Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone8ag0792 | ATGAATTCGTCATCCACCCAATTTGTTTCCTCAAGAAGAATGGAAGTTTATGAACCAATCCACCAGTTTGGCATGTGGGAAGAAAACTTCAAATGTAATAGTAATATGCACACATCTGGAACCCTGATCATGGAGGCAGACACAAAACTAGATGATCATTCAGATAATGCTTCACTGGGGTCAATGGGACTTCCTCACAAATATGAGCAAGAAGCAACAAGACCAAATGATAAGACACTAAGAAGGCTTGCACAAAACCGGGAGGCAGCTCGTAAAAGCCGCCAGCGGAAAAAGGCCTATGTTCAGCAATTAGAAAAAAGTCGCTTGAAGCTGGTTCAATTAGAGCAGGAGCTTGAGAAAGCAAGACAACAAGGTCTTTATGCTGGTGGTGGTGCATTTGATGTTAATCAGATGGGATTCTCTGGAGCAGTAAATTCAGGTGTGACCACATTTGAGATGGAGTATAGACATTGGGTGGAAGAGCAAAACAGTCAGATCAGCGAGCTGAGAACTGCTTTACGTGCTGATATATCTGACAGGGAGCTTGAAATGCTTGTGAAAAGTTGTTTGGATCATTATATTGATCTTTTCCGAATGAAAGCAATAGCTGCAAAATCCGACGTCTTTTATGTATTATATGGAATGTGGAAAACACCAGTCGAAAGATTTTTCTTCTGGATTGGAGGATTTCGCCCTTCAGAGATCCTTAAGGTTCTTGAGCCTCAGCTTGAAACATTGACCAACCAACAGCATATGGATGTCATAAAACTTACAGATTCATGTCAGCAAGCAGAAGACGCTCTCCGGCAAGGTATGGAGAAACTCCAGCAAACCCTAACTGATAGTGTAGTGGCTGGTCGGCTTGGTGATGGAAGTTATCCCATTCAGATGTCTACTGCAATGGAGAGGCTAGAAAATCTGGTCAGCTTTGTAAATCAGGCGGACTACCTCAGACAGGAAACACTGCAACAGATGAAGAAAATTTTATCTATACGGCAATCAGCCCATGGCTTGCTAGTACTGGGGGACTACTTCCATAGACTCAGAGCCTTCAGCTTGGTTTGGGCTAATTGTTCAGGTGAGCCTGCCTAG | 1092 | 43.22 | MNSSSTQFVSSRRMEVYEPIHQFGMWEENFKCNSNMHTSGTLIMEADTKLDDHSDNASLGSMGLPHKYEQEATRPNDKTLRRLAQNREAARKSRQRKKAYVQQLEKSRLKLVQLEQELEKARQQGLYAGGGAFDVNQMGFSGAVNSGVTTFEMEYRHWVEEQNSQISELRTALRADISDRELEMLVKSCLDHYIDLFRMKAIAAKSDVFYVLYGMWKTPVERFFFWIGGFRPSEILKVLEPQLETLTNQQHMDVIKLTDSCQQAEDALRQGMEKLQQTLTDSVVAGRLGDGSYPIQMSTAMERLENLVSFVNQADYLRQETLQQMKKILSIRQSAHGLLVLGDYFHRLRAFSLVWANCSGEPA | 363 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 7958365 | 7961224 | + | Conep08aG0081800.1 | Cone8ag0792 | 443341 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone8ag0792 | 363 | CDD | bZIP_HBP1b-like | 78 | 130 | - | - | |
Cone8ag0792 | 363 | SUPERFAMILY | Leucine zipper domain | 78 | 119 | IPR046347 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone8ag0792 | 363 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 76 | 120 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone8ag0792 | 363 | SMART | brlzneu | 74 | 157 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone8ag0792 | 363 | Coils | Coil | 97 | 124 | - | - | |
Cone8ag0792 | 363 | Pfam | bZIP transcription factor | 77 | 120 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone8ag0792 | 363 | MobiDBLite | consensus disorder prediction | 53 | 79 | - | - | |
Cone8ag0792 | 363 | Pfam | Seed dormancy control | 165 | 240 | IPR025422 | GO:0006351(InterPro)|GO:0043565(InterPro) | |
Cone8ag0792 | 363 | ProSiteProfiles | DOG1 domain profile. | 148 | 358 | IPR025422 | GO:0006351(InterPro)|GO:0043565(InterPro) | |
Cone8ag0792 | 363 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 81 | 96 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone8ag0792 | 363 | FunFam | BZIP family transcription factor | 77 | 126 | - | - | |
Cone8ag0792 | 363 | Gene3D | - | 77 | 126 | - | - | |
Cone8ag0792 | 363 | PANTHER | TRANSCRIPTION FACTOR TGA9 | 1 | 359 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone17ag1246 | Cone-Chr17:8978604 | Cone8ag0792 | Cone-Chr8:7958365 | 5.12E-106 | dispersed | |
Cone20ag0480 | Cone-Chr20:2568276 | Cone8ag0792 | Cone-Chr8:7958365 | 5.20E-108 | dispersed | |
Cone4ag1363 | Cone-Chr4:11088249 | Cone8ag0792 | Cone-Chr8:7958365 | 1.06E-88 | dispersed | |
Cone5ag1347 | Cone-Chr5:8085681 | Cone8ag0792 | Cone-Chr8:7958365 | 2.25E-82 | dispersed | |
Cone12ag0745 | Cone-Chr12:6847559 | Cone8ag0792 | Cone-Chr8:7958365 | 8.72E-235 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
46675 | None | None | None | None | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone8ag0792 | K14431 | - | mdm:103416129 | 471.855 |