Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag0963 ATGGCATCAATTTCAGCTACTAATTCCGACAACAATGATCTTGTAAAACAACCAGAAGATCACACCCAGATAGAAAATCTAGAAGTAGAGGTGATCGACTACACTGGACGGGCGCAATGGCTCCGAGCCGCCGTCTTAGGAGCCAACGACGGCTTACTCTCTACCGCATCGTTGATGATGGGTGTTGGAGCCGTCAGACAGGATCACAAGACAATGATTCTGTCTGGGATCGCTGGACTCATCGGTGGAGCATGTAGTATGGCAATTGGAGAGTACGTGTCTGTTTACTCGCAGTACGATATTGAGGTTGCACAGATCAAGCGGAAAGGTAGAGAGATTAAAGGAGACGAGAAATTGCCGAGCCCGGTAAAGGCCGCAGTCGCCTCTGCGATCGCTTTTGCGGTTGGAGCTACGGTGCCTTTGCTCGGAGCAGCTTTTATAAGTAGCTATAAGGTGAGGTTGGGAGTGGTGGTTGGGGTCGTTGCCGTTGCCTTGTTTGTTTTCGGGTGGCTCGGTGCAGTTCTCGGGAAGGCTCCGAAGCTGAAGTCGTCTTTGAGAGTTTTGTTCGGGGGTTTGATGGCCATGGCTATCACTTTTGGTTTAACCAAGCTTGTTGGTACTTCTGGTCTTTGA 633 50.08 MASISATNSDNNDLVKQPEDHTQIENLEVEVIDYTGRAQWLRAAVLGANDGLLSTASLMMGVGAVRQDHKTMILSGIAGLIGGACSMAIGEYVSVYSQYDIEVAQIKRKGREIKGDEKLPSPVKAAVASAIAFAVGATVPLLGAAFISSYKVRLGVVVGVVAVALFVFGWLGAVLGKAPKLKSSLRVLFGGLMAMAITFGLTKLVGTSGL 210
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 9112981 9113613 - Conep08aG0099100.1 Cone8ag0963 443512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag0963 210 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 10 206 IPR008217 GO:0005381(PANTHER)|GO:0005384(PANTHER)|GO:0005384(InterPro)|GO:0006880(PANTHER)|GO:0016020(PANTHER)|GO:0030026(PANTHER)|GO:0030026(InterPro)
Cone8ag0963 210 MobiDBLite consensus disorder prediction 1 20 - -
Cone8ag0963 210 Pfam VIT family 116 202 IPR008217 GO:0005384(InterPro)|GO:0030026(InterPro)
Cone8ag0963 210 Pfam VIT family 41 116 IPR008217 GO:0005384(InterPro)|GO:0030026(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag0789 Cone-Chr17:6104243 Cone8ag0963 Cone-Chr8:9112981 4.98E-63 dispersed
Cone20ag0384 Cone-Chr20:1797722 Cone8ag0963 Cone-Chr8:9112981 5.40E-78 dispersed
Cone4ag1505 Cone-Chr4:11702118 Cone8ag0963 Cone-Chr8:9112981 6.34E-77 dispersed
Cone7ag1445 Cone-Chr7:10230273 Cone8ag0963 Cone-Chr8:9112981 4.11E-80 dispersed
Cone8ag0963 Cone-Chr8:9112981 Cone8ag0983 Cone-Chr8:9195614 1.16E-73 dispersed
Cone8ag0963 Cone-Chr8:9112981 Cone8ag0966 Cone-Chr8:9122882 8.75E-140 proximal
Cone12ag0931 Cone-Chr12:8143135 Cone8ag0963 Cone-Chr8:9112981 1.90E-120 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag0963 K22736 - mtr:11415258 239.58