Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag0714 ATGTCTGAAAATCATGATTTAGAGCGGGAATTCGGAGGATCTGGAGCTGTAAGATATGGAAATCAAGAGCGTGATCGAAATGAAATCGAAGGGAGCTATTCAGAGCCGATTTCGTATCCTAATGGAGCTACGAACTTGGAGCAAGATCATGTTAGCTCGAAGGAACTGAACGGGCTTATCCATTCCCTACCCAATGAGGAACTGGAACCTGTTCCGGACCATAAAGGGGCTATGGAAGGTGCAGACGTTACTGTACAAGATGATCCAGACGATGGAGTAGGGTCTGAGGGTACAGTAAGAGAAGAAATGTTTGAAGATTGTGCGGATGAGTTAGGCTCCAATGCTGATAGCAAAGAAGCAGTGGCCTCTATTGAAATAGAAGCGAATTATGGGGAGGAACATCGTGGTACTGATGCCATGCAAGAGAGTACGTTTCAGGAAACAAGCAACGGCGAGGTAGATGGTGAGTTGATTGGTGAAGTGGAGCGCATCAAGAATATGCTGGGGAAGACTGCTGGTGAGAAAGAAATTGATGCCAAAGAATTGAAGGAAGAGAGGGAAGCTTTTGCGAGAGAGCTTGCTAATTTTCATCATCAACTTAAGATTCTCACTAATCAGGAGTCATTGCTTGATGAATATGGCAGTGGGTTTGCTGCTAATATTCACAAAGCAGAAGTTGGACCTGGTGGAGAGAAGATTCCTGTGGTTGATATACCATTGAAAGATTCAATGAGTGAGTGCTCGCAGTTTCTGAGAGGTGCCTTGGAACAGCGGCTACAGATGGAGGCTACAGTTAGAGAACTCCATGCAATTCTTTATATGAAGGATCAGCAGATTGAAGGTCTCAATGCAACTGTTGCTGGATTTTCAGACAGGATGTTAGCTTCTCTTGTCCCAGTAATTAATCAACAAGAATTATTGGATGATTCTGTTTCTGGAATATTAATTAATGTCGAGAGAGGAACTTCTTTTTTGATGGAGAACTATAACCAAATGCTTTGGGAAATTGATCAGCTTAGGCAATGTTTGTCCAGGACCGGGTTGGTTAATGGTTTTCAGGAGTTTGGGGCAATCTTTGCTGCTGCTCGTGATGAGTTGCTGGAGCTAAAAGGAAAAGAAATGCACTTTGTTGAACGATTAAACCATCTAGAAGATGAAAATAGGAAATTGCTGGAGCAAATAGATAATGACAGGTTGATGATTGATTCAGTAAACAAAGAACTTGGGAAAGCAAAGACGGAGCTTGAGCAGGAAAGGGTCAGGTTTTCTAATACCAAAGAGAAGCTTACCATGGCTGTGACAAAAGGCAAAGCTTTAGTACAGCAACGTGATACATTGAAGCAGTCCCTTGCTGATAAAACAAGTGAGCTTGAGATATATTTACTTGAATTGCAAGAAAAATCAACTGCACTCGAGGCTGCTGAATTGAGCAAGGTGGAGCTGGTCAAATGCGAAAATCTGGTTGTATCAGTGCAGGAAAACCTATCACAAAAGAGTGAAGTTGTTGCACAATTTGAAGAAATTTTGTCTCAAGTTGACATACCTGATGAACTTCAGTCAAAGGATGCTATACAGAAACTCAGAATTCTTGTTGGTGAGAATGAGAAAATGAAGGGTATTTACATAGAATGCCAAAAACTGCAGGAAAATGTATTGCAAAAGGATGCAGTTGTTGCAAAGTTTGAAGAAATTTTGTCTCTAGCTGATGTACCTGAGGGACTTCACTCAGAAGATATTATAGAGAGACTGAGGATGCTCGTGGATGAGAACGAGAAAATGAAGGGTGTTTCCATAGAATACCATAAATCAAACCATGCTTTATCATCGGTTGATCTACCAGAAATTATTTCATCTTCCAACTTGGAATCTCGTGTGGGATGGCTTAGGGAATCATTTTTTCAGACAAGAGATAAACTAATCGAGTTGAAAGATGAACTTGCTAGAACAAGGGAAGCTGGACATAAAGAGATTGACCGCCTAAGCACATCATTTTTAGTGGAATTTCTGGAAAAGGACTTTCTACAGAGTGAATTGGACAGTCTAACATGCAAATACAAAGAGAGAGTTGAACAAGAGTATGAGATTTCATTACAGAAGGATCAGGTGGTAAAACTGCTGCTAGAAGCTTCTGGAATTGCAGTAGATGATGAAGGGGTCATTGAAGCTTCCTCTGACTTTGCCATGCTTGTTGAAAGATGCTTTCAGAAGATAAAAGAGCAGGGCAGGGAAGCTATGGACTCTTCTCATGCTGATGCGGATTCATTCGAAAAAATTCAATCTCTCTTGTATGTAAGGGATCAGGATTTGAGGCTGTGTGAGGAAATACTAGAAGAGGAGTTCTCAGAAATGAATGGTTTATCAAACAAGTTGAGAGCAATGTCTCAAGAACTCTTGGAACTGAAAGAAGAAAGAAGCTCTTTACAAAAGGATCTTGAAAGAACAGAGGATAAATCATCAGTTTTAAGGGAGAAGTTGTCCATGGCAGTTAAGAAAGGAAAGGGACTTGTTCAAGACCGGGAAAACATGAAACGCCGTTTAGATGAAAAGGACTCGGAAATTGAGAAACTAAAGCTTGAATTCCAAAATCAAGAATCCATAGTGGCCGAGTGCAGGAACCGAATCGATAGTTTGTCTACTGATGTGGAGCGTATCCCAGTGTTGGATTTTGATCTTGGTGCTATGAAAAATGAAAAGGATCGGCTGGAACAGAACATTGAAAACTTCAAAAATCTTTTGGATGAGAGGGACTTGGAAGTTGAGAAATTAAAGCTGGAATTCAGGAATCAAGAATCTGCAGTTGTCGAATGTAGGTCCCAAATTGATAGATTATCAGCTGATGTGGATCGCATCCCGACTTTGGAGGCTGATTTTGTTGCTATGAAAGACCAAAGGGATCAGCTTGAGCAGTTCTTGTCGGAGAGCAATAATATGTTACAGAAAGTAATTCAATCTATTGATGGCATTCTACTTCCTACTGGTACAGTTTTTGAAGAGCCTGTAGGAAAGTTACTTTGGCTAGCAAGTTACATTAACGAATGTCAAGATATTAAGACACATGCAGAGGAAGAGTTGTCAAGGCTAAAAGAGGAAGAGGGTAATCTTGCTATTAAACTAGCAGATGCCATAGCTACAGTGAAATCCCTGGAAGATACTTTATCAGATGCACACAGACACATTTCTCAACTTACTGAGGAAAAGAGGGAGATGGAAGAGAGTAAGGTGAATGCTCAAGAAATGTTACAGAAAGCAATAAATGAAGCTTCTTCCCAGTCTAGCCAGTTTTCTGAGGCTTGTTCAACTAGGAATTCACTTGAGGAGGCCTTGTCACTGGCAGAAAATAAAGTATCAGAGCTCATCAATGAGAAAGAAGAAGCTAACATTGCACGAGTTTCTGTGGAGATGGAGCTTGAGAAAATGGAGAAGGAAATGGCTGTTCAAACTAACAACCTGGCAGAGGCCCACGAAAAAATAAAGTCACTTGAAGATGCACTTTTGCTTGCGGCAACTAATATTGATTTATTGAGAGGACAGACTGATGAAGCACAGGCTGGAAGAGTTGGCTTGGAGACTGAGCTTGAGAAAGCAAAGGAGGAAATGACTGTTCAAACTAACAAACTGACAGAGGCTTATGAAAGAATAAAATTGCTGGAAGATGCACTATCTCAGATGGAGACAAGTGTTGCTTTACTGAGAGAACAACATGATCAGGCACAAGGTGGGAGAACCAAATTAGAGATCAAGCTTAAGAGACAAGAAGAAGAAGCTGAGTCCCATGCCAGCAAACTGGTTGATGCCTCGTCGACTATAAAATCACTGGAAGATGCATTGTTCAAGGCAGAGGGTGATGTTTCTGTACTTGACCGGAGAAGGAAAAATGCTGAAGATGAGATATTAATACTGAAGGCCAAGTTAAATGAATGCATGGAAGAGTTGTCTGGGACCAGTGGCAGTGTAGAAAAGAGGTCTGTGCAGCTTTCTGGGTATCTAAATGATCTTCAGGAGCATATGAAAGACGAGACACTTTTGACCAAAATCTCAAGATCACTTGAGAAGAAATTTGAAAGCCTGAAGGATGTGGACCTCATTCTGAAAAGTATAAGTGACCATCTTGTAGAGTGGGGTTTGGGAGATTTGGAGAGTCAAAATTCCTTGGAGGATTCATCTGTAATCAAACCATTCTCAGATGCCAATGCCAGTGTCGACGTTGAAAAAGATAATAGTGAAGTATTTGTTGCAGATGGGGATGACAGTGTTTCATTATCTTATAGAAAGACGCTGGAAGGGTTCCATTTAAGAAACAAAATTCTCACAGATAAGTTTGAGGGGTTCTCTCACTTTTTGGATATATTTATTGCCGATCTCTCGAAAAGATTGAAGGCAATGAAGGACAGGATGGCTCTTGCATTTGATCAGATTGAATCTTTGAAGCAAAAGACAAAAGATCTAGAAAACTTCAAACAGGAACAAGAGAACAGCACAGCCATTCTGGAAGATGATGTTAGAAGACTAGTGGATGCCTGTAGTGTTGCCACCAGAGAACTGCAGTTTGAAGTTAAGAATAGCCTACTGGACCTCAGCTCTGTTCCAAAGCTTGAAAATTTGAAGAATAGTCCATTGGTGGAAATGGGAGAATTTGGTGGAGCGATCAAGCACCAGCAAAGACTTTCTGACAGAAAACATGCCAAAACCATTGAAGAATTGTTATTTGAAACTAGAAAAGTTCATTCTTTGGCTAAACATTTTGAAACCAGTAGTAATATTGCTGCTGCTACCATCGAAGACTTACAGAACAAATTGGAAGTGATTAGAACAACTTCTGAAGAGGCCATGAAAGAAAAAGATTTAAACTTGATGGAGACTCATGTAGAATCATTGAAAAGCTCATGCCATTCACTGAGGCTTCAACTTGATGATTATAAAGCTATAGAGGAAAAGTTGAAGGAAAGAGAGGCAGAGGTTTCATCGATGCACAATAATGTGTCAGTGAAGGAACAAGAGGCAAAGGAATCTCTGATGTCAGCATCCCAAATGAAAACCCTCTTTGAAAAAATTAGAGAAATTGAGACCCATACGCCCATTTCAGAAGTAGGTACCCAAGAGATAGATAGTTCAATTGATGTGAAGAAGCTCTTTTACATTGTTGAAACTTTTATTGAGTTGCAGCATGAAATAAACTTATTATTAAATGATAAAGAAAAGCTGCAGTCAACAGTTTCTACTCAAACTCTTGAAATTGAGCACCTGAGAAATGTAGTTGATGAAGGGATGACATATAAACAGGATTCAGAAAAGATGAAAAATGAACTATTAGAGATCACATTTTCTCTGGAGAAAATTGTTAGTTTATTGGGTGGTGCTAGTTTCACTGGAGACCGAAAATCAGATGTTGTGAAGGGATTATTACGAGAAGTGGAAAAACAGGCTACAGCTGTTCTTTCTGAATCTGAAATTTTGAAATCCAGATCTGAGAAACTTAATATGAAGTTGGATGGTAGCCAAAAATTTGTAGAAGAATTATCAGCAAAGGTTCAACTGCTTGAAGATTCACTACAAGCCAGGACTGCTCAGCCAGAGATTATCCAGGAAAGAAGTATCTTTGAAGCACCCTCTTTACCTTCTGGATCAGAGATATCTGAAATTGAAGATGCGGGAACGCTCGGAATGAATCCAGTAGCTTCAGTCCCCTCAGCCACTCATGTAAGAACTTTACGTAAAGGGTCAACTGACCATCTCACAATCAATATAGGTTCAGAATCTGATCGATTAATAAAAACTAACGAGGAAACAGACGAGGACAAAGGTCATGTGTTTAAGTCCCTTAACTCAACAGGTCTCATTCCAAAACAAGGAAAACAGATTGCAGATAGGGTTGATGGAATTTGGGTATCTGGTGGTCGAGTCTTGATGAGTCGTCCGGGTGCAAGGTTAGGCTTCATTGCCTATTGGCTCTTGCTACACATATGGCTTCTTGGAACTATCTTGTAA 