Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag0738 ATGGTTCTTGGGATAAAAACAAAGAGTCGAAAATATGTCCCAATTCAGGTCGACTACCTCATCACCATACAGGAGCTTAAGCCATGGCCACCTTCAGATTCTCTAAAATCAATCTCATCTGTATTGCTTCAATGGGAAGATGGTGATGGAAGTTCCGGGTTCTCTGTTTCAAGCATTGGAGATGAAAAGATCGAATTTGGCGAGACTTTCAGGCTTCCTATAACATTATTCAGAGAAACATCCAAAAAAGGCACAATCCGAGACAATTTTCAGAAGAACTGCTTAGAGTTCACCTTGTCTGAATTTCTAAAGGAGAAGGCCGGGAAGGGACAACTCTTAGGATCAGCTGTTGTAAATCTTGCTGATTACGGAATTATTAAGGACACAATAACTTTAAGCACTCCAGTTAACTGCAAGAAGAGTTCTAAGAATTCAGCTCAACCTGTTCTTTATGCTGATATTCAGCTATTTGATAAGGATAGCCTTAGCTCATCACCAGGGGGAAGCTTCCTGGAGAAATATGAAAGTGAATCTATTTCAGGATTGACAAATGATGAGGAATCTGAGAGTGCATCTTATACCGATCATGATGATTCTTCCTCACATTCTTCACAAACGTTCCCCTCTAATTTTCTTGAGGCTGAAAGAAGTTCAACTGATACTTATAAGAAAGGAAGGGAATCAGGTAGGAACAGTGCAGAGAAAGTCAATGGCGAACACGTCATATCCTTAGGAGCATTGTTAACAAACCCAAACGCAACTCAATTACCTGAAGCATTTAAGCATCCAAATGGGAGTTCAAATATTGCAAACCTTTCTGACTCTAAAGTCATTCTTGGAGCTAGCATACGAAATTGGAGACCGGCAAAAGAAGACCATGACAATTACATGCCCAGTACATCAGTTGTTGGGATTGTTGAGGATAGATATAAAAAGGAGTTGCGAGAAGATGGAAACAAAGAAACAGAATTTGAAGTGAAGAGAGATTTTACAGATGAAAAATTCACTAATAAATTTCCACAAGATGCCGTCGGAAAACAAGTTAAATTGAGGAGCGATACTCTTGCTAGGAGTACCCTTGCAATGCAGGGAAATCTCCCAAAGAATGATAAGTTAAAGCATTTGAAGTCTCTTCAGACAAATTTTGACGCTTCCAAGATCAATGATATGTTTATCAGTAATCAGGCTGATAACAAGGCAAAGAAAGTTGACATCTCAAAAAATAATGGTGATGTGAGTATTAGAGACCAGGAAAAGAAAATTGAAGTTGCTAGTAAGAGTACTTCAAGTCATGTGAGTAGTGTAAACAGGGATACAAAAGAGGAATTTTCTGAAAGAAACATTGGATTAGAGTCACAAGTTCAATTGCTTAAGGAGGAGCTCAGGGAAGTAGCTGCACTTGAGGTTTCACTTTATTCAATTGTTGCTGAGCATGGGAGTTCTGCAAATAAGGTCCATGCTTCAGCTAGGCGACTTTCTAGGTTCTATTTACATGCATCCAAAATAAAGTCTCCTGTTACAAGGGCAAGTGCAGCAAGGACTGTTGTTTCAGGATTAGTTTTGGTATCTAAATCGTGTGGAAATGACGTTCCAAGATTGACTTTCTGGTTCTCAAATGTAATTTTGTTGAGAGCAATTGTCAGTCAGAGTGCTTCTAAAGTGCAGCTCACTTCTAGAAAAAAGGTCAAAAGTGTTGCAACAGAAAGTTGCGATGACTGGGAGGATGCACAAGGCCTTGTACTAGCATTAGAGAAGGTTGAAGCTTGGATTTTTTCTCGAATCGTTGAGTCAGTGTGGTGGCAGACTTTGACTCCGTACATGCAGTCTGCTGCTTCAAAGGGCTCAAGCTCGAGGAAAACCCAAGGAAAGAGACATAGTTTAGGCAATCAACAGCAGGGAAACTTTTCTATAGATCTTTGGAAAAAGGCTTTCAAGGATGCCAGTGAAAGGCTTTGTCCTCTTCGGGCTGGAGGACATAAGTGTGGCTGCTTGCCTATAACGGCTAGATTGGTGGTAAAACAATTGGTAAATAGACTTGATGTTGCAATGTTTAATGCTATTCTACGAGAATCATATGAAGAGATGCCCACAGATCCTGTTTCTGACCCTATCAGTGATCGTAAGGTTCTTCCTGTTCCAGCTGGGAAATCAAGCTTTGGAGCCGGTGCTCAACTAAAAAATGCTGTTGGGAACTGGTCGAGATCGCTCACCGGTTTATTTGGCATTGATGATGGGAATGAATGTGATGATGTTGGCAATAAACCAGACTCTGAGGCATCCTTCAGGGCTTTTGGTCTCCTTAATGCCTTGAGTGGTCTAATGATGCTTCCGCTTGAAATGCTTGCAGAAAGGTCCATAAGGAGAGAGGTATGCCCTGTTTTTGGTGTGCAAGTGATCAAGAGAGTTCTTTATAATTTTGTACCGGACGAGTTCTCACCTAATCCAATTCCAGAGTCTCTTCTTAAGGCTCTTGATTCTGAGAACCTTAATGAGACCGGGGAAGATCCTATTGCAAGCTTTCCATGCTTAGCTTCTCCTATGATTTATTCACCTCCACCATCATCATCACTTACAAACATCATAGGCGAGCTTGGAAGTCAACAAACTCTACATTTTCCAACAAACGGATCATCGCTACTAAGAAAATCATACACAAGTGATGACGAGCTTGATGAGTTAGATTCATCCATAAGCAGGATTTTTGTAGACAAATCTCGGGTTTCTCCCTCTTCTGCAGATTCCAATTTGCTTCTGAAGGGTAAAGGAGGTAGGAACGTTGTCAGATATCAACTTTTGCGGGAACTATGGCAGGACGGGGAATAA 