Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag0754 ATGGCTTCTGCTTATGCAGCCTCCTCTTCTATTGCCGCTGTTGCTGTTTCCAATTCTCTCAGCTCCCAAAAGGGTTCTAATTTCCTTGCTGGGAGGAAGTTAAGTGTGAGAAAGCTCAAGGCAGCTAGTAGCTCATCTGGGGGGAGAGTAGTAGGACCGCTTTGTGCGGCAGCTGACCCTTCGGAGAGGCCACTCTGGTTCCCCGGAAGCACCCCTCCTCCTTGGCTCGACGGGTCCCTTCCCGGTGACTTTGGTTTTGACCCCCTTGGTCTTGGATCTGACCCTGAAAGCTTGAGATGGAACCAGCAAGCAGAGATAGTGCATTGCAGATGGGCAATGTTAGGAGCTGCCGGTATTTTCATCCCGGAATTCCTAACCAAGATTGGAATCCTCAACACCCCTTCATGGTACACGGCTGGGGAGCTAGATTACTTCACTGATACAACCACCCTCTTTGTAATTGAGTTGATTTTGATCGGGTGGGCCGAAGGGAGAAGATGGGCCGACATTCTTAAGCCTGGGAGTGTCAACACGGACCCCATTTTCCCAAACAACAAGCTCACTGGGACCGATGTCGGGTACCCGGGTGGGCTTTGGTTTGATCCCCTTGGGTGGGGGAGTGGGTCCCCTGAGAAGATTAAGGATTTGAGAACAAAGGAGATCAAGAATGGTAGATTAGCTATGTTGGCTGTGATGGGTGCTTGGTTCCAACATATCTACACCGGAACCGGTCCGATTGATAACCTCTTTGCCCACCTTGCGGATCCGGGTCATGCTACCATTTTTGCTTCTTTTACTCCCAAGTGA 807 51.67 MASAYAASSSIAAVAVSNSLSSQKGSNFLAGRKLSVRKLKAASSSSGGRVVGPLCAAADPSERPLWFPGSTPPPWLDGSLPGDFGFDPLGLGSDPESLRWNQQAEIVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELDYFTDTTTLFVIELILIGWAEGRRWADILKPGSVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKDLRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFASFTPK 268
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 7634588 7636656 + Conep08aG0077900.1 Cone8ag0754 443303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag0754 268 Gene3D Chlorophyll a/b binding protein domain 73 258 - -
Cone8ag0754 268 SUPERFAMILY Chlorophyll a-b binding protein 56 266 - -
Cone8ag0754 268 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 7 263 IPR001344 GO:0009416(PANTHER)|GO:0009535(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0016020(InterPro)
Cone8ag0754 268 Pfam Chlorophyll A-B binding protein 72 238 IPR022796 -
Cone8ag0754 268 FunFam Chlorophyll a-b binding protein, chloroplastic 73 258 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0367 Cone-Chr13:3363953 Cone8ag0754 Cone-Chr8:7634588 2.14E-168 dispersed
Cone16ag0175 Cone-Chr16:1117713 Cone8ag0754 Cone-Chr8:7634588 1.10E-74 dispersed
Cone2ag0840 Cone-Chr2:34403965 Cone8ag0754 Cone-Chr8:7634588 9.24E-74 dispersed
Cone4ag0830 Cone-Chr4:5333628 Cone8ag0754 Cone-Chr8:7634588 2.49E-106 dispersed
Cone4ag1571 Cone-Chr4:12047915 Cone8ag0754 Cone-Chr8:7634588 3.18E-33 dispersed
Cone5ag0333 Cone-Chr5:1408962 Cone8ag0754 Cone-Chr8:7634588 1.25E-46 dispersed
Cone7ag1381 Cone-Chr7:9960799 Cone8ag0754 Cone-Chr8:7634588 8.47E-62 dispersed
Cone8ag0754 Cone-Chr8:7634588 Cone8ag1383 Cone-Chr8:10959263 4.41E-39 dispersed
Cone12ag0808 Cone-Chr12:7362530 Cone8ag0754 Cone-Chr8:7634588 3.75E-197 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag0754 K08908 - csv:101214055 468.003