Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag0863 ATGACTCAAACCACCCCAAATCATACCCAGATTGTGTCTGGCTGGGCAGCTCATGATTCTTCCGGCAACATCACCCCTTTTACTTTTAAACGCAGAGAAAACGGCGTGAACGACGTGTCGATATCAGTTCATTACTGCGGGATATGTCATACGGATCTCCACCAAGCCAGGAACGACTGGGGCATCACCATGTATCCCATAGTCCCAGGGCATGAGATAACAGGGGTGATTACAAAAGTGGGGAGTAGCGTTGAGAGGTTCAAGATAGGAGATAGAGTAGGGGTGGGATGCTTGGCTGCTTCTTGTTTGGACTGTGAGTTTTGCAAGGAGTCTCAAGAGAACTACTGTGACAAACTTCAGTTTACTTACAACGGCATTTTCTGGGACGGCAGTATTACTTACGGCGGCTACTCCAAGCTCTTGGTTGCAGATCACAGGTACGTGGTGCATATTCCGTCAAATTTGCCGATGGATGCAGCGGCGCCGCTGCTGTGTGCGGGGATAACGGTGTTCAGCCCCATGAGAGACCACAACTTGCATGAATCGAGCGGTAAAAGAATTGGCATCGTGGGTCTAGGGGGGTTGGGCCACGTGGCAGTCAAGTTCGGGAAGGCATTTGGTCATCACGTGACGGTCATAAGCACCTCTCCGGGTAAAGAGCAGGAGGCCCAACAACGATTGGGAGCAGACCGTTTTATCCTCAGCAGTAATGCTCAACAGATGCAGGCAGGGATGAGAAGCCTAGATCTTATACTGGACACGGTATCGGGCCCGCACTCCATTGGGCCCATCTTGGAATTGCTCAAAGTAAACGGGACACTCGCTGTTGTCGGAGCTCCGGAAAAGCCCATGGAGTTGCCTTCTTTCCCTCTTATATTTGGGAAGAGGGCGGTAAAGGGGAGTATAATAGGAGGCATAAAGGAAACGCAAGAGATGATGGATTTGTGTGGAAAGCATAACATTACTTGCGATATAGAGATCATCAAGCCTAATCAAATCAATGAAGCCATGGACCGACTTGCTAGAAATGATGTGCGCTATCGTTTTGTGATTGATATTGCTGATCGCTCCTCTAAGCTTTGA 1083 49.31 MTQTTPNHTQIVSGWAAHDSSGNITPFTFKRRENGVNDVSISVHYCGICHTDLHQARNDWGITMYPIVPGHEITGVITKVGSSVERFKIGDRVGVGCLAASCLDCEFCKESQENYCDKLQFTYNGIFWDGSITYGGYSKLLVADHRYVVHIPSNLPMDAAAPLLCAGITVFSPMRDHNLHESSGKRIGIVGLGGLGHVAVKFGKAFGHHVTVISTSPGKEQEAQQRLGADRFILSSNAQQMQAGMRSLDLILDTVSGPHSIGPILELLKVNGTLAVVGAPEKPMELPSFPLIFGKRAVKGSIIGGIKETQEMMDLCGKHNITCDIEIIKPNQINEAMDRLARNDVRYRFVIDIADRSSKL 360
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 8528538 8530337 - Conep08aG0088900.1 Cone8ag0863 443412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag0863 360 PANTHER ALDEHYDE REDUCTASE 7 354 IPR047109 GO:0009809(PANTHER)|GO:0016616(InterPro)|GO:0016616(PANTHER)|GO:0045551(PANTHER)
Cone8ag0863 360 SUPERFAMILY GroES-like 18 179 IPR011032 -
Cone8ag0863 360 Gene3D - 166 323 - -
Cone8ag0863 360 Pfam Zinc-binding dehydrogenase 194 316 IPR013149 -
Cone8ag0863 360 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 70 84 IPR002328 GO:0008270(InterPro)|GO:0016491(InterPro)
Cone8ag0863 360 FunFam probable cinnamyl alcohol dehydrogenase 15 175 - -
Cone8ag0863 360 FunFam Cinnamyl alcohol dehydrogenase 166 323 - -
Cone8ag0863 360 Gene3D - 15 353 - -
Cone8ag0863 360 SMART PKS_ER_names_mod 19 351 IPR020843 GO:0016491(InterPro)
Cone8ag0863 360 Pfam Alcohol dehydrogenase GroES-like domain 37 152 IPR013154 -
Cone8ag0863 360 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 321 IPR036291 -
Cone8ag0863 360 CDD CAD1 14 352 IPR047109 GO:0016616(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone8ag0199 Cone-Chr8:1053508 Cone8ag0863 Cone-Chr8:8528538 5.20E-138 dispersed
Cone8ag0577 Cone-Chr8:4644864 Cone8ag0863 Cone-Chr8:8528538 5.20E-118 dispersed
Cone8ag0863 Cone-Chr8:8528538 Cone8ag1104 Cone-Chr8:9854077 1.36E-117 dispersed
Cone12ag0828 Cone-Chr12:7509169 Cone8ag0863 Cone-Chr8:8528538 1.96E-29 wgd
Cone4ag1996 Cone-Chr4:13952663 Cone8ag0863 Cone-Chr8:8528538 1.80E-218 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag0863 K00083 - rcu:8267819 608.601