Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag0877 ATGGTTATTGAGGAAGACGTTGAGAGCTGCGGTAGTAGACCGACGAAATCGTCGCAGGCGAATCCGCGGCAACAGAGGCAGAAGCTTGAGGTTTATACTGAGGTGCTTCGACGAATCCAAGAATTGAATCACGAAGAAGCTCTTCTTCCGGGATTTGATGATCAGCTTTGGATCCATTTTAATCGTCTTCCTGCTCGATATGCATTGGATGTGAACGTGGAGAGAGCGGAAGATGTACTCACTCACAAGAGATTGCTGCAGTTGGCAGAATATCCTGCCAATCGTCCTGTTTTTGAAGTTCGCCTAGTGCAGGTTTATCCTGCTGCCAATGGAAACTCTATTGATTCCGTTCACTTAGATTCTTCAATGAGAGAAGATGCACAGAGTTCTTTAAATTATCCTACAAGACACGGGATCCATCCACCTCCTACCTTTGGTTCATTACATAATCTTGAGGCAGTTGCACTTCAAGCCAACAAATATCATGCTGAAGACAAAGACAGTGCTCTGAGTGTGACTCCATGTTTTTCTCGGCCTATGCACGAGATAACATTTTCAACAATTGACAAGCCTAAACTCCTTAGTCAGCTAACTTCCTTACTTGCTGAGATTGGGTTAAACATACAAGAAGCTCATGCTTTCTCTACCGTTGATGGGTTCTCTTTGGATGTCTTCGTCGTTGAGGGTTGGCCTTATGAGGAAACTGATGAGCTTAAAAGTGCATTGGAAATGGAAATTATAAACTTCAAGGAGCAGGCTGTATTAAAACAGAATTCAACTCCTGTCATTGGTGAGCATAACCAGGAAAGAGTTGAAACTATTCCTAGTTTCATAGAAATACCGACTGATGGAACTGATGTCTGGGAAATTGACACCAGACAGCTAAAAGTTGAGAACAAAGTTGGATCTGGGTCATTTGGTGATTTGTATCGAGGTACATATTGCACTCAGGAAGTGGCTATCAAGATACTGAAGCCTGAGCGTATCAATGGAGAGATGCTGAAAGAGTTCTCTCAGGAAGTTTATATCATGAGGAAAGTTCGGCACAAGAATGTTGTGCAATTTATCGGTGCATGTACTAGACCTCCAAACCTATGCATAGTGACTGAGTTTATGTCTAGAGGAAGTGTATACGACTTCCTTCATAAACAAAAAGGTGTTTTTAAGCTACCCTCGCTACTCAAAGTAGCAATTGATGTTTCTAAAGGGATGAACTACTTGCACCAAAATAATATAATTCACAGAGATCTCAAGACTGCCAATCTTCTGATGGATGAAAACGAGGTTGTTAAGGTTGCTGATTTTGGGGTTGCCAGAGTCCAAGCTCAATCTGGAGTGATGACAGCTGAAACCGGAACATACCGCTGGATGGCTCCTGAGGTCATTGAACACAAGCCCTATGATCACAAGGCAGATATCTTCAGTTTTGGAATAGCCTTGTGGGAACTTTTAACTGCAGAGATCCCTTACTCATACTTGACTCCACTACAAGCTGCAGTTGGTGTTGTGCAGAAGGGAATAAGGCCAAAAATCCCCAAGAATACTCACCCAAGGCTTGTAGAGCTGCTCGAAAAATGCTGGCAGCAAGATCCAAGTCTAAGACCAAACTTCTCTGAAATTTTAGAAAACCTTCAGCAGATAGCCGAGCAGGTTGAGAATGATGGGGAAGATCGGCACAAGAAAGATAAATCATCCGGTGGCTTCTTTTCAGCGTTTAGACGGGGACATTAA 1731 42.92 MVIEEDVESCGSRPTKSSQANPRQQRQKLEVYTEVLRRIQELNHEEALLPGFDDQLWIHFNRLPARYALDVNVERAEDVLTHKRLLQLAEYPANRPVFEVRLVQVYPAANGNSIDSVHLDSSMREDAQSSLNYPTRHGIHPPPTFGSLHNLEAVALQANKYHAEDKDSALSVTPCFSRPMHEITFSTIDKPKLLSQLTSLLAEIGLNIQEAHAFSTVDGFSLDVFVVEGWPYEETDELKSALEMEIINFKEQAVLKQNSTPVIGEHNQERVETIPSFIEIPTDGTDVWEIDTRQLKVENKVGSGSFGDLYRGTYCTQEVAIKILKPERINGEMLKEFSQEVYIMRKVRHKNVVQFIGACTRPPNLCIVTEFMSRGSVYDFLHKQKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENEVVKVADFGVARVQAQSGVMTAETGTYRWMAPEVIEHKPYDHKADIFSFGIALWELLTAEIPYSYLTPLQAAVGVVQKGIRPKIPKNTHPRLVELLEKCWQQDPSLRPNFSEILENLQQIAEQVENDGEDRHKKDKSSGGFFSAFRRGH 576
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 8624044 8630926 + Conep08aG0090300.1 Cone8ag0877 443426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag0877 576 ProSitePatterns Protein kinases ATP-binding region signature. 301 322 IPR017441 GO:0005524(InterPro)
Cone8ag0877 576 CDD ACT_TyrKc 180 246 - -
Cone8ag0877 576 ProSiteProfiles ACT domain profile. 182 262 IPR002912 -
Cone8ag0877 576 Gene3D Phosphorylase Kinase; domain 1 285 373 - -
