Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag0722 ATGAACCTTCTCCGAGGAACAAAGCATGGAAGTGGATTTTCAAGAACCTTTTCAACCTCCCCCCCTTCACCGCTCACTTCCTTAACCAGCTCTCTGGTTTTTCGGGCGCCTTCATCCTTAGTCTTAACTGCCGAACTAACCAAATCCAATACCCCACAACGTTCCGAAGAATGGTTTTCACTTCGTCGTAACAAACTAACCACAAGCACATTTAGCACGGCCCTAGGGTTTTGGAAAGGACAACGTCGGTTCGAGCTCTGGCAAGAAAAAGTATATGGTTCCGAGGCTCAAACCATTGAAGGTTCAAAGAGGTTTGCTATGAATTGGGGGGTGCTCAATGAATCAGCCGCAATTGATCGTTACAAAACCATAACGGGCCAAGATGTGAGCTTGTTGGGCTTTGCTACTCATTCCGAGGAGCAGTTTCATTGGCTTGGTGCATCGCCTGATGGACTTCTGGGTTGTTTCCCTGGAGGAGGGATACTAGAAGTTAAATGCCCGTATAATAAGGGCAAGCCGGAAATGGGTTTGCCTTGGTCGACTATGCCTTTCTATTACATGCCTCAAGTGCAAGGTCAAATGGAAATAATGGACCGGGAATGGGTTGACTTGTATTGTTGGACACCAAATGGGAGCACAGTTTTTCGGGTGTGGAGGGCACGTGGTTATTGGGAGATTATTTATCGAATTTTACAGGAATTTTGGTGGGAAAATGTTGTCCCAGCAAGGGAGGCCTTATCATTGGGGAGAGAGGAGGAGGCTTTATCATACAAACCGGAATCTACACATAAACAAACCGGACTTGCAATTGCTAAGAGCATTGAGTTGGCTGGTGAAGCGAAATTGTTTTGTAGAGAGATTGCGGGTCATGTAGAGTTTTTTAGATGA 888 45.95 MNLLRGTKHGSGFSRTFSTSPPSPLTSLTSSLVFRAPSSLVLTAELTKSNTPQRSEEWFSLRRNKLTTSTFSTALGFWKGQRRFELWQEKVYGSEAQTIEGSKRFAMNWGVLNESAAIDRYKTITGQDVSLLGFATHSEEQFHWLGASPDGLLGCFPGGGILEVKCPYNKGKPEMGLPWSTMPFYYMPQVQGQMEIMDREWVDLYCWTPNGSTVFRVWRARGYWEIIYRILQEFWWENVVPAREALSLGREEEALSYKPESTHKQTGLAIAKSIELAGEAKLFCREIAGHVEFFR 295
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 7273751 7275888 - Conep08aG0074500.1 Cone8ag0722 443271

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag0722 295 Pfam YqaJ-like viral recombinase domain 57 197 IPR019080 -
Cone8ag0722 295 PANTHER EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN 21 292 IPR051703 -
Cone8ag0722 295 CDD PDDEXK_lambda_exonuclease-like 53 235 - -
Cone8ag0722 295 MobiDBLite consensus disorder prediction 7 24 - -
Cone8ag0722 295 SUPERFAMILY Restriction endonuclease-like 49 247 IPR011335 -
Cone8ag0722 295 Gene3D - 37 242 IPR011604 -
Cone8ag0722 295 NCBIfam putative phage-type endonuclease 52 208 IPR017482 -
Cone8ag0722 295 MobiDBLite consensus disorder prediction 1 24 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag0722 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone19ag0955 Cone-Chr19:7271689 Cone8ag0722 Cone-Chr8:7273751 4.32E-54 transposed
Cone12ag0695 Cone-Chr12:6365563 Cone8ag0722 Cone-Chr8:7273751 2.77E-201 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g1138 Blo01g00373 . Bda01g02192 . Bpe13g00520 . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone8ag0722 . . . . . . . . . . . Bma01g00024 . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010567 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 0 1 1 2 1 1 32