2823 40.81 MVLGIKTKSRKYVPIQVDYLITIQELKPWPPSDSLKSISSVLLQWEDGDGSSGFSVSSIGDEKIEFGETFRLPITLFRETSKKGTIRDNFQKNCLEFTLSEFLKEKAGKGQLLGSAVVNLADYGIIKDTITLSTPVNCKKSSKNSAQPVLYADIQLFDKDSLSSSPGGSFLEKYESESISGLTNDEESESASYTDHDDSSSHSSQTFPSNFLEAERSSTDTYKKGRESGRNSAEKVNGEHVISLGALLTNPNATQLPEAFKHPNGSSNIANLSDSKVILGASIRNWRPAKEDHDNYMPSTSVVGIVEDRYKKELREDGNKETEFEVKRDFTDEKFTNKFPQDAVGKQVKLRSDTLARSTLAMQGNLPKNDKLKHLKSLQTNFDASKINDMFISNQADNKAKKVDISKNNGDVSIRDQEKKIEVASKSTSSHVSSVNRDTKEEFSERNIGLESQVQLLKEELREVAALEVSLYSIVAEHGSSANKVHASARRLSRFYLHASKIKSPVTRASAARTVVSGLVLVSKSCGNDVPRLTFWFSNVILLRAIVSQSASKVQLTSRKKVKSVATESCDDWEDAQGLVLALEKVEAWIFSRIVESVWWQTLTPYMQSAASKGSSSRKTQGKRHSLGNQQQGNFSIDLWKKAFKDASERLCPLRAGGHKCGCLPITARLVVKQLVNRLDVAMFNAILRESYEEMPTDPVSDPISDRKVLPVPAGKSSFGAGAQLKNAVGNWSRSLTGLFGIDDGNECDDVGNKPDSEASFRAFGLLNALSGLMMLPLEMLAERSIRREVCPVFGVQVIKRVLYNFVPDEFSPNPIPESLLKALDSENLNETGEDPIASFPCLASPMIYSPPPSSSLTNIIGELGSQQTLHFPTNGSSLLRKSYTSDDELDELDSSISRIFVDKSRVSPSSADSNLLLKGKGGRNVVRYQLLRELWQDGE 940
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 7446774 7451567 + Conep08aG0076200.1 Cone8ag0738 443287

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag0738 940 Coils Coil 440 460 - -
Cone8ag0738 940 MobiDBLite consensus disorder prediction 175 235 - -
Cone8ag0738 940 ProSiteProfiles C2 NT-type domain profile. 7 158 IPR019448 -
Cone8ag0738 940 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 15 143 IPR019448 -
Cone8ag0738 940 MobiDBLite consensus disorder prediction 217 234 - -
Cone8ag0738 940 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 14 939 IPR021827 GO:0005643(InterPro)
Cone8ag0738 940 MobiDBLite consensus disorder prediction 197 216 - -
Cone8ag0738 940 MobiDBLite consensus disorder prediction 611 630 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag0738 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone19ag0504 Cone-Chr19:4156559 Cone8ag0738 Cone-Chr8:7446774 4.66E-148 dispersed
Cone11ag0061 Cone-Chr11:264679 Cone8ag0738 Cone-Chr8:7446774 9.39E-227 wgd
Cone12ag0711 Cone-Chr12:6532771 Cone8ag0738 Cone-Chr8:7446774 0 wgd
Cone18ag1419 Cone-Chr18:9615814 Cone8ag0738 Cone-Chr8:7446774 3.65E-227 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g1175 Blo01g00367 . Bda01g02185 . Bpe13g00526 . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone8ag0738 . . . . . . . . . . . Bma01g00019 . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0016656 1 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 1 7