Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag0724 ATGTATTTATCCGATAAGCCCCGACCGATCGACTTCTACAAAGAAGAAGAAGACACTCGCGATATGATGATTGAGGTCGTCTCTAATGGCGCCGTAACCGCCGCCGGAGGAGGAGGCGGATGCGGCGCCGGAGGAGGAGTCCACCACTCTCACCCTCAGCAGCCTCAGCCTCCTCAACCTCAGCATCAAATACACCAAATGATTCTCGGCGAAAGCAGCGGCGAAGATCACGAGGTTAAAGCTCCGAAGAAGAGAGCGGAGACGTGGGTTCAAGACGAGACTAGGAGCTTGATTTCGCTCCGGAGAGAAATGGACGGTCTGTTCAACACCTCTAAATCTAACAAGCATTTGTGGGAACAGATTTCGGCTAAGATGAGGGAAAAGGGGTTTGATCGCTCGCCGACTATGTGTACTGATAAATGGAGGAATTTGCTTAAGGAGTTCAAGAAAGCCAAGCATCAGGATAGAGGAGGAAGTGGGTCTGCTAAGATGTCTTATTACAAGGAGATTGAGGAGATTTTGAGGGAGAGGAGTAAGAATTCGCAGTACAAGAGCCCTACTCCTCCTCCCAAGGTTGATTCCTACATGCAATTCTCGGACAAAGGACTTGAGGATAATGGAATTTCTTTTGGACCCGTGGAAGCTACTGGTAGACCAACATTGAATCTTGAAAGACATTTAGATCATGATGGGCACCCTCTCGCCATCACTACAGCAGAGGCAGTTGCAGCGAATGGAGTACCCCCTTGGAACTGGAGAGAAGCCCCTGGAAATGGCGAAGAGAATCATGCATTCGGCGGGAGAGTCATAACGGTCAAATGGGGGGAATACACTAGGAGGATCGGGATTGATGGGTCCTCAGATGCCATCAAGGAGGCAATTAGGTCTGCGTTTCGGTTGAGAACTAAGCGAGCCTTTTGGTTGGAAGATGACGATCAAATAGTCCGGAGTCTTGACAGAGACATGCCTTTGGGGAATTACACTCTTCAACTTGATGAAGGGTTAGCCATAAAATTATGCCTCTATGATGAGTCGGACCACTTACCGGTCCACACAGAAGAGAAGATATTTTACATGGAAGATGATTACAGAGATTTCTTGAACCGTCGAGGTTGGACATGTCTTAGAGAGTTTGATGGGTACAGAAACATTGATAACATGGACGATCTTCGCCCTGGTGCTCCATACCGTGGTATGACGTGA 1203 48.38 MYLSDKPRPIDFYKEEEDTRDMMIEVVSNGAVTAAGGGGGCGAGGGVHHSHPQQPQPPQPQHQIHQMILGESSGEDHEVKAPKKRAETWVQDETRSLISLRREMDGLFNTSKSNKHLWEQISAKMREKGFDRSPTMCTDKWRNLLKEFKKAKHQDRGGSGSAKMSYYKEIEEILRERSKNSQYKSPTPPPKVDSYMQFSDKGLEDNGISFGPVEATGRPTLNLERHLDHDGHPLAITTAEAVAANGVPPWNWREAPGNGEENHAFGGRVITVKWGEYTRRIGIDGSSDAIKEAIRSAFRLRTKRAFWLEDDDQIVRSLDRDMPLGNYTLQLDEGLAIKLCLYDESDHLPVHTEEKIFYMEDDYRDFLNRRGWTCLREFDGYRNIDNMDDLRPGAPYRGMT 400
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 7286476 7291685 + Conep08aG0074700.1 Cone8ag0724 443273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag0724 400 MobiDBLite consensus disorder prediction 32 87 - -
Cone8ag0724 400 MobiDBLite consensus disorder prediction 71 87 - -
Cone8ag0724 400 Gene3D - 89 151 - -
Cone8ag0724 400 Pfam Myb/SANT-like DNA-binding domain 88 173 IPR044822 -
Cone8ag0724 400 SMART sant 85 147 IPR001005 -
Cone8ag0724 400 PANTHER FI21293P1 53 391 - -
Cone8ag0724 400 CDD GT1 87 152 - -
Cone8ag0724 400 ProSiteProfiles Myb-like domain profile. 81 145 IPR001005 -
Cone8ag0724 400 FunFam trihelix transcription factor GT-1 89 151 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0697 Cone-Chr12:6387898 Cone8ag0724 Cone-Chr8:7286476 1.76E-275 wgd
Cone16ag0970 Cone-Chr16:9673740 Cone8ag0724 Cone-Chr8:7286476 3.52E-169 wgd
Cone2ag0062 Cone-Chr2:301526 Cone8ag0724 Cone-Chr8:7286476 3.94E-66 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
46672 PF02181 FH2 4.40E-116 No_clan Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag0724 - - - 0.0