Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag0810 ATGTTGCCTCCGACCAAGTCATCATTTAAGATAATCTTGGGTTCTTCATCAATGGCTCGCAGACAAATTTTAGCCGAGATGGGGTATGAGTTCGCAATAATGACTGCAGATATTGATGAGAAAGCTATAAGGAAGGAAACGCCAGAAGAATTGGTTGTGGCCCTGGCTCATGCAAAGGCCGATGCCATTATACCAAAACTTCAAGCTTCTGGTCAGCTAGAGAGGGATTACCCTGTGACCTTGCTCATAACCGCAGACACAGTGGTAGTCTATGAAGGAGTAATCAGAGAAAAACCATCTGACGAGGAAGAAGCACGGGAATTCATCAAAGGTTACTCTGGCGGTCATGCATCAGTTGTAGGATCCATACTTGTAACAAATCTTACGACGGGAACCAAAAAAATGGGCTGGGACAAAGCAGAGGTTTATTTCTATGAGATACCGGAAGAAGTTATAGATAGCCTGATTGAGGAGGGAGTTCCTTTCAACGTTGCTGGCGGTCTAATGCTTGAACATCCACTCACATTGCCTTTTGTTGAAGCCGTGGTGGGTTCTACTGATACTGTGATGGGACTTCCAAAAGATCTATTGGAAGAACTCATAAGAGATGCCCTGTAA 618 44.34 MLPPTKSSFKIILGSSSMARRQILAEMGYEFAIMTADIDEKAIRKETPEELVVALAHAKADAIIPKLQASGQLERDYPVTLLITADTVVVYEGVIREKPSDEEEAREFIKGYSGGHASVVGSILVTNLTTGTKKMGWDKAEVYFYEIPEEVIDSLIEEGVPFNVAGGLMLEHPLTLPFVEAVVGSTDTVMGLPKDLLEELIRDAL 205
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 8143915 8146561 + Conep08aG0083600.1 Cone8ag0810 443359

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag0810 205 Hamap dTTP/UTP pyrophosphatase. 10 205 IPR003697 GO:0047429(InterPro)
Cone8ag0810 205 PANTHER BIFUNCTIONAL DTTP/UTP PYROPHOSPHATASE/METHYLTRANSFERASE PROTEIN-RELATED 8 204 IPR003697 GO:0047429(InterPro)|GO:0047429(PANTHER)
Cone8ag0810 205 SUPERFAMILY ITPase-like 9 202 IPR029001 -
Cone8ag0810 205 Gene3D - 4 203 IPR029001 -
Cone8ag0810 205 PIRSF Maf 5 205 IPR003697 GO:0047429(InterPro)
Cone8ag0810 205 Pfam Maf-like protein 10 203 IPR003697 GO:0047429(InterPro)
Cone8ag0810 205 CDD Maf 11 202 IPR003697 GO:0047429(InterPro)
Cone8ag0810 205 FunFam Maf-like protein, expressed 4 204 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag0810 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag1344 Cone-Chr17:9423162 Cone8ag0810 Cone-Chr8:8143915 3.05E-84 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g972 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone8ag0810 . . . . . Chy07g01247 . . . Bda11g01867 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001845 2 11 1 1 1 2 3 1 1 1 1 2 2 2 2 3 2 2 3 2 2 1 2 2 2 1 2 8 1 2 68