5985 40.22 MSENHDLEREFGGSGAVRYGNQERDRNEIEGSYSEPISYPNGATNLEQDHVSSKELNGLIHSLPNEELEPVPDHKGAMEGADVTVQDDPDDGVGSEGTVREEMFEDCADELGSNADSKEAVASIEIEANYGEEHRGTDAMQESTFQETSNGEVDGELIGEVERIKNMLGKTAGEKEIDAKELKEEREAFARELANFHHQLKILTNQESLLDEYGSGFAANIHKAEVGPGGEKIPVVDIPLKDSMSECSQFLRGALEQRLQMEATVRELHAILYMKDQQIEGLNATVAGFSDRMLASLVPVINQQELLDDSVSGILINVERGTSFLMENYNQMLWEIDQLRQCLSRTGLVNGFQEFGAIFAAARDELLELKGKEMHFVERLNHLEDENRKLLEQIDNDRLMIDSVNKELGKAKTELEQERVRFSNTKEKLTMAVTKGKALVQQRDTLKQSLADKTSELEIYLLELQEKSTALEAAELSKVELVKCENLVVSVQENLSQKSEVVAQFEEILSQVDIPDELQSKDAIQKLRILVGENEKMKGIYIECQKLQENVLQKDAVVAKFEEILSLADVPEGLHSEDIIERLRMLVDENEKMKGVSIEYHKSNHALSSVDLPEIISSSNLESRVGWLRESFFQTRDKLIELKDELARTREAGHKEIDRLSTSFLVEFLEKDFLQSELDSLTCKYKERVEQEYEISLQKDQVVKLLLEASGIAVDDEGVIEASSDFAMLVERCFQKIKEQGREAMDSSHADADSFEKIQSLLYVRDQDLRLCEEILEEEFSEMNGLSNKLRAMSQELLELKEERSSLQKDLERTEDKSSVLREKLSMAVKKGKGLVQDRENMKRRLDEKDSEIEKLKLEFQNQESIVAECRNRIDSLSTDVERIPVLDFDLGAMKNEKDRLEQNIENFKNLLDERDLEVEKLKLEFRNQESAVVECRSQIDRLSADVDRIPTLEADFVAMKDQRDQLEQFLSESNNMLQKVIQSIDGILLPTGTVFEEPVGKLLWLASYINECQDIKTHAEEELSRLKEEEGNLAIKLADAIATVKSLEDTLSDAHRHISQLTEEKREMEESKVNAQEMLQKAINEASSQSSQFSEACSTRNSLEEALSLAENKVSELINEKEEANIARVSVEMELEKMEKEMAVQTNNLAEAHEKIKSLEDALLLAATNIDLLRGQTDEAQAGRVGLETELEKAKEEMTVQTNKLTEAYERIKLLEDALSQMETSVALLREQHDQAQGGRTKLEIKLKRQEEEAESHASKLVDASSTIKSLEDALFKAEGDVSVLDRRRKNAEDEILILKAKLNECMEELSGTSGSVEKRSVQLSGYLNDLQEHMKDETLLTKISRSLEKKFESLKDVDLILKSISDHLVEWGLGDLESQNSLEDSSVIKPFSDANASVDVEKDNSEVFVADGDDSVSLSYRKTLEGFHLRNKILTDKFEGFSHFLDIFIADLSKRLKAMKDRMALAFDQIESLKQKTKDLENFKQEQENSTAILEDDVRRLVDACSVATRELQFEVKNSLLDLSSVPKLENLKNSPLVEMGEFGGAIKHQQRLSDRKHAKTIEELLFETRKVHSLAKHFETSSNIAAATIEDLQNKLEVIRTTSEEAMKEKDLNLMETHVESLKSSCHSLRLQLDDYKAIEEKLKEREAEVSSMHNNVSVKEQEAKESLMSASQMKTLFEKIREIETHTPISEVGTQEIDSSIDVKKLFYIVETFIELQHEINLLLNDKEKLQSTVSTQTLEIEHLRNVVDEGMTYKQDSEKMKNELLEITFSLEKIVSLLGGASFTGDRKSDVVKGLLREVEKQATAVLSESEILKSRSEKLNMKLDGSQKFVEELSAKVQLLEDSLQARTAQPEIIQERSIFEAPSLPSGSEISEIEDAGTLGMNPVASVPSATHVRTLRKGSTDHLTINIGSESDRLIKTNEETDEDKGHVFKSLNSTGLIPKQGKQIADRVDGIWVSGGRVLMSRPGARLGFIAYWLLLHIWLLGTIL 1994
