Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone8ag0893 | ATGGCAATGGAGGAAACTTGCAAAGGGAATAATACTACTAATTCTCATCGGCTGAGAAATTCGCCTCTACTTGATTTGGACCTCAATTTTCTTCCTTCCTCAGATGATATGTCTGAAGATTCTGAGGATCAACGGAACGAATCCGTCACGTTACCAGGTGGAGATGTAGGTGTGATAGAGAATAAGAAAAAGAGGGCAGGAAAAGAACACATTGCAAAAATTGAATTATCGGATCTTGCCAAGTATTTTGACGTGCCTATTATCGAGGCTTCAAGAAGTCTCAATGTTGGGCTAACTGTATTGAAAAGGAAATGCAGAGAATTAGGCATTCCTCGTTGGCCTCACAGGAAGATCAAATCCCTTGACGGTTTAATCCGTGATCTACAGGAAGAGGCGAAACAGCAAGAGCAGGATGACAAGGCAGCTGTTGCTGTGGCAAAGAGAAAGAAGATATTGGAGAGTGAAAAGGCGAGGATTGAGAGGACACCCATCATTGACTTACAGATTGAGACCAAGAAATTCAGACAAGATGTTTTCAAGAGAAGGTATAGGGCTAGAGCTCTTAGAAATCAGGGCATATCCATTTCTAGTTAG | 594 | 42.09 | MAMEETCKGNNTTNSHRLRNSPLLDLDLNFLPSSDDMSEDSEDQRNESVTLPGGDVGVIENKKKRAGKEHIAKIELSDLAKYFDVPIIEASRSLNVGLTVLKRKCRELGIPRWPHRKIKSLDGLIRDLQEEAKQQEQDDKAAVAVAKRKKILESEKARIERTPIIDLQIETKKFRQDVFKRRYRARALRNQGISISS | 197 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 8705777 | 8708598 | - | Conep08aG0091900.1 | Cone8ag0893 | 443442 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone8ag0893 | 197 | Pfam | RWP-RK domain | 73 | 121 | IPR003035 | - | |
Cone8ag0893 | 197 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Cone8ag0893 | 197 | PANTHER | PROTEIN RKD4 | 49 | 191 | IPR044607 | GO:0003700(InterPro) | |
Cone8ag0893 | 197 | MobiDBLite | consensus disorder prediction | 34 | 56 | - | - | |
Cone8ag0893 | 197 | Coils | Coil | 118 | 138 | - | - | |
Cone8ag0893 | 197 | ProSiteProfiles | RWP-RK domain profile. | 56 | 141 | IPR003035 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone2ag0843 | Cone-Chr2:34429850 | Cone8ag0893 | Cone-Chr8:8705777 | 2.47E-23 | dispersed | |
Cone14ag0006 | Cone-Chr14:49551 | Cone8ag0893 | Cone-Chr8:8705777 | 6.35E-19 | transposed | |
Cone12ag0864 | Cone-Chr12:7730896 | Cone8ag0893 | Cone-Chr8:8705777 | 4.19E-125 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
46691 | PF01966 | HD | 3.60E-12 | CL0237 | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone8ag0893 | - | - | - | 0.0 |