Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag0899 ATGCATTGGTTGCAGCCTGGAGGGAGCTTGGATGGTTTAAAATCAAGTGAAGTAGAGCCACGTCTGGTATTCCATTATGGGATTCCATCAGGTTCTACTAAGTTCGCTTATGACTCTGTTCAAAAGATTCTTGCTCTTTCTACTAAGGATGGAAGGCTAAAGTTACTTGGAAAGGATAACACTCAGGTTCTACTGGAATCTAATGAGGCAGTGCCCAGCAAGTTTTTGACGTTCATTGAGAATCAGGGCTTACTTCTTAACGTAACTTTGAAGAACCACATCGAGGTTTGGGACATTGAAAAGAGGGCGCTATTTCATGTGCATGTTTTCGAAAAAGAAATAACATCTTTCGCGATCATGCAATGTAGCCCTTATATGTATGCTGGAGATTCTGGTGGTAACGTTTTAATTTTGAAGCTTGAGCAAGAATCATGTAATGTAGTTGAGATGAAATACACCATACCCCTATCCGCTTCGCACAGAAATTCAACTGAAGTTGCTGAGGATACTGTTGTAACCCATGTGCTACCCCAGCCAATGGCTGAAACTAAAAGGGTGCTTATAATACTCAAAGAATGGCCTAATGACCTTATGGGATATTCGAGAAAGCAAATCCATTTTTACCACAGGTGCAATGGAGAGATTTCGATATGGAGCATTCTTTCTGCCCAAAATCCAGATGTTGAAGCAGCAACAGAGAGTAAAACTCATACTGCTCCCTTATTTAAACTCAATCTTGGATATAAGTCAGAAAAAATACCTATTTCATTTTTGAGGTGGGCTTATGCTGATGGGAAAGCAAGTCGACTCTATGTTACAGGGGCCTCTGACATGTCTGCAAATTCGTTGCACGTAATTTTATTGAATGAGCATACCGAATCTCGCACAATAAAGTTGGGGCTTCAGTTGCCTGAGCAGTGTATTGACATGGAAACCATTTCAAGCCCTACTGATCAAAGCAAGCATAAGCAATATTTTTTACTTTTGCTTGGCAAATCAGGACAAGTTTACGCTTATGATGATTGCTTGATTGAAAAATATCTCCTGCAATCCCAATCCAGATCGCCATTTTCACTCCCGAAGGAGGTCATGGTGAAGATGCCGTTTGCTGACTCAAGCATCACAGTGGCAAAATTCATCACAAATGATTCCAGTGTGTTGGGCTCTTCAGAAGAGGATTACAATCTGCTGATTAAAAGTGTTCCTTCACTCCTCTTTCCGGAGACAAAAGGGAAAGATGGGAATTACTCGAATACAGCCCAATTTAGTGGATTTTCAACGGTCGACAACTTGTACATAACTGGACATATTAATGGAGCCATTAATTTCTGGGATGCATCATGTCCAATTTTTATCCCAGTTTTTTCATTAGATCAACAGAGTGAGGATGATTATTCTTTAAGTGGTAGAGCGGTGACCGCTTTGTACTTTGATGGCAATTCTCGGCTTCTTGTTTCTGGAGATCATGGTGGAATGGTTCGCATCTTTGGATTTCAACCAGAACCATATGCTGCTGACAATGGTTTTATGTCTTTCCAAGGAAGTTCAAGGAAACGGAATAATCACATCATCCAGAGTGTCAATCTTGTCAAAGTTGATGGTTCCATACTAACCATGAATTTAAGCGGTAACTCAAGGCATCTTGCTGTTGGCACTGATCAAGGATATGTATCAGTAATTGATATGCAAGGGTATAATATAATTTATCAAAGACATACTGCAAGTGAAATATGCACTGGAATCGTTGATGTGCAGTTTGAAAGCTGCTGGGTGCATGGTTTTGAGAAAAATATCCTAGCTGTTGCCACAAGAGATTCATCCATTTTTGCTCTTGATAGCGATACTGGGACCACACTAAATCCAATCGCAGCATGGTTCGTCCCAAGAAACCCTCTAGGGCCCTTCTCATGCAGATTTTGGCTGAAACATTGCACTGAAAATGTATTCGCATGTTCTGAAGACGGACACAGTACACCAGTTAGAGGACTAAACACATCAGATGGTCTAGAATCGGGCAAAAGTAGCCTTGCTATGGATTCTACACAAAAGCAGTTGTTGATACTGTTATGTTCTGAGAAAGCTGTATATCTCTACTCCTTGTCCCATGCCATTCAGGGAATTAAGAAGGTACACTGCAAGAAGAAATTTTCATCCTCTTTATGTTGCTGGACCTCAACATTCAACAGTCCAACCGATGTCGGCCTTATGCTTCTTTTCAATACTGGAAAACTTGAAATAAGATCTATACCGGAGCTTTCTCTCATAAAGGAGACTTCTATAAGAGGCTTATCATATTCGCCTTCAAAGCCAAAGTCATTACCGGATATTTCTGTATGTTCTTCACGGGATGGAGATCTTATTCTGGCAAATGGTGATCAAGAATTTATGCTCGTCTCAGTATTGTTCCACAAGAAAGTATTCAGGCTTTTGGACACTATCAGTCAGATCTACAGGAAAGATTTGATGCCTTTACAAGAAGGGCATGTTTCTGTGCCAATCATTCATAAGGAAAAGAAAAAGGGTATATTTAGCTCAGTTATGAAAGAAATTACTGGCAGCAAAGCAAAGCCAATGTCGGAAGTGGAAACAGAAGATACTAGAGAATCCATTGAAGAACTATCAACAATCTTTTCAACTGTTAACTTTCAATGTGATATTGAAAGGAAAGAAAATAAAGATATTCTTGGTGTGGATGAATATGAGACTGGCCCAGACATAGATGACATTGATCTTGACGATCCCAGAGAAAATCCCAAAGAGCAAAATATGTTGGGTGCTCTTAATAAACAAAAATTGGCAAACAAGTTTAATGCGCTGAAAGGAAAATTGAAACAGATGACAGAGAAAAAATCCCCCAAGGAAGAAGAGCAGCTAGACATCAAATCAAATGATAAACCGTGTTCTGTTGATCAAATTAAGAGGAAATATGGGTTTTCACCGTCCACTGAATCAAGTGTTGCCAAGATGACAGAAAGCAAGCTGCAGGAGAATATTGCTAGACTGCAGGGAATCAACCTAAGAGCAACAGATATGCAAGACAAAGCCAAGTCATTTTCATCAATGGCAAATGAATTACTACGAACTGCTGAAAAGGGTAATCGTTAA 