Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag0720 ATGACAGAAAATCAAGGAAAGAGTGAGACAATGGCAAAGCAGAAGAGAGAAAGAAACTTAGTTGCTCTTACAGGAGGCGCTGCTTTGCTCGCACTGGCCGTGAACTTCGCAATTTCCGCCATCAATAGGCACAGAAAGAAGAAAGATCTTCCTGGATTTAAGGTTCGCTCCAATCTATCTGCATCTGAAATACTTAAGTTGGCTAATAGAATCATTTCCAAGTCAAAGCAGGTTTATGATGCAGTTGCCTCAGTTCCACTTGACAAGGTTACATATATGAATGTTATATCACCCTTGGCAGAATTAGAAACTGAACAGTTTTCACTGGTTCAGTCTTGTGTGTTCCCGAAATTGGTATCCACTTCAGATGATGTACGCAAAGCCAGTGCTGAGGCAGAAAGGAGAATAGACAGTCATGTTCAGATGTGCAGCAAGCGTGAAGATGTTTATCGTGTTGTCAAAGCTTTTGCTGCTAAGGGGGAATGGTTAAATGCTGAAGCTAAGCACTATGTCCAGTGCCTGGTGAAGGACTTTGAGCGGAGTGGGTTGAACCTTACTTCAGCAAAGAGGGAGGAAATGCAGCGATTAAGAGCGCAAATTGATGAGCTAAGCCTACGATATATTCAAAATCTGAATGAAGATAGTACTTCTTTACTCTGTACTGAGGCTGAACTAGATGGTTTACCAAAAGAAGTCCTTAAGTGTCTCGACAAAGCTGATAACAGTAAATTCAAAGTAACCATGAGAAGCCATCACATTGCAGTAGTGTTGGAACATTGCAAGGTGGGAACAACAAGGAGGATGGTAGCAGTAGCATATGGGAAAAGGTGTGGAGAAGTGAATCTTTCTGTCTTAGTAAATATGGTGCATTTGCGCCATAAGTTTGCTCGTTTACTTGGATACTCCAACTATGCAGACTATGCTGTTGATCATAGAATGGCAAAGACACCGTCTAAGGTATTTGAGTTCTTGGAGAATATATCTGTTAGTTTGACAGACTTGGCTGAAAAAGAACTTGCACAATTGAAGGAGCTAAAGAAGAAAGAGGAAGGAGAATCTCCATTTGGAATTGAGGATCTTTTGTTCTATATCAAGAAGGTTGAAAATGAGCACCTTAATCTGGACATTGCAACTCTCAAGCAATACTTTCCTGTCAGTTTGGTTCTATCAGGGATCTTCAAGATATCCCAAGACCTTTTTGGTCTAAGGTTTGAGGAAGTGACAGATGCTGAAACTTGGCATTGTGATGTTCGTTTATTTTCAGTGTTCGACCTAACTTCCGGTGAACTAATAGGTTACTTCTACCTTGATCTGTACACAAGGGTAGGGAAATATAATCATACCTGTGTGGTGGCTCTTCAAAACAGTGCATTACTTCCAAACGGTGCTCATCAGATATCAGTGCCATTGCTCCTAGCTCAGTTTCACAAGGATGTTAAGGGAGGTCATTCTGTGCTGTTGCGGTTCTCTGAGGTGGTTAATCTTTTCCATGAGTTTGGCCATGTGGTTCAGCATATTTGCAACCGTGCATCATTTACCCGATTTTCAGGGCTGCGTGTTGATCCTGATTTTGTGGAGATTCCCTCTCAGATGCTAGAGAACTGGTGTTATGAAAGTTCCTCGTTGAAGTTGTTATCTGGTTTCCATCAGGATATTACAAAACCCGTCAAAGATGAAATATGTGAATCACTCAAAAGATGGCGATGTTCCTTTTCTGCACTTAAACTGAAGCAAGAAATTCTTTATTGTCTTTTTGATCAAATTATACATTCTGCTGAAAATATCGACATCGTTGAATTATTCAAGCAACTTCATCCAAAGGTGATGTTAGGTTTGCCTATGTTAGAAGGAACCAATCCAGCTTCTTGTTTTCCACGTAGTGCTATTGGTTATGAAGCTGCTTGTTATAGTGGCATTTGGAGTGAGGCTTTTGCAGCTGATTTATTTGCCTCAAAATTCCGTGATGGTCTTCTGAACCAGTATGTGGGCATGCAATTCCGAAACAAGGTATTGGCTCCAGGAGGTTCAAAGGAACCGATCGAAGTTCTTTCAGACTTCCTCGGGCGAGAACCTTCAGTTCAAGCTTTCATTGACCTCAAAACTGAATGTAGCTTGTGA 2118 41.27 