Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag0901 ATGATGGAGTGGGAAAAACCAGAACAGCACCAATTCCAGCAGCACAGGGAGGAGCTGGTAGCGGTGAACAACAATGGGAGTGGCGGCGTGAATTTGAACGGGAATGGAGGAAGCTTGTACGTGAAGGTGATGACTGATGAGCAATTGGAGACTCTTCGGAAGCAGATTGCGGTTTACGCTACTATTTGTGAGCAGCTCGTTGAGATGCATAAGACCCTCACTTCTCACCAAGATCTTGCTGGAATCAGGCTAGGGAGCCCTTACTGCGAACCCCTAATGATATCAAGCGGCCACAAAATCACTTCAAGACAACGATGGACTCCAACCTCTGTCCAGCTCCAAATTCTCGAGAGAATATTCGATCAAGGAACAGGCACTCCAAGCAAGCAAAAGATCAAAGAGATAACCTCGGAACTAAGCCAACACGGCCAAATCTCTGAAACCAACGTCTATAACTGGTTCCAGAACAGGCGGGCTCGGTCCAAAAGGAAGCAGCAAAACACGGCACCAAACAATGTTGAATCTGAAGTGGAGACAGATACTGAGTCGCCCAAGGATAAGAAGACTAATCCACAAGAATTTCAATCTCAGCAAAACTCAGCTCCTCCTAGCGCTGATGATCTCGGTTTTCAAAGCCCTGAAATAAGTTCTGACCTTCATTTCTTGGATTCTCCGACCAGTAAGGCGGAGACTATGTTTCTTTTGAATGGAGGTTTAAAGCCCGGAAGAAATTTGGGTCAAATGTCTTTCTATGATGGGCATGAGCATCTTGTTGGAAAGATGGAAGTCCCGGAAAGATATGGTCTTTATTCGAATGCAGACGGCTACAATATGTCGGGATGA 843 46.62 MMEWEKPEQHQFQQHREELVAVNNNGSGGVNLNGNGGSLYVKVMTDEQLETLRKQIAVYATICEQLVEMHKTLTSHQDLAGIRLGSPYCEPLMISSGHKITSRQRWTPTSVQLQILERIFDQGTGTPSKQKIKEITSELSQHGQISETNVYNWFQNRRARSKRKQQNTAPNNVESEVETDTESPKDKKTNPQEFQSQQNSAPPSADDLGFQSPEISSDLHFLDSPTSKAETMFLLNGGLKPGRNLGQMSFYDGHEHLVGKMEVPERYGLYSNADGYNMSG 280
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 8752098 8754410 + Conep08aG0092700.1 Cone8ag0901 443450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag0901 280 CDD homeodomain 103 165 IPR001356 GO:0003677(InterPro)
Cone8ag0901 280 MobiDBLite consensus disorder prediction 190 206 - -
Cone8ag0901 280 SUPERFAMILY Homeodomain-like 102 166 IPR009057 -
Cone8ag0901 280 MobiDBLite consensus disorder prediction 158 216 - -
Cone8ag0901 280 ProSiteProfiles 'Homeobox' domain profile. 99 164 IPR001356 GO:0003677(InterPro)
Cone8ag0901 280 SMART HOX_1 101 168 IPR001356 GO:0003677(InterPro)
Cone8ag0901 280 Gene3D - 104 170 - -
Cone8ag0901 280 PANTHER WUSCHEL-RELATED HOMEOBOX 13 28 279 IPR044559 GO:0003700(InterPro)
Cone8ag0901 280 Pfam Homeodomain 103 163 IPR001356 GO:0003677(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0872 Cone-Chr12:7779041 Cone8ag0901 Cone-Chr8:8752098 1.72E-181 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
46693 None None None None Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag0901 - - - 0.0