Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag0921 ATGTCATGGCAGCAGCAGCCAGAGTTGGATCCTGTATCTCATCGCGGCAGAGAAGGTGGAGGAGCTGCACCGACTGAACCGTCGCCATCTTCCACAATTTCCGAGGTCGAAGAAAAGCCTTCGACGTTGTTGACGTCATCATCACCTTATCCATCTCCGACTACTTCTACCCCGCCACCTCTCTCATGGCCCCCGGACGGCGAGCTCACTCTCGAATGGATCCAAGGTCTCACGAGCCTCTTCGAGTGGTCTTCCAGGAACCTGCCTCCGTCCGATCTCCCGTCCGTATTGTCGGTTTCTGTATTCGATAAACTCGTTCTCTCTGCCTCGAGAATCCTCCACAGAGAACCTAATTGTCTTAGGATTCTTGATGATTATGCGCCTGATGATTCCGTCGTCGTCGTCGTCGGAGATGTTCATGGCCAATTGCATGATCTCATGTTTCTCATGCAAGATGCTGGATTTCCGTCTGAAAATCGGTTTTTCGTATTTAATGGAGATTACGTTGATAGAGGAGCTTGGGGCCTCGAAACCTTCTTGCTCCTATTGGCTTGGAAGGTCTTTATGCCAGACCAAGTATTTCTTCTTCGTGGAAACCATGAATCCAAGTACTGCACATCTGTGTACGGATTTGAGAAGGAAGTACTGACGAAGTATGGAGTAGATAAAGGAAAGCATGTTTATAGGAAATGTTTGGGATGCTTTGAAGGTCTGCCTTTGGCATCCATTATTGCTGGACGAGTATATACAGCTCATGGAGGGCTTTTCCGCAGCATTATTATCCCTCCATCAAAAAGATCAAAAGGAAAGAAAAATCGAAGAATAACTATTGCTGCCGAAGCCAGCTCAGTGTTATCACTTGGTTCTTTGGAGGAACTATCTAAAGCTAGGAGATCAGTGCTTGACCCGCCATGGGAGGGCATAAATTTGATTCCTGGAGATGTGCTCTGGTCAGATCCCTCTATGAATCCTGGTCTTTCTCCAAATAAAGAGAGAGGCATAGGTCTGCTTTGGGGTCCTGATTGCACTGAAGAATTCTTAAAGAAATACGATCTAAAGCTAATAATCAGATCCCATGAAGGTCCAGATGCTAGGGAGAAGAGGCCTGGTCTTGGAGGAATGGATAAAGGTTACACCATAGACCATGTAGTAGAGTCGGGGAAGTTAATAACTGTCTTTAGTGCTCCAGATTACCCCCAGTTTCAGGCTACGGTGGGGAGGTACAAAAATAAAGGTGCATACATAGTTTTGGAGCCACCTACTTACGACATTCCGGTGTTTCATAGTTTTGAAGCTATTACTCCAAGACCGAAGGTTAATCCCTATTATGATTTTGAAGATGTGATCGATTCTGATGAAGAATTGGACTTGACATCAATGGTAACAGACAGTACATGA 1398 45.78 MSWQQQPELDPVSHRGREGGGAAPTEPSPSSTISEVEEKPSTLLTSSSPYPSPTTSTPPPLSWPPDGELTLEWIQGLTSLFEWSSRNLPPSDLPSVLSVSVFDKLVLSASRILHREPNCLRILDDYAPDDSVVVVVGDVHGQLHDLMFLMQDAGFPSENRFFVFNGDYVDRGAWGLETFLLLLAWKVFMPDQVFLLRGNHESKYCTSVYGFEKEVLTKYGVDKGKHVYRKCLGCFEGLPLASIIAGRVYTAHGGLFRSIIIPPSKRSKGKKNRRITIAAEASSVLSLGSLEELSKARRSVLDPPWEGINLIPGDVLWSDPSMNPGLSPNKERGIGLLWGPDCTEEFLKKYDLKLIIRSHEGPDAREKRPGLGGMDKGYTIDHVVESGKLITVFSAPDYPQFQATVGRYKNKGAYIVLEPPTYDIPVFHSFEAITPRPKVNPYYDFEDVIDSDEELDLTSMVTDST 465
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 8891620 8895056 + Conep08aG0094700.1 Cone8ag0921 443470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag0921 465 PRINTS Serine/threonine phosphatase family signature 162 189 IPR006186 GO:0016787(InterPro)
Cone8ag0921 465 PRINTS Serine/threonine phosphatase family signature 195 219 IPR006186 GO:0016787(InterPro)
Cone8ag0921 465 PRINTS Serine/threonine phosphatase family signature 132 159 IPR006186 GO:0016787(InterPro)
Cone8ag0921 465 PRINTS Serine/threonine phosphatase family signature 233 259 IPR006186 GO:0016787(InterPro)
Cone8ag0921 465 PRINTS Serine/threonine phosphatase family signature 388 404 IPR006186 GO:0016787(InterPro)
Cone8ag0921 465 PRINTS Serine/threonine phosphatase family signature 294 321 IPR006186 GO:0016787(InterPro)
Cone8ag0921 465 MobiDBLite consensus disorder prediction 25 51 - -
Cone8ag0921 465 MobiDBLite consensus disorder prediction 1 65 - -
Cone8ag0921 465 CDD MPP_PP7 63 444 IPR041754 -
Cone8ag0921 465 Gene3D - 94 460 IPR029052 -
Cone8ag0921 465 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 41 456 IPR051134 -
Cone8ag0921 465 Pfam Calcineurin-like phosphoesterase 133 360 IPR004843 GO:0016787(InterPro)
Cone8ag0921 465 SUPERFAMILY Metallo-dependent phosphatases 96 434 IPR029052 -
Cone8ag0921 465 ProSitePatterns Serine/threonine specific protein phosphatases signature. 196 201 IPR006186 GO:0016787(InterPro)
Cone8ag0921 465 SMART pp2a_7 97 422 IPR006186 GO:0016787(InterPro)
Cone8ag0921 465 FunFam Serine/threonine-protein phosphatase 81 458 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone18ag0453 Cone-Chr18:2207524 Cone8ag0921 Cone-Chr8:8891620 1.10E-138 dispersed
Cone1ag1287 Cone-Chr1:56254101 Cone8ag0921 Cone-Chr8:8891620 4.60E-136 dispersed
Cone5ag0273 Cone-Chr5:1156254 Cone8ag0921 Cone-Chr8:8891620 1.00E-125 dispersed
Cone8ag0921 Cone-Chr8:8891620 Cone8ag1565 Cone-Chr8:11695438 2.01E-50 dispersed
Cone12ag0888 Cone-Chr12:7879112 Cone8ag0921 Cone-Chr8:8891620 5.31e-315 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag0921 K04460 - csv:116402529 686.026