MTENQGKSETMAKQKRERNLVALTGGAALLALAVNFAISAINRHRKKKDLPGFKVRSNLSASEILKLANRIISKSKQVYDAVASVPLDKVTYMNVISPLAELETEQFSLVQSCVFPKLVSTSDDVRKASAEAERRIDSHVQMCSKREDVYRVVKAFAAKGEWLNAEAKHYVQCLVKDFERSGLNLTSAKREEMQRLRAQIDELSLRYIQNLNEDSTSLLCTEAELDGLPKEVLKCLDKADNSKFKVTMRSHHIAVVLEHCKVGTTRRMVAVAYGKRCGEVNLSVLVNMVHLRHKFARLLGYSNYADYAVDHRMAKTPSKVFEFLENISVSLTDLAEKELAQLKELKKKEEGESPFGIEDLLFYIKKVENEHLNLDIATLKQYFPVSLVLSGIFKISQDLFGLRFEEVTDAETWHCDVRLFSVFDLTSGELIGYFYLDLYTRVGKYNHTCVVALQNSALLPNGAHQISVPLLLAQFHKDVKGGHSVLLRFSEVVNLFHEFGHVVQHICNRASFTRFSGLRVDPDFVEIPSQMLENWCYESSSLKLLSGFHQDITKPVKDEICESLKRWRCSFSALKLKQEILYCLFDQIIHSAENIDIVELFKQLHPKVMLGLPMLEGTNPASCFPRSAIGYEAACYSGIWSEAFAADLFASKFRDGLLNQYVGMQFRNKVLAPGGSKEPIEVLSDFLGREPSVQAFIDLKTECSL 705
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 7255450 7264308 - Conep08aG0074300.1 Cone8ag0720 443269

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag0720 705 Coils Coil 186 213 - -
Cone8ag0720 705 CDD M3A_TOP 65 698 - -
Cone8ag0720 705 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 49 698 - -
Cone8ag0720 705 PANTHER PROTEASE M3 THIMET OLIGOPEPTIDASE-RELATED 45 701 IPR045090 GO:0004222(PANTHER)|GO:0004222(InterPro)|GO:0006508(PANTHER)|GO:0006508(InterPro)|GO:0006518(PANTHER)
Cone8ag0720 705 Pfam Peptidase family M3 257 698 IPR001567 GO:0004222(InterPro)|GO:0006508(InterPro)
Cone8ag0720 705 Coils Coil 332 352 - -
Cone8ag0720 705 Gene3D Neurolysin, domain 3 190 697 IPR024077 -
Cone8ag0720 705 FunFam Thimet oligopeptidase 1 39 180 - -
Cone8ag0720 705 FunFam Probable thimet oligopeptidase 384 535 - -
Cone8ag0720 705 Gene3D Collagenase (Catalytic Domain) 384 535 IPR024079 GO:0008237(InterPro)
Cone8ag0720 705 Gene3D Endopeptidase. Chain P; domain 1 35 180 IPR024080 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag0720 K01392 - - csv:101203244 1061.98
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag1099 Cone-Chr1:55459969 Cone8ag0720 Cone-Chr8:7255450 4.68E-59 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g1134 Blo01g00374 . Bda01g02194 . Bpe13g00518 . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone8ag0720 . . . . . . . . . . . Bma01g00026 . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0011877 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30