Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag0723 ATGGGTGCGATAAAGGCAGCAGTAGGAGATGCAGTGCTAACATCCATGTGGGTCTTTTGTGCATCAACACTTGGGGCACTCACCTCTGTTATTTCCACTGCCCTCGGAGTTAATGCCCTCCCTCTTGTTTCCCTTTTCATCACAACGGTTCTTGTTTTCCTTCTTGTGTTCATCTTCACCATCATTGGGAATGCCTTGGGTGGGGCCAGCTTCAACCCCACCGGGATTGCCTCTTTCTATGCTGCTGGGATAGGATCCGACTCTCTTTTCTCTATGGCCCTTCGCTTTCCAGCTCAGGCAGCGGGTGCTGTAGGAGGCGCTCTAGCAATCAAGGAGGTCATGCCGCAACAATTCAAGCACATGCTTGGTGGGCCCTCCCTCAAAGTAAACCTTCACACCGGAGCCATAGCAGAGGGGGTGTTGACCTTTCTAATCACCTTCCTTGTCCTCCTTATCGTACTACGTGGGCCCCGCAACCCACTACTCAAGACATGGTTCCTGGCTGTATCCACCGTCTCATTGATCGTTGCTGGGTCCAGTTTCACCGGGCCTTCCATGAACCCTGCAAACGCATTTGGATGGGCTTATGTGAACAACTGGCACAATACATGGGAGCAGTTTTATGTCTATTGGATCTGCCCCTTTGCTGGAGCAATAGTGGCTGCTTGGGTTTTTCGTGCTATCTTTCCCCCAGCTCCGGCAAAACAGAAGAAAGCGTAA 720 51.53 MGAIKAAVGDAVLTSMWVFCASTLGALTSVISTALGVNALPLVSLFITTVLVFLLVFIFTIIGNALGGASFNPTGIASFYAAGIGSDSLFSMALRFPAQAAGAVGGALAIKEVMPQQFKHMLGGPSLKVNLHTGAIAEGVLTFLITFLVLLIVLRGPRNPLLKTWFLAVSTVSLIVAGSSFTGPSMNPANAFGWAYVNNWHNTWEQFYVYWICPFAGAIVAAWVFRAIFPPAPAKQKKA 239
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 7278339 7280738 + Conep08aG0074600.1 Cone8ag0723 443272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag0723 239 FunFam Aquaporin SIP1-1 1 239 - -
Cone8ag0723 239 Pfam Major intrinsic protein 4 225 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone8ag0723 239 Gene3D Glycerol uptake facilitator protein. 2 238 IPR023271 -
Cone8ag0723 239 PRINTS Major intrinsic protein family signature 52 76 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone8ag0723 239 PRINTS Major intrinsic protein family signature 137 155 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone8ag0723 239 PRINTS Major intrinsic protein family signature 5 24 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone8ag0723 239 PRINTS Major intrinsic protein family signature 91 110 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone8ag0723 239 PRINTS Major intrinsic protein family signature 168 190 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone8ag0723 239 PRINTS Major intrinsic protein family signature 208 228 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone8ag0723 239 PANTHER AQUAPORIN SIP1-1 1 237 IPR044222 GO:0015250(InterPro)
Cone8ag0723 239 SUPERFAMILY Aquaporin-like 4 231 IPR023271 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0433 Cone-Chr13:3995528 Cone8ag0723 Cone-Chr8:7278339 6.65E-37 dispersed
Cone12ag0033 Cone-Chr12:231079 Cone8ag0723 Cone-Chr8:7278339 2.22E-110 transposed
Cone12ag0696 Cone-Chr12:6370067 Cone8ag0723 Cone-Chr8:7278339 6.22E-152 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag0723 K09875 - mdm:103420949 364.77