Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone8ag0889 | ATGGATATTTACGTTGAGAACAATCCTAACTTGATCAAACCCACTAATTTTTCAGGGAATATGGAAGGAAGGAAATTTGGGCAGGAGATTAGTAACAAAAGGAGGGCATTAGGTGTTATTAATCAGAATGTGGGAATTCAAGCTAGCAAGAGAGCTTTATCTGGAAAACATGAAATGGGTGAAAAGAAGCAAGCTGATCCATTACATAGACCAATTACCAGAAAGTTCGCTGCAGTAATTTCAAAAAGTCAGCCACTTTGTCCCCAGGAAAGCAACAAGCTGAAGATAAACGAATCAGTAGATTCGATCTCTATATATATAGATGAAGATTGCAAGGCATCAAAAGAATACCATCCAATAATTCCCATGTTCTTAGAAGAAGCAGATGAAGCCATTATTCAGGAGGTTGAAATGGATGATATAGAAGAAGAAGAAAAAGAAGAAGAAGAAGAAGAGCCTGTTATAGATATAGACGGATGTGATGCAAAGAACCCACTTGTAGTTGTTGATTATGTGGATGATCTTTATGCATTTTACAGAAAGATGGAGGTTCATAACTGTGTTTTACCAATTTACATGGAGCAACAGTTTGACATTAATGAGAGGATGAGGGCCATATTGATTGACTGGCTTATTGAGGTGCATGACAAGTTTGAATTGATGGGAGAGACATTGTTTCTAACAGTGAACATAATAGACAGATTTCTGGCCCAACAGACAGTGGTGAGAAAGAAGCTTCAGCTAGTAGGACTAGTTGCTTTGCTCTTGGCTTGCAAATATGAAGAGGTTTCTGTTCCCATTGTAGAGGACTTGGTCCTTATTTCAGACAAAGCTTACTCTAGACAAGAAGTCCTTGAAATGGAGACACTCATGCTCAACAAACTACAGTTCAACATGTCAGTTCCAACTCCATATGTCTTCATGCAAAGGTTCCTCAAGGCTAGTACAACTAATACTACTCAGTCCGAGAAGAAGAAGCTAGAGCTACTATCCTTCTTCTTGATAGAGCTTTCATTGGTTGAGTATGAAATGATCAAGTTCTCTCCTTCTTTATTAGCTGCTGCTGCTATCTACACCGCTCAGTGCACTCTTCATGGGTTTAAGCAGCAGTGGAGCCGGACCTGTGAATGGCATTCCGGCTACTCTCAAGACAAGCTATTAGAATGTTCAAGAATGATGGTGGGTTTTCACAAGAAGGCAGCAACAGGGAAATTGACAGGAGTGTATAGGAAGTATAGTACATCAAAGCATTCATATACTTCAAGAAGTGAGGCAGCTTGTTTTCTTTTGGAGACACGAGAAATATAA | 1308 | 39.3 | MDIYVENNPNLIKPTNFSGNMEGRKFGQEISNKRRALGVINQNVGIQASKRALSGKHEMGEKKQADPLHRPITRKFAAVISKSQPLCPQESNKLKINESVDSISIYIDEDCKASKEYHPIIPMFLEEADEAIIQEVEMDDIEEEEKEEEEEEPVIDIDGCDAKNPLVVVDYVDDLYAFYRKMEVHNCVLPIYMEQQFDINERMRAILIDWLIEVHDKFELMGETLFLTVNIIDRFLAQQTVVRKKLQLVGLVALLLACKYEEVSVPIVEDLVLISDKAYSRQEVLEMETLMLNKLQFNMSVPTPYVFMQRFLKASTTNTTQSEKKKLELLSFFLIELSLVEYEMIKFSPSLLAAAAIYTAQCTLHGFKQQWSRTCEWHSGYSQDKLLECSRMMVGFHKKAATGKLTGVYRKYSTSKHSYTSRSEAACFLLETREI | 435 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 8686330 | 8689212 | - | Conep08aG0091500.1 | Cone8ag0889 | 443438 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone8ag0889 | 435 | PIRSF | Cyclin_A_B_D_E | 7 | 434 | IPR046965 | GO:0016538(InterPro)|GO:0044772(InterPro) | |
Cone8ag0889 | 435 | FunFam | G2/mitotic-specific cyclin-1 | 296 | 421 | - | - | |
Cone8ag0889 | 435 | FunFam | G2/mitotic-specific cyclin | 188 | 295 | - | - | |
Cone8ag0889 | 435 | Pfam | Cyclin, N-terminal domain | 174 | 300 | IPR006671 | - | |
Cone8ag0889 | 435 | Coils | Coil | 131 | 151 | - | - | |
Cone8ag0889 | 435 | Gene3D | - | 174 | 421 | - | - | |
Cone8ag0889 | 435 | CDD | CYCLIN_AtCycB-like_rpt2 | 302 | 419 | - | - | |
Cone8ag0889 | 435 | Gene3D | - | 188 | 300 | - | - | |
Cone8ag0889 | 435 | SMART | Cyclin_C_2 | 302 | 426 | IPR004367 | - | |
Cone8ag0889 | 435 | Pfam | Cyclin, C-terminal domain | 302 | 423 | IPR004367 | - | |
Cone8ag0889 | 435 | PANTHER | CYCLINS | 146 | 413 | IPR039361 | GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER) | |
Cone8ag0889 | 435 | SUPERFAMILY | Cyclin-like | 301 | 422 | IPR036915 | - | |
Cone8ag0889 | 435 | SMART | cyclin_7 | 306 | 395 | IPR013763 | - | |
Cone8ag0889 | 435 | SMART | cyclin_7 | 209 | 293 | IPR013763 | - | |
Cone8ag0889 | 435 | ProSitePatterns | Cyclins signature. | 204 | 235 | IPR048258 | - | |
Cone8ag0889 | 435 | SUPERFAMILY | Cyclin-like | 163 | 299 | IPR036915 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone8ag0889 | Cone-Chr8:8686330 | Cone9ag1624 | Cone-Chr9:11579755 | 1.64E-92 | dispersed | |
Cone12ag0860 | Cone-Chr12:7712167 | Cone8ag0889 | Cone-Chr8:8686330 | 3.59E-39 | transposed | |
Cone12ag0859 | Cone-Chr12:7710310 | Cone8ag0889 | Cone-Chr8:8686330 | 8.01E-191 | wgd | |
Cone17ag1451 | Cone-Chr17:9849759 | Cone8ag0889 | Cone-Chr8:8686330 | 5.19E-135 | wgd | |
Cone20ag0025 | Cone-Chr20:155965 | Cone8ag0889 | Cone-Chr8:8686330 | 5.89E-116 | wgd | |
Cone4ag2018 | Cone-Chr4:14050059 | Cone8ag0889 | Cone-Chr8:8686330 | 4.18E-136 | wgd | |
Cone6ag1701 | Cone-Chr6:12844184 | Cone8ag0889 | Cone-Chr8:8686330 | 2.70E-171 | wgd | |
Cone7ag1934 | Cone-Chr7:12340108 | Cone8ag0889 | Cone-Chr8:8686330 | 2.20E-148 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone8ag0889 | K21777 | - | rcu:8268759 | 519.235 |