Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag0795 ATGTTGGGAGGAGGTGGAGGTGGCGGGTCGTCAGGGCGGATGCCGACATGGAAGGAGAGGGAGAACAATAAGAAGAGGGAAAGGAGGAGGAGAGCCATTGCTGCCAAGATTTACTCTGGTCTTAGAGGTCAGGGAAGCTACAAGCTTCCTAAACACTGCGACAATAACGAGGTCTTGAAGGCTCTCTGTTCTGAAGCTGGTTGGATCGTCGAAGACGATGGCACGACCTACCGCAAGGGATTCAAGCCATCTGCAGGCGATGTAGCGTGCCCGTCCATAAACATGAGCTCCTGTTCCTCCCTTCAACCAAGCCCACAATCATCATCCTTCCCAAGCCCCATTCCATCCTACCATGTCAGCCCATCTTCCTCCCCCTTCCACAGTCCAACCCATTTCGAAAACCCCTCCTCATACCTCCTCCCATTTCTCCGCAACATAGCCTCCATACCCAATAACCTCCCTCCTCTTAGAATATCAAATAGTGCACCTGTAACCCCTCCACTCTCTTCTCCCACCTCTAGAGGCTCAAAACGGAAGTCAGACTGGGACTCTCTAACCAACGGGTCCTTAACATCTTTCCGCCACCCCCTTTTTGCTGCATCAGCTCCTTCTAGCCCAACCAGACGGGCCCACCTCACCCCAGCCACGATCCCGGAATGTGATGAGTCTGATGCATCCACCGTGGACTCAGGTCGGTGGGTCAGCTTCCAGATGGTGGCGTCTGCAGGGGGGGCTGCACCGCCTTCGCCGACGTTTAATCTAATGAAACCGGTGAGTCATCAGGGTTTACACCAGGATGGGGTTGACCATGGTAGGGTTGGGCAGGGGATGACCGGAATGGGTGAGAGGGTACATGGGTCAGAGTTTGAGTTTGAGAGTGGAACAGTTAAGCCATGGGAAGGGGAGAGAATTCATGAGGTTGGCGTGGATGAATTGGAGCTAACTCTTGGAAGTGGGAAGACTCATTAG 969 53.77 MLGGGGGGGSSGRMPTWKERENNKKRERRRRAIAAKIYSGLRGQGSYKLPKHCDNNEVLKALCSEAGWIVEDDGTTYRKGFKPSAGDVACPSINMSSCSSLQPSPQSSSFPSPIPSYHVSPSSSPFHSPTHFENPSSYLLPFLRNIASIPNNLPPLRISNSAPVTPPLSSPTSRGSKRKSDWDSLTNGSLTSFRHPLFAASAPSSPTRRAHLTPATIPECDESDASTVDSGRWVSFQMVASAGGAAPPSPTFNLMKPVSHQGLHQDGVDHGRVGQGMTGMGERVHGSEFEFESGTVKPWEGERIHEVGVDELELTLGSGKTH 322
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 7987106 7989386 + Conep08aG0082100.1 Cone8ag0795 443344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag0795 322 MobiDBLite consensus disorder prediction 158 175 - -
Cone8ag0795 322 Pfam BES1/BZR1 plant transcription factor, N-terminal 10 133 IPR008540 -
Cone8ag0795 322 MobiDBLite consensus disorder prediction 158 187 - -
Cone8ag0795 322 MobiDBLite consensus disorder prediction 96 116 - -
Cone8ag0795 322 MobiDBLite consensus disorder prediction 1 30 - -
Cone8ag0795 322 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 11 322 IPR033264 GO:0003700(InterPro)|GO:0006351(InterPro)|GO:0009742(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag1892 Cone-Chr4:13494607 Cone8ag0795 Cone-Chr8:7987106 1.45E-90 dispersed
Cone8ag0795 Cone-Chr8:7987106 Cone9ag0944 Cone-Chr9:4662970 2.85E-45 dispersed
Cone12ag0761 Cone-Chr12:7015882 Cone8ag0795 Cone-Chr8:7987106 2.34E-151 wgd
Cone7ag1804 Cone-Chr7:11802434 Cone8ag0795 Cone-Chr8:7987106 4.75E-77 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
46677 PF01545 Cation_efflux 5.60E-47 No_clan Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag0795 K14503 - mdm:103401849 431.795