Cone8ag0877 576 MobiDBLite consensus disorder prediction 12 26 - -
Cone8ag0877 576 FunFam Serine/threonine-protein kinase isoform 1 285 373 - -
Cone8ag0877 576 MobiDBLite consensus disorder prediction 1 26 - -
Cone8ag0877 576 FunFam serine/threonine-protein kinase HT1 374 565 - -
Cone8ag0877 576 MobiDBLite consensus disorder prediction 552 576 - -
Cone8ag0877 576 PANTHER SERINE-THREONINE PROTEIN KINASE 45 548 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Cone8ag0877 576 Gene3D Transferase(Phosphotransferase) domain 1 374 567 - -
Cone8ag0877 576 Pfam Protein tyrosine and serine/threonine kinase 295 544 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone8ag0877 576 PRINTS Tyrosine kinase catalytic domain signature 471 493 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone8ag0877 576 PRINTS Tyrosine kinase catalytic domain signature 452 462 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone8ag0877 576 PRINTS Tyrosine kinase catalytic domain signature 406 424 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone8ag0877 576 PRINTS Tyrosine kinase catalytic domain signature 369 382 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone8ag0877 576 PRINTS Tyrosine kinase catalytic domain signature 515 537 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone8ag0877 576 SUPERFAMILY Protein kinase-like (PK-like) 267 543 IPR011009 -
Cone8ag0877 576 ProSiteProfiles Protein kinase domain profile. 295 548 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone8ag0877 576 SUPERFAMILY ACT-like 180 243 IPR045865 -
Cone8ag0877 576 MobiDBLite consensus disorder prediction 552 567 - -
Cone8ag0877 576 SMART serkin_6 295 547 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone8ag0877 576 CDD STKc_MAP3K-like 301 544 - -
Cone8ag0877 576 ProSitePatterns Serine/Threonine protein kinases active-site signature. 412 424 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone8ag0877 576 Coils Coil 232 252 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag0791 Cone-Chr17:6136205 Cone8ag0877 Cone-Chr8:8624044 8.53E-168 dispersed
Cone20ag0386 Cone-Chr20:1812146 Cone8ag0877 Cone-Chr8:8624044 1.83E-167 dispersed
Cone6ag1606 Cone-Chr6:12440854 Cone8ag0877 Cone-Chr8:8624044 1.38E-50 dispersed
Cone8ag0877 Cone-Chr8:8624044 Cone9ag1008 Cone-Chr9:5263645 3.24E-69 dispersed
Cone4ag1692 Cone-Chr4:12592297 Cone8ag0877 Cone-Chr8:8624044 2.57E-45 transposed
Cone12ag0844 Cone-Chr12:7624899 Cone8ag0877 Cone-Chr8:8624044 0 wgd
Cone12ag1251 Cone-Chr12:9642935 Cone8ag0877 Cone-Chr8:8624044 9.10E-284 wgd
Cone7ag1915 Cone-Chr7:12257561 Cone8ag0877 Cone-Chr8:8624044 3.96E-232 wgd
Cone8ag0877 Cone-Chr8:8624044 Cone8ag1306 Cone-Chr8:10645628 9.25E-121 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83123 PF13456 RVT_3 9.50E-22 CL0219 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag0877 - - - 0.0