Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag0870 ATGTTATCAAATTTAATGAGCTTTCTAAGGGCATGCTGGAGGGCTTCCTCCGACCAATATATTCACCCAAGTCCGGAGTCTGCTGGACGGCAAGAGGGATTACTCTGGTATAAGGACACTGGGCAGCACGTCAATGGTGATTTCTCAATGGCTGTCGTTCAAGCCAATAATTTGCTAGAGGATCAGAGCCAGGTCGAGTCTGGTCCCTTGAGCTTGCTCGAGTCGGGCCCATATGGCACCTTTGTTGGAGTTTACGATGGCCATGGTGGACCCGAAACATCACGATACATCTATGACAATTTATTCCAACATCTGAAAAGGTTCACCTCTGAACAGCAATCAATGTCAGTGGATGTGATAAGAAAAGCATTTCAAGCAACAGAGGAGGGGTTTATGTCTATAGTGACTAAACAATGGCCCACTAATCCTCAACTTGCAGCCGTTGGATCTTGCTGCCTGGTTGGTGTGGTTTGTGGTGGGACGCTTTACATTGCAAATGTCGGAGATTCCCGTGCCGTGCTCGGGAGGCTTGTTAGGGTGACAGGTGAGGTTCTTGCCGTTCAGTTATCGGCGGAACATAACGCAAGCATAGAATCCATTAGGCAAGAGATGCAGTCTTTGCATCCAGATGACCCACGGATAGTAGTTCTAAAGCATAATGTATGGCGAGTAAAGGGATTGATACAGGTGACTAGATCCATTGGTGATGTGTATCTAAAAAAGGCTGAATTTAACAAGGAGCCTTTGTTTCCCAAGTTTCGACTTAGGGAATCCTTCAGTAAGCCAATTTTGAGCTCCGAACCCTCCACTTTGGTTCAAGAACTACAAGCTGAAGATCAATTTCTCATATTTGCTTCTGATGGACTATGGGAGCACCTTACTAACCAGGATGCAGTTGATATAGTTCAAAATCATCCACGTAGTGGAAGTGCAAGGCGGCTCGTGAAAACTGCATTGCTAGAGGCAGCTAAGAAAAGAGAAATGCGGTATTCAGATTTAAAGAAAATCGACCGTGGGGTCCGCCGCCATTTTCACGATGACATCACGGTCATCATCCTGTTCCTCGATTCCAATCTTGTGAGCCGTGCCAGCTCAGCTAGAGGCCCTGTCTTGTCTGTAAGAGGAGGTGGTGTTAACCTACCCGCAAAATCTCTAGCTCCTTGTTCCACCCCAATCGAAAAAGATTCTGTCCAATGA 1197 46.45 MLSNLMSFLRACWRASSDQYIHPSPESAGRQEGLLWYKDTGQHVNGDFSMAVVQANNLLEDQSQVESGPLSLLESGPYGTFVGVYDGHGGPETSRYIYDNLFQHLKRFTSEQQSMSVDVIRKAFQATEEGFMSIVTKQWPTNPQLAAVGSCCLVGVVCGGTLYIANVGDSRAVLGRLVRVTGEVLAVQLSAEHNASIESIRQEMQSLHPDDPRIVVLKHNVWRVKGLIQVTRSIGDVYLKKAEFNKEPLFPKFRLRESFSKPILSSEPSTLVQELQAEDQFLIFASDGLWEHLTNQDAVDIVQNHPRSGSARRLVKTALLEAAKKREMRYSDLKKIDRGVRRHFHDDITVIILFLDSNLVSRASSARGPVLSVRGGGVNLPAKSLAPCSTPIEKDSVQ 398
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 8576582 8580903 + Conep08aG0089600.1 Cone8ag0870 443419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag0870 398 Gene3D - 34 366 IPR036457 -
Cone8ag0870 398 SUPERFAMILY PP2C-like 56 356 IPR036457 -
Cone8ag0870 398 FunFam Phosphatase 2C family protein 36 365 - -
Cone8ag0870 398 CDD PP2Cc 48 355 IPR001932 -
Cone8ag0870 398 PANTHER PROTEIN PHOSPHATASE 40 354 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cone8ag0870 398 ProSiteProfiles PPM-type phosphatase domain profile. 47 355 IPR001932 -
Cone8ag0870 398 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169(InterPro)
Cone8ag0870 398 SMART PP2C_4 41 353 IPR001932 -
Cone8ag0870 398 Pfam Protein phosphatase 2C 80 326 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag1304 Cone-Chr13:9722631 Cone8ag0870 Cone-Chr8:8576582 1.46E-130 dispersed
Cone14ag0714 Cone-Chr14:3900353 Cone8ag0870 Cone-Chr8:8576582 1.04E-141 dispersed
Cone15ag0726 Cone-Chr15:4129871 Cone8ag0870 Cone-Chr8:8576582 1.07E-112 dispersed
Cone19ag1291 Cone-Chr19:8745634 Cone8ag0870 Cone-Chr8:8576582 1.07E-147 dispersed
Cone3ag0302 Cone-Chr3:1556709 Cone8ag0870 Cone-Chr8:8576582 1.22E-163 dispersed
Cone5ag0316 Cone-Chr5:1328554 Cone8ag0870 Cone-Chr8:8576582 6.16E-184 dispersed
Cone8ag0870 Cone-Chr8:8576582 Cone8ag1089 Cone-Chr8:9794240 1.64E-122 dispersed
Cone12ag0836 Cone-Chr12:7563588 Cone8ag0870 Cone-Chr8:8576582 2.83E-278 wgd
Cone12ag1243 Cone-Chr12:9613531 Cone8ag0870 Cone-Chr8:8576582 5.06E-213 wgd
Cone8ag0870 Cone-Chr8:8576582 Cone8ag1300 Cone-Chr8:10628497 2.09E-211 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag0870 K01102 - cit:102615075 662.914