Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone8ag0872 | ATGATGGATTTTATATCACACCTGTTTCGAATTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCCCTCGTCGTCTTTGTTGGGTAATTTCTTTGAAAGAGTTAGGGAAATCTGCGCTTACGCGATTTCTGCAATTCTGGGAAATATCTTCTCAGCGATCTTTACCCTCTTCTTTGCATTAGTGGGAACTTTGTTAGGAGCTATGACAGGAGCATTAATTGGTCAAGAAACAGAGAGCGGATTTGTCCGAGGAGCTGCTGTTGGGGCCATTTCCGGAGCAGTTTTCTCTATTGAAGTCTTCGAATCTTCACTCGTTCTTTGGAAATCCGATGATTCCGGTATAGGTTGCTTTCTCTACTTGATAGATGTTCTTGCAAGCCTCCTTAGTGGGAGGCTTGTTCGTGAGCGGATTGGTCCAGCCATGTTAAGTGCTGTACAAAGCCAAATGGGTGCTGTCGAGACGAGCTTTGATGATCTCCCAAATATTTTTGATACTGGTAGTAACAAAGGCTTGCCCGGAGATTCCGTTGAAAGGATTCCAAAGATCATGATTTCGAACAATAACAATGTAGATGCTTCTGGAGAGAAAGTTTGTTGCTCGGTTTGCCTTCAGGATTTCCAGCTCGGGGAGACGGTTAGAAGCTTACCTCATTGCCATCACATATTTCACTTACCATGCATAGATAAGTGGCTACTTACTCATGGTTCTTGCCCATTATGCAGAAGGGATCTGTGA | 735 | 43.27 | MMDFISHLFRISSSSSSSSSSPSSSLLGNFFERVREICAYAISAILGNIFSAIFTLFFALVGTLLGAMTGALIGQETESGFVRGAAVGAISGAVFSIEVFESSLVLWKSDDSGIGCFLYLIDVLASLLSGRLVRERIGPAMLSAVQSQMGAVETSFDDLPNIFDTGSNKGLPGDSVERIPKIMISNNNNVDASGEKVCCSVCLQDFQLGETVRSLPHCHHIFHLPCIDKWLLTHGSCPLCRRDL | 244 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 8586233 | 8589712 | - | Conep08aG0089800.1 | Cone8ag0872 | 443421 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone8ag0872 | 244 | CDD | RING-H2_NIPL1-like | 198 | 241 | - | - | |
Cone8ag0872 | 244 | SMART | ring_2 | 199 | 240 | IPR001841 | - | |
Cone8ag0872 | 244 | Pfam | Ring finger domain | 199 | 241 | IPR001841 | - | |
Cone8ag0872 | 244 | SUPERFAMILY | RING/U-box | 192 | 244 | - | - | |
Cone8ag0872 | 244 | Pfam | YMGG-like Gly-zipper | 59 | 94 | IPR027367 | - | |
Cone8ag0872 | 244 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 162 | 244 | IPR013083 | - | |
Cone8ag0872 | 244 | FunFam | NEP1-interacting protein-like 1 | 159 | 244 | - | - | |
Cone8ag0872 | 244 | ProSiteProfiles | Zinc finger RING-type profile. | 199 | 241 | IPR001841 | - | |
Cone8ag0872 | 244 | PANTHER | NEP1-INTERACTING PROTEIN-LIKE 2 | 31 | 243 | IPR044523 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone8ag0872 | Cone-Chr8:8586233 | Cone9ag1459 | Cone-Chr9:10819887 | 1.55E-15 | dispersed | |
Cone19ag0063 | Cone-Chr19:390709 | Cone8ag0872 | Cone-Chr8:8586233 | 5.81E-39 | transposed | |
Cone12ag0839 | Cone-Chr12:7573641 | Cone8ag0872 | Cone-Chr8:8586233 | 4.64E-143 | wgd | |
Cone8ag0872 | Cone-Chr8:8586233 | Cone9ag1634 | Cone-Chr9:11624420 | 8.97E-81 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone8ag0872 | - | - | - | 0.0 |