3105 39.84 MHWLQPGGSLDGLKSSEVEPRLVFHYGIPSGSTKFAYDSVQKILALSTKDGRLKLLGKDNTQVLLESNEAVPSKFLTFIENQGLLLNVTLKNHIEVWDIEKRALFHVHVFEKEITSFAIMQCSPYMYAGDSGGNVLILKLEQESCNVVEMKYTIPLSASHRNSTEVAEDTVVTHVLPQPMAETKRVLIILKEWPNDLMGYSRKQIHFYHRCNGEISIWSILSAQNPDVEAATESKTHTAPLFKLNLGYKSEKIPISFLRWAYADGKASRLYVTGASDMSANSLHVILLNEHTESRTIKLGLQLPEQCIDMETISSPTDQSKHKQYFLLLLGKSGQVYAYDDCLIEKYLLQSQSRSPFSLPKEVMVKMPFADSSITVAKFITNDSSVLGSSEEDYNLLIKSVPSLLFPETKGKDGNYSNTAQFSGFSTVDNLYITGHINGAINFWDASCPIFIPVFSLDQQSEDDYSLSGRAVTALYFDGNSRLLVSGDHGGMVRIFGFQPEPYAADNGFMSFQGSSRKRNNHIIQSVNLVKVDGSILTMNLSGNSRHLAVGTDQGYVSVIDMQGYNIIYQRHTASEICTGIVDVQFESCWVHGFEKNILAVATRDSSIFALDSDTGTTLNPIAAWFVPRNPLGPFSCRFWLKHCTENVFACSEDGHSTPVRGLNTSDGLESGKSSLAMDSTQKQLLILLCSEKAVYLYSLSHAIQGIKKVHCKKKFSSSLCCWTSTFNSPTDVGLMLLFNTGKLEIRSIPELSLIKETSIRGLSYSPSKPKSLPDISVCSSRDGDLILANGDQEFMLVSVLFHKKVFRLLDTISQIYRKDLMPLQEGHVSVPIIHKEKKKGIFSSVMKEITGSKAKPMSEVETEDTRESIEELSTIFSTVNFQCDIERKENKDILGVDEYETGPDIDDIDLDDPRENPKEQNMLGALNKQKLANKFNALKGKLKQMTEKKSPKEEEQLDIKSNDKPCSVDQIKRKYGFSPSTESSVAKMTESKLQENIARLQGINLRATDMQDKAKSFSSMANELLRTAEKGNR 1034
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 8730311 8736459 - Conep08aG0092500.1 Cone8ag0899 443448

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag0899 1034 CDD R-SNARE_STXBP5_6 971 1027 - -
Cone8ag0899 1034 Pfam Lethal giant larvae(Lgl) like, C-terminal 547 811 IPR013905 -
Cone8ag0899 1034 SUPERFAMILY WD40 repeat-like 212 498 IPR036322 GO:0005515(InterPro)
Cone8ag0899 1034 Coils Coil 929 949 - -
Cone8ag0899 1034 PANTHER LETHAL 2 GIANT LARVAE PROTEIN 204 1031 - GO:0005096(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0017157(PANTHER)|GO:0019905(PANTHER)|GO:0045159(PANTHER)
Cone8ag0899 1034 SUPERFAMILY WD40 repeat-like 595 793 IPR036322 GO:0005515(InterPro)
Cone8ag0899 1034 SUPERFAMILY WD40 repeat-like 29 656 IPR036322 GO:0005515(InterPro)
Cone8ag0899 1034 Gene3D - 507 807 IPR015943 GO:0005515(InterPro)
Cone8ag0899 1034 Gene3D - 197 502 IPR015943 GO:0005515(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag0899 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag1667 Cone-Chr1:57837181 Cone8ag0899 Cone-Chr8:8730311 6.76E-27 dispersed
Cone12ag0870 Cone-Chr12:7755393 Cone8ag0899 Cone-Chr8:8730311 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g1197 Blo04g00862 . . . Bpe15g00498 . . . . . . . . . . . . . . . . . . . . . . . . . . Cone8ag0899 Cone12ag0870 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005820 1 5 1 0 1 1 1 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 1 3 1 39