGAAGTTGTAGTCCAAGAAGTACTTCAGAGCATCAATGGGTCTGGAAGGCAATTGGGCTATCTATCATGTGGCAATGGGAACCCCATTGATGAATGTTGGAGGTGTGACCCCAACTGGGAAAAGAACCGCAGAAGGTTAGCGAATTGTGCAATAGGGTTTGGCAAAAACGCGGTTGGAGGCAGGGACGGAAAGTTCTACGTGGTCACAGACCTGTCTGATAACGACCCCGTTAACCCCAAACGCGGCACTCTTAGGCATGCAGTGATCCAAGATGAACCCCTTTGGATCATCTTCAAACGTGACATGGTCATCAAGCTAAAAGCTGAGCTTATAATGAACTCATTCAAGACCATCGATGGACGAGGAGCCCAAGTACACATTGCTGGAGGGCCGTGCATTACTATACAATATGTGACGAATATTATCATTCATGGAATCAATATACATGATTGCAAACGAGGGGGGAATACTTATGTTAGAGATTCTCCAAATCATTTTGGGTGGAGGACTCTATCAGATGGAGATGGGATTTCAGTTTTTGGGGGAAGCCATATTTGGATTGATCATTGTTCTCTTTCTCGGTGCCGCGATGGTTTGATCGATGTGATTCATGGATCTTCGGCTATTACAATTTCTAATAATTACATGACACAGCATGATAAAGTGATGCTTTTGGGTCATAGTGATACTTATAAAGCTGATAAGCGTATGCAAGTTACTATCGCTTTCAACCATTTTGGAGAAGGGCTTGTGCAAAGGATGCCAAGATGTAGATTTGGGTATTTTCATGTGGTGAATAATGACTACACCCATTGGAAGATGTATGCAATTGGTGGTAGTGCATCTCCTACAATCAATAGTCAAGGCAATAAATTTCTTGCTCCCAATATTGGATCGGCAAAAGAGGTAACAAAACACGAGACGCAAGGGAATGAATGGAAGAAATGGAACTGGAGATCACAAGGAGATTTGATGTTGAATGGGGCATTCTTTACCCAATCTGGGGCTAGTACAACATCTTCTGCCTTCGCAAAGGCAATGAGCCTAAGCGCAAGACCATCTAACTGGGTGGGTTCAATCACTGCCGGGGCAGGTGTTCTTAAATGCAAAAAGGGTTCAGCTTGCTCATGA | 1182 | 43.74 | MPFLFSTFTSSSPVQDPEVVVQEVLQSINGSGRQLGYLSCGNGNPIDECWRCDPNWEKNRRRLANCAIGFGKNAVGGRDGKFYVVTDLSDNDPVNPKRGTLRHAVIQDEPLWIIFKRDMVIKLKAELIMNSFKTIDGRGAQVHIAGGPCITIQYVTNIIIHGINIHDCKRGGNTYVRDSPNHFGWRTLSDGDGISVFGGSHIWIDHCSLSRCRDGLIDVIHGSSAITISNNYMTQHDKVMLLGHSDTYKADKRMQVTIAFNHFGEGLVQRMPRCRFGYFHVVNNDYTHWKMYAIGGSASPTINSQGNKFLAPNIGSAKEVTKHETQGNEWKKWNWRSQGDLMLNGAFFTQSGASTTSSAFAKAMSLSARPSNWVGSITAGAGVLKCKKGSACS | 393 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 7123264 | 7124696 | - | Conep08aG0073300.1 | Cone8ag0710 | 443259 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone8ag0710 | 393 | SUPERFAMILY | Pectin lyase-like | 29 | 386 | IPR011050 | - | |
Cone8ag0710 | 393 | PRINTS | Pollen allergen Amb family signature | 90 | 115 | IPR018082 | - | |
Cone8ag0710 | 393 | PRINTS | Pollen allergen Amb family signature | 292 | 311 | IPR018082 | - | |
Cone8ag0710 | 393 | PRINTS | Pollen allergen Amb family signature | 66 | 83 | IPR018082 | - | |
Cone8ag0710 | 393 | PRINTS | Pollen allergen Amb family signature | 126 | 142 | IPR018082 | - | |
Cone8ag0710 | 393 | PRINTS | Pollen allergen Amb family signature | 270 | 289 | IPR018082 | - | |
Cone8ag0710 | 393 | PRINTS | Pollen allergen Amb family signature | 190 | 211 | IPR018082 | - | |
Cone8ag0710 | 393 | PRINTS | Pollen allergen Amb family signature | 363 | 386 | IPR018082 | - | |
Cone8ag0710 | 393 | PRINTS | Pollen allergen Amb family signature | 333 | 357 | IPR018082 | - | |
Cone8ag0710 | 393 | Pfam | Pectate lyase | 128 | 309 | IPR002022 | - | |
Cone8ag0710 | 393 | FunFam | Pectate lyase | 43 | 385 | - | - | |
Cone8ag0710 | 393 | SMART | amb_all | 118 | 315 | IPR002022 | - | |
Cone8ag0710 | 393 | Gene3D | - | 43 | 385 | IPR012334 | - | |
Cone8ag0710 | 393 | PANTHER | PECTATE LYASE 18-RELATED | 14 | 389 | IPR045032 | GO:0030570(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone1ag0495 | Cone-Chr1:4834236 | Cone8ag0710 | Cone-Chr8:7123264 | 3.02E-58 | dispersed | |
Cone2ag0944 | Cone-Chr2:35120894 | Cone8ag0710 | Cone-Chr8:7123264 | 1.75E-232 | dispersed | |
Cone4ag0383 | Cone-Chr4:1736681 | Cone8ag0710 | Cone-Chr8:7123264 | 4.99E-202 | dispersed | |
Cone7ag0370 | Cone-Chr7:1620380 | Cone8ag0710 | Cone-Chr8:7123264 | 1.75E-202 | dispersed | |
Cone8ag0710 | Cone-Chr8:7123264 | Cone8ag0841 | Cone-Chr8:8427211 | 3.66E-90 | dispersed | |
Cone9ag1106 | Cone-Chr9:7088960 | Cone8ag0710 | Cone-Chr8:7123264 | 2.96E-144 | transposed | |
Cone12ag0688 | Cone-Chr12:6283813 | Cone8ag0710 | Cone-Chr8:7123264 | 1.14E-286 | wgd | |
Cone13ag0192 | Cone-Chr13:1209138 | Cone8ag0710 | Cone-Chr8:7123264 | 3.11E-222 | wgd | |
Cone16ag0056 | Cone-Chr16:296641 | Cone8ag0710 | Cone-Chr8:7123264 | 6.19E-227 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone8ag0710 | K01728 | - | rcu:8285451 | 650.973 |