Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag0893 ATGGCAATGGAGGAAACTTGCAAAGGGAATAATACTACTAATTCTCATCGGCTGAGAAATTCGCCTCTACTTGATTTGGACCTCAATTTTCTTCCTTCCTCAGATGATATGTCTGAAGATTCTGAGGATCAACGGAACGAATCCGTCACGTTACCAGGTGGAGATGTAGGTGTGATAGAGAATAAGAAAAAGAGGGCAGGAAAAGAACACATTGCAAAAATTGAATTATCGGATCTTGCCAAGTATTTTGACGTGCCTATTATCGAGGCTTCAAGAAGTCTCAATGTTGGGCTAACTGTATTGAAAAGGAAATGCAGAGAATTAGGCATTCCTCGTTGGCCTCACAGGAAGATCAAATCCCTTGACGGTTTAATCCGTGATCTACAGGAAGAGGCGAAACAGCAAGAGCAGGATGACAAGGCAGCTGTTGCTGTGGCAAAGAGAAAGAAGATATTGGAGAGTGAAAAGGCGAGGATTGAGAGGACACCCATCATTGACTTACAGATTGAGACCAAGAAATTCAGACAAGATGTTTTCAAGAGAAGGTATAGGGCTAGAGCTCTTAGAAATCAGGGCATATCCATTTCTAGTTAG 594 42.09 MAMEETCKGNNTTNSHRLRNSPLLDLDLNFLPSSDDMSEDSEDQRNESVTLPGGDVGVIENKKKRAGKEHIAKIELSDLAKYFDVPIIEASRSLNVGLTVLKRKCRELGIPRWPHRKIKSLDGLIRDLQEEAKQQEQDDKAAVAVAKRKKILESEKARIERTPIIDLQIETKKFRQDVFKRRYRARALRNQGISISS 197
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 8705777 8708598 - Conep08aG0091900.1 Cone8ag0893 443442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag0893 197 Pfam RWP-RK domain 73 121 IPR003035 -
Cone8ag0893 197 MobiDBLite consensus disorder prediction 1 20 - -
Cone8ag0893 197 PANTHER PROTEIN RKD4 49 191 IPR044607 GO:0003700(InterPro)
Cone8ag0893 197 MobiDBLite consensus disorder prediction 34 56 - -
Cone8ag0893 197 Coils Coil 118 138 - -
Cone8ag0893 197 ProSiteProfiles RWP-RK domain profile. 56 141 IPR003035 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone2ag0843 Cone-Chr2:34429850 Cone8ag0893 Cone-Chr8:8705777 2.47E-23 dispersed
Cone14ag0006 Cone-Chr14:49551 Cone8ag0893 Cone-Chr8:8705777 6.35E-19 transposed
Cone12ag0864 Cone-Chr12:7730896 Cone8ag0893 Cone-Chr8:8705777 4.19E-125 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
46691 PF01966 HD 3.60E-12 CL0237 Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag0893 - - - 0.0