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 7168428 7176752 - Conep08aG0073700.1 Cone8ag0714 443263

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag0714 1994 MobiDBLite consensus disorder prediction 37 52 - -
Cone8ag0714 1994 Coils Coil 1010 1037 - -
Cone8ag0714 1994 Coils Coil 1836 1856 - -
Cone8ag0714 1994 PANTHER COILED-COIL DOMAIN-CONTAINING PROTEIN 158 96 913 - -
Cone8ag0714 1994 Coils Coil 1283 1310 - -
Cone8ag0714 1994 SUPERFAMILY Tropomyosin 1131 1337 - -
Cone8ag0714 1994 Coils Coil 1178 1268 - -
Cone8ag0714 1994 Coils Coil 776 824 - -
Cone8ag0714 1994 Coils Coil 1101 1163 - -
Cone8ag0714 1994 Coils Coil 172 199 - -
Cone8ag0714 1994 Coils Coil 891 925 - -
Cone8ag0714 1994 Coils Coil 1717 1737 - -
Cone8ag0714 1994 Coils Coil 1629 1659 - -
Cone8ag0714 1994 Coils Coil 380 421 - -
Cone8ag0714 1994 Coils Coil 960 980 - -
Cone8ag0714 1994 Coils Coil 1045 1086 - -
Cone8ag0714 1994 MobiDBLite consensus disorder prediction 1 94 - -
Cone8ag0714 1994 Coils Coil 1592 1612 - -
Cone8ag0714 1994 Coils Coil 1451 1492 - -
Cone8ag0714 1994 Coils Coil 839 873 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag0714 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone7ag1767 Cone-Chr7:11649314 Cone8ag0714 Cone-Chr8:7168428 4.04E-26 dispersed
Cone8ag0714 Cone-Chr8:7168428 Cone4ag1862 Cone-Chr4:13349275 1.18E-27 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g1114 . . . . . . . . Cmo04g01902 Cmo18g00713 . Cma18g00726 . Car18g00674 Sed06g1718 Cpe09g00563 Cpe01g01587 Bhi07g01850 Tan04g0116 Cmetu10g1236 Lac13g0100 Hepe10g1555 . . Cla05g02625 Cam05g2815 Cec05g2851 Cco05g2882 Clacu05g2819 Cmu05g2667 Cre05g2783 . . Cone8ag0714 . Lsi04g00640 . . . . Blo11g00999 . . . . . . . . . Cma04g01803 . Car04g01816 . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004326 1 1 1 1 1 1 2 1 1 1 1 1 3 1 1 2 1 1 2 1 1 1 1 1 1 1 1 4 5 1 42