Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag0976 ATGGACGCCAAGCAAAAGCGACCCCGTCTACGGCCAAAACTCGATCGCCGGAATGCCATCAGAAACATAGACTACGAAGTCTCCACTTCTTCTTCTTCTACTACTTCTTCAACTTCCGATCTTCGAACTCGCGCGCTCGAACTTTACGAGACCAGCTTCAGAGTGAAAGGAATCGACGGTGAAATGGATCTCATATGCCAATTACTAGGGCTTTCTGGTCCTGACGACTTTTCGATTTCCACTGCAGATTGGGAAGCACAAAAGGCACGGTCTCCATCCGCTTTTGCTTCTCGCTCCAAACCGCCAACACATTGCGATTCAGCTAAGCCGAAGCTCGATGAAGTCGTTTCTCAGGTAAAAGACTATTCTCCAGCTCAATCTCCACCTGAGGCAAGGCTTAATCAGGTAAACAGCTCGAACTTAGCTGCTGGATTTGAAAACAGACTGAGGTTAGGTGATGATGACGCGTTACTAGCTCGGGATTTTGGGGGACGAGGCGTTAATGGCGTTCCGCCCCCAATTCTTTCGCCTCCTCCTGGAATATACCGTCCAGCCGTCGATCACGCGAGCTCTACGTGGGATATATTTAATTCGTTTGCTCCTCCAGGCGATAAACTGTTAACTTATTCCCATAAATTTGGAAATACTTGTTCTTCAGATAAAGAGGAGGGCCGAGTAATTGAAAACAATGACAAATGTAACGTAGTCAGTGAAAGGAAAGAGTTTACTCATCTGAAAAATAGTGAAAATGATAATCGTGGTCATGTTTCTGGCATTGTTGTTGAGCCGGTACATAATACTTCTCATAATGGGAGATTCAGACGCAGAATTTCCGGACCATGGCAGAAGGGTAAACTGCTGGGACGTGGGTCTTTTGGAGCCGTTTATGAGGCCTTCACCGACGAAGGATTCTTTTTCGCTGTAAAGGAGGTTTCCTTACTTGATCAAGGAAGCCAAGGCAAGCAGAGCATTCTCCAGCTTGAGCAGGAGATTTCTCTTTTGAGTCAGTTTGAACATGAGAATATAGTTCAGTATCTTGGCACAGAGAAGGATGAAACTACGCTTTACATCTTCCTTGAGCTTGTGACAAAAGGATCACTAGCAAGCCTCTATCAAAGCTATCACTTGAAGGATTCTCAAGTCTCTTTCTATACCTGGCAGATTCTGCACGGTTTAAATTATCTTCATGATCAGAATGTGGTTCACAGGGATATCAAATGTGCCAACATATTGGTCAATGTATACGGAAATGTGAAACTTGCAGATTTTGGGTTGGCAAAGGCAGCCAAATTAAATGACGTGAAATCGTGTAAAGGTTCACCATATTGGATGGCTCCTGAGATTGTTAATGAAAAGAACCATGGTTACGGACTTGCAGCTGACATATGGAGTCTTGGGTGTACTGTGTTTGAGATGTTAAACCGTCAGCCTCCTTACTCTGAGTTGGAAGGCGTGCAGGCATTATTTATGATCGGCAGGAATATACTTCCCCCCCTTCCTAATTCCATATCCAGAGAAGCCCGGGATTTCATTCTCAGTTGTTTGCAAGTTAATCCTAGTGATAGGCCTACAGCAGGTCAGTTAATAGATCATCCATTTCTTAGAAGTGTTCATCCTTCTCCTCGTTGCAATGGAATGTCTTGA 1644 44.53 MDAKQKRPRLRPKLDRRNAIRNIDYEVSTSSSSTTSSTSDLRTRALELYETSFRVKGIDGEMDLICQLLGLSGPDDFSISTADWEAQKARSPSAFASRSKPPTHCDSAKPKLDEVVSQVKDYSPAQSPPEARLNQVNSSNLAAGFENRLRLGDDDALLARDFGGRGVNGVPPPILSPPPGIYRPAVDHASSTWDIFNSFAPPGDKLLTYSHKFGNTCSSDKEEGRVIENNDKCNVVSERKEFTHLKNSENDNRGHVSGIVVEPVHNTSHNGRFRRRISGPWQKGKLLGRGSFGAVYEAFTDEGFFFAVKEVSLLDQGSQGKQSILQLEQEISLLSQFEHENIVQYLGTEKDETTLYIFLELVTKGSLASLYQSYHLKDSQVSFYTWQILHGLNYLHDQNVVHRDIKCANILVNVYGNVKLADFGLAKAAKLNDVKSCKGSPYWMAPEIVNEKNHGYGLAADIWSLGCTVFEMLNRQPPYSELEGVQALFMIGRNILPPLPNSISREARDFILSCLQVNPSDRPTAGQLIDHPFLRSVHPSPRCNGMS 547
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 9169745 9174341 + Conep08aG0100400.1 Cone8ag0976 443525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag0976 547 ProSiteProfiles Protein kinase domain profile. 281 534 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone8ag0976 547 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 93 536 IPR050538 -
Cone8ag0976 547 MobiDBLite consensus disorder prediction 90 110 - -
Cone8ag0976 547 MobiDBLite consensus disorder prediction 23 40 - -
Cone8ag0976 547 ProSitePatterns Serine/Threonine protein kinases active-site signature. 400 412 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone8ag0976 547 Gene3D Transferase(Phosphotransferase) domain 1 280 543 - -
Cone8ag0976 547 SUPERFAMILY Protein kinase-like (PK-like) 265 541 IPR011009 -
Cone8ag0976 547 ProSitePatterns Protein kinases ATP-binding region signature. 287 309 IPR017441 GO:0005524(InterPro)
Cone8ag0976 547 MobiDBLite consensus disorder prediction 1 40 - -
Cone8ag0976 547 SMART serkin_6 281 534 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone8ag0976 547 Pfam Protein kinase domain 282 534 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone8ag0976 547 MobiDBLite consensus disorder prediction 1 22 - -
Cone8ag0976 547 FunFam Mitogen-activated protein kinase 1, putative, expressed 279 544 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag1261 Cone-Chr17:9077026 Cone8ag0976 Cone-Chr8:9169745 3.39E-142 dispersed
Cone20ag0467 Cone-Chr20:2449845 Cone8ag0976 Cone-Chr8:9169745 3.58E-141 dispersed
Cone4ag1372 Cone-Chr4:11134160 Cone8ag0976 Cone-Chr8:9169745 3.70E-170 dispersed
Cone7ag1559 Cone-Chr7:10715928 Cone8ag0976 Cone-Chr8:9169745 1.72E-170 dispersed
Cone8ag0112 Cone-Chr8:570627 Cone8ag0976 Cone-Chr8:9169745 3.17E-64 dispersed
Cone8ag0976 Cone-Chr8:9169745 Cone9ag1239 Cone-Chr9:9076150 4.03E-75 dispersed
Cone12ag0942 Cone-Chr12:8202842 Cone8ag0976 Cone-Chr8:9169745 4.05E-124 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83128 PF01603 B56 2.90E-190 CL0020 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag0976 K13414 - mdm:103416359 527.709