Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag0764 ATGGAGGGAGGAACAGCTCAGCCTGACGACACCGTTATGTCAGAGGCGGCGCCGCCTCCACCACCGGCTCAATCCGATCCTCAGGGGCACCAGCATCAGCAGCAGGTCCCCAACGGGATGGAGAGCATTCCGGCGACTCTCAGCCACGGCGGAAGGTTTATTCAGTACAATATATTCGGAAACATCTTTGAAGTCACGGCCAAGTACAAGCCTCCTATCTTGCCTATCGGAAAAGGCGCTTACGGCATAGTCTGCTCTGCTGTGAACTCGGACACGAACGAGCACGTGGCGCTTAAGAAGATTGCCAATGCGTTTGACAATAAGATAGACGCTAAGAGGACTCTTCGCGAGATCAAGCTGCTCCGGCACATGGATCATGAAAACGTTGTTGCGATCAGGGATATTATACCACCACCCCAAAGGGAGACATTTAATGACGTGTACATAGCATATGAGCTTATGGACACTGACCTGCATCAAATTATTCGTTCTAATCAGGCATTATCTGAGGAGCACTGTCAGTACTTCCTGTATCAGATTCTCCGTGGATTGAAGTACATACATTCAGCAAATGTCCTGCACAGGGATTTAAAACCTTCTAATCTGCTACTGAATGCCAACTGTGACTTAAAGATATGTGATTTTGGACTTGCTCGTGTTACCTCAGAAACTGATTTCATGACGGAATATGTTGTCACAAGATGGTACCGTGCACCAGAGCTACTATTGAACTCATCAGATTACACTGCAGCTATTGATGTATGGTCTGTTGGCTGTATTTTCATGGAACTGATGGATCGGAAGCCCTTATTTCCTGGCAGAGATCATGTGCATCAGCTGCGTTTGCTTATGGAGCTTATTGGCACCCCATCAGAGGCTGATCTTGGGTTTTTGAATGAAAATGCTAAGAGATACATTCGCCAACTTCCTCTTTACCATCCCCATTCCTTAACTGAAAAGTTTCCACATGTCCATCCTGCAGCTATTGATCTTGTTGAGAAAATGTTGACATTCGATCCCAGGAAGAGACTTACTGTTGAAGAAGCTCTTGCTCATCCCTACCTGAATTCATTGCATGACATAAGCGACGAGCCCGTGTGCACGATGCCTTTCAGCTTTGACTTTGAGCAGCATGCTCTGACCGAGGAGCAGATGAAGGAGCTGATATATCGAGAGGCACTTGCATTTAATCCCGAGTATCAACATTAG 1209 46.73 MEGGTAQPDDTVMSEAAPPPPPAQSDPQGHQHQQQVPNGMESIPATLSHGGRFIQYNIFGNIFEVTAKYKPPILPIGKGAYGIVCSAVNSDTNEHVALKKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDIIPPPQRETFNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARVTSETDFMTEYVVTRWYRAPELLLNSSDYTAAIDVWSVGCIFMELMDRKPLFPGRDHVHQLRLLMELIGTPSEADLGFLNENAKRYIRQLPLYHPHSLTEKFPHVHPAAIDLVEKMLTFDPRKRLTVEEALAHPYLNSLHDISDEPVCTMPFSFDFEQHALTEEQMKELIYREALAFNPEYQH 402
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 7689117 7693925 + Conep08aG0079000.1 Cone8ag0764 443313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag0764 402 Gene3D Transferase(Phosphotransferase) domain 1 154 382 - -
Cone8ag0764 402 ProSiteProfiles Protein kinase domain profile. 70 355 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone8ag0764 402 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone8ag0764 402 MobiDBLite consensus disorder prediction 1 36 - -
Cone8ag0764 402 ProSitePatterns MAP kinase signature. 105 208 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone8ag0764 402 SUPERFAMILY Protein kinase-like (PK-like) 75 363 IPR011009 -
Cone8ag0764 402 SMART serkin_6 70 355 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone8ag0764 402 Gene3D Phosphorylase Kinase; domain 1 53 392 - -
Cone8ag0764 402 ProSitePatterns Protein kinases ATP-binding region signature. 76 99 IPR017441 GO:0005524(InterPro)
Cone8ag0764 402 Pfam Protein kinase domain 76 355 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone8ag0764 402 FunFam Mitogen-activated protein kinase 55 164 - -
Cone8ag0764 402 CDD STKc_TEY_MAPK 63 398 - -
Cone8ag0764 402 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 63 393 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Cone8ag0764 402 FunFam Mitogen-activated protein kinase 154 382 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone3ag1494 Cone-Chr3:33561670 Cone8ag0764 Cone-Chr8:7689117 1.19E-112 dispersed
Cone5ag1201 Cone-Chr5:5436270 Cone8ag0764 Cone-Chr8:7689117 1.19E-214 dispersed
Cone5ag1650 Cone-Chr5:11697072 Cone8ag0764 Cone-Chr8:7689117 4.84E-51 dispersed
Cone6ag0803 Cone-Chr6:4083500 Cone8ag0764 Cone-Chr8:7689117 3.64E-193 dispersed
Cone8ag0281 Cone-Chr8:1625057 Cone8ag0764 Cone-Chr8:7689117 1.91E-202 dispersed
Cone8ag0526 Cone-Chr8:3792873 Cone8ag0764 Cone-Chr8:7689117 4.16E-53 dispersed
Cone8ag0764 Cone-Chr8:7689117 Cone9ag0801 Cone-Chr9:3846444 6.41E-192 dispersed
Cone12ag0799 Cone-Chr12:7308159 Cone8ag0764 Cone-Chr8:7689117 1.15E-280 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83120 None None None None Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag0764 K14512 - csv:101204301 743.806